MGE detailed information
MGE type: Prophage MGE length: 47294 bp
Accession: NZ_CP068821 Location: 2752860..2800153 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Accession: NZ_CP068821 Location: 2752860..2800153 Organism: Escherichia coli strain RIVM_C029952 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN43_RS13245 () | 2748910..2749893 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| JNN43_RS13250 () | 2750371..2751744 | + | 1374 | WP_001551034.1 | ATP-dependent RNA helicase DbpA | - |
| JNN43_RS13255 () | 2751873..2752808 | - | 936 | WP_000662472.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| JNN43_RS13260 () | 2752860..2754095 | - | 1236 | WP_001551035.1 | Inner membrane protein YnjF ; Integrase | Integrase |
| JNN43_RS13265 () | 2754097..2754312 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| JNN43_RS13270 () | 2754412..2754600 | - | 189 | WP_001551036.1 | DUF1187 family protein | - |
| - () | 2754416..2754594 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2754416..2754594 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2754416..2754594 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2754416..2754594 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| JNN43_RS13275 () | 2754593..2754787 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| JNN43_RS13280 () | 2754844..2755653 | - | 810 | WP_001551037.1 | recombination protein RecT | - |
| JNN43_RS13285 () | 2755646..2758297 | - | 2652 | WP_001551038.1 | exodeoxyribonuclease VIII | - |
| JNN43_RS13290 () | 2758399..2758674 | - | 276 | WP_001314664.1 | hypothetical protein | - |
| JNN43_RS13295 () | 2758749..2758919 | - | 171 | WP_001551041.1 | phage protein | - |
| JNN43_RS13300 () | 2758919..2759140 | - | 222 | WP_000560221.1 | killing protein KilR | - |
| JNN43_RS13305 () | 2759561..2759713 | - | 153 | WP_001551042.1 | DUF1391 family protein | - |
| JNN43_RS13310 () | 2760167..2760643 | - | 477 | WP_001551043.1 | DNA-binding transcriptional repressor RacR | - |
| JNN43_RS13315 () | 2760767..2761063 | + | 297 | WP_001551044.1 | toxin YdaS | - |
| JNN43_RS13320 () | 2761086..2761508 | + | 423 | WP_001551045.1 | phage protein | - |
| JNN43_RS13325 () | 2761521..2762417 | + | 897 | WP_202851939.1 | DUF1376 domain-containing protein | - |
| JNN43_RS13330 () | 2762386..2763132 | + | 747 | WP_001551047.1 | ATP-binding protein | - |
| JNN43_RS13335 () | 2763155..2763916 | + | 762 | WP_001551048.1 | DUF1627 domain-containing protein | - |
| JNN43_RS13340 () | 2763932..2764363 | + | 432 | WP_001403739.1 | DUF977 family protein | - |
| JNN43_RS13345 () | 2764558..2765712 | + | 1155 | WP_202851940.1 | ATP-binding protein | - |
| JNN43_RS13350 () | 2765687..2767951 | + | 2265 | WP_001551050.1 | S8 family peptidase | - |
| JNN43_RS13355 () | 2768365..2768964 | + | 600 | WP_000940316.1 | DUF1367 family protein | - |
| JNN43_RS13360 () | 2768964..2769254 | + | 291 | WP_001551052.1 | DUF1364 domain-containing protein | - |
| JNN43_RS13365 () | 2769251..2769793 | + | 543 | WP_000640136.1 | DUF1133 family protein | - |
| JNN43_RS13380 () | 2771075..2771290 | + | 216 | WP_000839599.1 | phage lysis protein EssD | - |
| JNN43_RS13385 () | 2771290..2771787 | + | 498 | WP_001135280.1 | lysozyme RrrD | - |
