MGE detailed information
MGE type: Prophage MGE length: 86436 bp
Accession: NZ_CP068820 Location: 305689..392124 Organism: Escherichia coli strain RIVM_C029951 Replicon: chromosome
Accession: NZ_CP068820 Location: 305689..392124 Organism: Escherichia coli strain RIVM_C029951 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN41_RS01600 () | 302737..303708 | - | 972 | WP_000564730.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| JNN41_RS01605 () | 303705..304448 | - | 744 | WP_000019591.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| JNN41_RS01610 () | 304489..304884 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| JNN41_RS01615 () | 304937..305707 | - | 771 | WP_042196262.1 | DUF72 domain-containing protein | - |
| JNN41_RS01620 () | 305689..307002 | - | 1314 | WP_000362005.1 | Putative defective protein IntQ ; Integrase | Integrase |
| JNN41_RS01625 () | 307058..307294 | - | 237 | WP_000528718.1 | excisionase family protein | - |
| JNN41_RS01630 () | 307303..307449 | - | 147 | WP_016248041.1 | hypothetical protein | - |
| JNN41_RS01635 () | 307453..307695 | - | 243 | WP_000457723.1 | DUF4222 domain-containing protein | - |
| JNN41_RS01640 () | 307780..308724 | - | 945 | WP_000628767.1 | hypothetical protein | - |
| JNN41_RS01645 () | 309058..309236 | - | 179 | Protein_320 | hypothetical protein | - |
| JNN41_RS01650 () | 309238..309837 | - | 600 | WP_113465277.1 | ead/Ea22-like family protein | - |
| JNN41_RS01655 () | 309834..310073 | - | 240 | WP_000476207.1 | hypothetical protein | - |
| JNN41_RS01660 () | 310066..310269 | - | 204 | WP_000111289.1 | hypothetical protein | - |
| JNN41_RS01665 () | 310266..310628 | - | 363 | WP_001242713.1 | phage protein | - |
| JNN41_RS01670 () | 310619..311155 | - | 537 | WP_021524339.1 | 5'-deoxynucleotidase | - |
| JNN41_RS01675 () | 311283..312107 | - | 825 | WP_000081287.1 | DUF2303 family protein | - |
| JNN41_RS01680 () | 312173..312535 | - | 363 | WP_000135682.1 | hypothetical protein | - |
| JNN41_RS01685 () | 313238..313930 | - | 693 | WP_001345148.1 | helix-turn-helix transcriptional regulator | - |
| JNN41_RS01690 () | 314028..314288 | + | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| JNN41_RS01695 () | 314281..314832 | + | 552 | WP_023138546.1 | hypothetical protein | - |
| JNN41_RS01700 () | 314829..315977 | + | 1149 | WP_202859651.1 | Rha family phage regulatory protein | - |
| JNN41_RS01705 () | 315974..316198 | + | 225 | WP_000620697.1 | hypothetical protein | - |
| JNN41_RS01710 () | 316195..317013 | + | 819 | WP_000061519.1 | helix-turn-helix domain-containing protein | - |
| JNN41_RS01715 () | 317010..317504 | + | 495 | WP_072252179.1 | PerC family transcriptional regulator | - |
| JNN41_RS01720 () | 317504..318157 | + | 654 | WP_001305610.1 | phage N-6-adenine-methyltransferase | - |
| JNN41_RS01725 () | 318154..318480 | + | 327 | WP_202859652.1 | LexA family transcriptional regulator | - |
| JNN41_RS01730 () | 318477..318866 | + | 390 | WP_202859653.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JNN41_RS01735 () | 318886..319683 | + | 798 | WP_001061403.1 | KilA-N domain-containing protein | - |
| JNN41_RS01740 () | 319691..320680 | + | 990 | WP_001379493.1 | DUF968 domain-containing protein | - |
| JNN41_RS01745 () | 320694..321446 | + | 753 | WP_202859654.1 | antitermination protein | - |
| JNN41_RS01750 () | 321735..321977 | + | 243 | WP_001306866.1 | hypothetical protein | - |
| JNN41_RS01755 () | 322109..322450 | + | 342 | WP_202859655.1 | phage holin, lambda family | - |
| JNN41_RS01760 () | 322454..322930 | + | 477 | WP_145768676.1 | glycoside hydrolase family protein | - |
| JNN41_RS01765 () | 322914..323306 | + | 393 | WP_202859656.1 | DUF2570 domain-containing protein | - |
| JNN41_RS01770 () | 323809..324243 | + | 435 | WP_033868734.1 | hypothetical protein | - |
| JNN41_RS01775 () | 324371..324721 | + | 351 | WP_202859657.1 | HNH endonuclease | - |
| JNN41_RS01780 () | 324848..325342 | + | 495 | WP_000929183.1 | phage terminase small subunit P27 family | - |
| JNN41_RS01785 () | 325576..327072 | + | 1497 | WP_202859683.1 | terminase large subunit | - |
| JNN41_RS01790 () | 327084..327266 | + | 183 | WP_000605606.1 | hypothetical protein | - |
| JNN41_RS01795 () | 327266..328507 | + | 1242 | WP_016236636.1 | phage portal protein | - |
| JNN41_RS01800 () | 328485..329135 | + | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| JNN41_RS01805 () | 329150..330355 | + | 1206 | WP_000257507.1 | phage major capsid protein | - |
| JNN41_RS01810 () | 330405..330605 | + | 201 | WP_000601365.1 | hypothetical protein | - |
| JNN41_RS01815 () | 330608..330931 | + | 324 | WP_000927710.1 | head-tail connector protein | - |
| JNN41_RS01820 () | 330928..331338 | + | 411 | WP_202859658.1 | phage head closure protein | - |
| JNN41_RS01825 () | 331313..331819 | + | 507 | WP_000224836.1 | hypothetical protein | - |
| JNN41_RS01830 () | 331816..332376 | + | 561 | WP_000779296.1 | hypothetical protein | - |
| JNN41_RS01835 () | 332385..332555 | + | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| JNN41_RS01840 () | 332539..334035 | + | 1497 | WP_202859659.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| JNN41_RS01845 () | 334035..334391 | + | 357 | WP_000090997.1 | phage tail tube protein | - |
| JNN41_RS01850 () | 334391..334660 | + | 270 | WP_000661051.1 | phage tail assembly protein | - |
| JNN41_RS01855 () | 334802..336634 | + | 1833 | WP_202859660.1 | phage tail tape measure protein | - |
| JNN41_RS01860 () | 336716..337228 | + | 513 | WP_001439754.1 | hypothetical protein | - |
| JNN41_RS01865 () | 337319..338647 | + | 1329 | WP_116980421.1 | DNA circularization N-terminal domain-containing protein | - |