| JNN43_RS13390 () | 2772004..2772189 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| JNN43_RS13395 () | 2772386..2773843 | + | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| JNN43_RS13400 () | 2773981..2774772 | + | 792 | WP_001291094.1 | ParB/Srx family N-terminal domain-containing protein | - |
| JNN43_RS13405 () | 2774765..2775697 | + | 933 | WP_202851941.1 | hypothetical protein | - |
| JNN43_RS13410 () | 2775633..2775884 | + | 252 | WP_000613571.1 | hypothetical protein | - |
| JNN43_RS13415 () | 2775888..2776982 | + | 1095 | WP_001551055.1 | terminase small subunit | - |
| JNN43_RS13420 () | 2776963..2778265 | + | 1303 | Protein_2622 | terminase family protein | - |
| JNN43_RS13425 () | 2778268..2779674 | + | 1407 | WP_001551056.1 | DUF4055 domain-containing protein | - |
| JNN43_RS13430 () | 2779658..2780770 | + | 1113 | WP_001363932.1 | hypothetical protein | - |
| JNN43_RS13435 () | 2780875..2781639 | + | 765 | WP_001551057.1 | hypothetical protein | - |
| JNN43_RS13440 () | 2781738..2782877 | + | 1140 | WP_000918487.1 | hypothetical protein | - |
| JNN43_RS13445 () | 2782920..2783096 | + | 177 | WP_000908084.1 | hypothetical protein | - |
| JNN43_RS13450 () | 2783100..2783495 | + | 396 | WP_000634214.1 | hypothetical protein | - |
| JNN43_RS13455 () | 2783495..2783878 | + | 384 | WP_001551058.1 | hypothetical protein | - |
| JNN43_RS13460 () | 2783879..2784259 | + | 381 | WP_001551059.1 | hypothetical protein | - |
| JNN43_RS13465 () | 2784256..2784648 | + | 393 | WP_000673077.1 | hypothetical protein | - |
| JNN43_RS13470 () | 2784675..2785637 | + | 963 | WP_001551060.1 | hypothetical protein | - |
| JNN43_RS13475 () | 2785788..2786147 | + | 360 | WP_122452218.1 | hypothetical protein | - |
| JNN43_RS13480 () | 2786619..2789117 | + | 2499 | WP_060579026.1 | phage tail length tape measure family protein | - |
| JNN43_RS13485 () | 2789121..2789852 | + | 732 | WP_077634177.1 | phage tail tape measure protein | - |
| JNN43_RS13490 () | 2789845..2790183 | + | 339 | WP_000024051.1 | phage tail protein | - |
| JNN43_RS13495 () | 2790183..2790881 | + | 699 | WP_001152425.1 | phage minor tail protein L | - |
| JNN43_RS13500 () | 2790887..2791630 | + | 744 | WP_032147653.1 | C40 family peptidase | - |
| JNN43_RS13505 () | 2791567..2792175 | + | 609 | WP_050436738.1 | tail assembly protein | - |
| JNN43_RS13510 () | 2792236..2795715 | + | 3480 | WP_202851942.1 | host specificity protein J | - |
| JNN43_RS13515 () | 2795783..2796382 | + | 600 | WP_001542091.1 | Long-chain-fatty-acid--CoA ligase | VF |
| JNN43_RS13520 () | 2796447..2798822 | + | 2376 | WP_202851943.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JNN43_RS13525 () | 2798822..2799103 | + | 282 | WP_000654143.1 | hypothetical protein | - |
| JNN43_RS13530 () | 2799113..2800153 | + | 1041 | WP_001551067.1 | tail fiber domain-containing protein | - |
| JNN43_RS13535 () | 2800196..2800489 | + | 294 | WP_000355602.1 | hypothetical protein | - |
| JNN43_RS13540 () | 2800509..2800628 | + | 120 | Protein_2646 | tail fiber assembly protein | - |
| JNN43_RS13545 () | 2800841..2801698 | - | 858 | WP_000968130.1 | iron/manganese ABC transporter permease subunit SitD | - |
| JNN43_RS13550 () | 2801695..2802552 | - | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| JNN43_RS13555 () | 2802549..2803376 | - | 828 | WP_000983720.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| JNN43_RS13560 () | 2803376..2804290 | - | 915 | WP_000286867.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|