| JNN41_RS01870 () | 338644..339723 | + | 1080 | WP_116980420.1 | baseplate protein | - |
| JNN41_RS01875 () | 339723..340271 | + | 549 | WP_202859661.1 | phage baseplate assembly protein V | - |
| JNN41_RS01880 () | 340271..340696 | + | 426 | WP_021551553.1 | phage GP46 family protein | - |
| JNN41_RS01885 () | 340683..341741 | + | 1059 | WP_116980418.1 | baseplate J/gp47 family protein | - |
| JNN41_RS01890 () | 341732..342316 | + | 585 | WP_021551551.1 | YmfQ family protein | - |
| JNN41_RS01895 () | 342320..342616 | + | 297 | Protein_370 | hypothetical protein | - |
| JNN41_RS01900 () | 342830..345175 | + | 2346 | Protein_371 | hypothetical protein | - |
| JNN41_RS01905 () | 345178..345465 | + | 288 | WP_202859662.1 | hypothetical protein | - |
| JNN41_RS01910 () | 345583..345831 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| JNN41_RS01915 () | 346186..346752 | - | 567 | WP_001551241.1 | hydrolase | - |
| JNN41_RS01920 () | 347062..348834 | + | 1773 | WP_001551240.1 | aspartate--tRNA ligase | - |
| JNN41_RS01925 () | 348952..349404 | + | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
| JNN41_RS01930 () | 349433..350173 | + | 741 | WP_000907234.1 | putative transcriptional regulatory protein YebC | VF |
| JNN41_RS01935 () | 350208..350729 | + | 522 | WP_001551239.1 | crossover junction endodeoxyribonuclease RuvC | - |
| JNN41_RS01940 () | 350731..351333 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| JNN41_RS01945 () | 351404..351469 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| JNN41_RS01950 () | 351608..352219 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| JNN41_RS01955 () | 352228..353238 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| JNN41_RS01960 () | 353388..354173 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| JNN41_RS01965 () | 354170..354925 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| JNN41_RS01970 () | 355004..355936 | + | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| JNN41_RS01975 () | 355952..357274 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| JNN41_RS01980 () | 357394..358365 | + | 972 | WP_001551238.1 | Lipid A biosynthesis myristoyltransferase | VF |
| JNN41_RS01985 () | 358497..359939 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| JNN41_RS01990 () | 360067..360936 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| JNN41_RS01995 () | 361274..362749 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| JNN41_RS02000 () | 362984..364795 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| JNN41_RS02005 () | 364832..365473 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN41_RS02010 () | 365528..366706 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN41_RS02015 () | 366840..367130 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN41_RS02020 () | 367197..367553 | + | 357 | WP_001295500.1 | protein YebF | - |
| JNN41_RS02025 () | 367880..368539 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| JNN41_RS02030 () | 368703..369872 | - | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN41_RS02035 () | 369929..370354 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN41_RS02040 () | 370511..372571 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| JNN41_RS02045 () | 372568..373230 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN41_RS02050 () | 373254..373910 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JNN41_RS02055 () | 374012..374242 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN41_RS02060 () | 374381..374755 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JNN41_RS02065 () | 374759..375631 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| JNN41_RS02070 () | 375644..375985 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 376013..376284 | - | 272 | - | - | Antitoxin Detail |
| - () | 376143..376246 | + | 104 | - | - | Toxin Detail |
| JNN41_RS02075 () | 376381..377037 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| JNN41_RS02080 () | 377038..377229 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JNN41_RS02085 () | 377334..377570 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN41_RS02090 () | 377688..379127 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN41_RS02095 () | 379207..381840 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JNN41_RS02100 () | 381809..383092 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| JNN41_RS02105 () | 383222..383719 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| JNN41_RS02110 () | 383816..384514 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN41_RS02115 () | 384534..386582 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN41_RS02120 () | 386774..387655 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JNN41_RS02125 () | 387701..389074 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| JNN41_RS02130 () | 389251..390042 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN41_RS02135 () | 390186..390425 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JNN41_RS02140 () | 390584..390727 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN41_RS02145 () | 390802..391089 | + | 288 | WP_001006855.1 | YebO family protein | - |
| JNN41_RS02150 () | 391759..391902 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JNN41_RS02155 () | 391915..392124 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN41_RS02160 () | 392290..393099 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN41_RS02165 () | 393096..393662 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN41_RS02170 () | 394091..394549 | - | 459 | WP_076797520.1 | DUF986 family protein | - |
| JNN41_RS02175 () | 394604..395455 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN41_RS02180 () | 395468..396268 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|