MGE detailed information
MGE type: Genomic_island MGE length: 45375 bp
Accession: NZ_CP068819 Location: 4644567..4689941 Organism: Escherichia coli strain RIVM_C029042 Replicon: chromosome
Accession: NZ_CP068819 Location: 4644567..4689941 Organism: Escherichia coli strain RIVM_C029042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN65_RS22480 () | 4640086..4641282 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JNN65_RS22485 () | 4641567..4641848 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JNN65_RS22490 () | 4641870..4642655 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JNN65_RS22495 () | 4642716..4644233 | + | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| JNN65_RS22500 () | 4644257..4644556 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JNN65_RS22505 () | 4644567..4645142 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JNN65_RS22510 () | 4645191..4647743 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JNN65_RS22515 () | 4647852..4648769 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JNN65_RS22520 () | 4648906..4649811 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| JNN65_RS22525 () | 4650423..4650792 | + | 370 | Protein_4410 | reverse transcriptase/maturase | - |
| JNN65_RS22530 () | 4650792..4651385 | + | 594 | Protein_4411 | maturase | - |
| JNN65_RS22535 () | 4651968..4653197 | + | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JNN65_RS22540 () | 4653214..4654269 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| JNN65_RS22545 () | 4654398..4655549 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JNN65_RS22550 () | 4655594..4656139 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JNN65_RS22555 () | 4656496..4656841 | - | 346 | Protein_4416 | hypothetical protein | VF |
| JNN65_RS22560 () | 4657273..4657970 | - | 698 | Protein_4417 | IS1 family transposase IS1R | Transposase |
| JNN65_RS22565 () | 4658027..4658239 | - | 213 | Protein_4418 | hypothetical protein | VF |
| JNN65_RS22570 () | 4658360..4659517 | - | 1158 | Protein_4419 | Multidrug resistance protein MdtB | VF |
| JNN65_RS22575 () | 4659608..4659874 | + | 267 | Protein_4420 | IS3 family transposase IS2 | Transposase |
| JNN65_RS22580 () | 4659936..4660161 | - | 226 | Protein_4421 | hypothetical protein | - |
| JNN65_RS22585 () | 4660173..4660406 | - | 234 | WP_000958486.1 | AlpA family transcriptional regulator | - |
| JNN65_RS22590 () | 4660475..4661050 | - | 576 | Protein_4423 | hypothetical protein | - |
| JNN65_RS22595 () | 4661297..4661863 | - | 567 | WP_060579145.1 | inovirus-type Gp2 protein | - |
| JNN65_RS22600 () | 4663164..4664258 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| JNN65_RS22605 () | 4664277..4665527 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| JNN65_RS22610 () | 4665611..4666546 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JNN65_RS22615 () | 4666539..4667474 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JNN65_RS22620 () | 4668010..4668462 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JNN65_RS22625 () | 4668983..4669714 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| JNN65_RS22630 () | 4671167..4672390 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| JNN65_RS22635 () | 4672491..4673375 | + | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| JNN65_RS22640 () | 4673578..4674258 | + | 681 | WP_021515201.1 | WYL domain-containing protein | - |
| JNN65_RS22645 () | 4674409..4675086 | + | 678 | WP_060579144.1 | hypothetical protein | - |
| JNN65_RS22650 () | 4675092..4675325 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| JNN65_RS22655 () | 4675415..4676233 | + | 819 | WP_001175155.1 | DUF945 domain-containing protein | - |
| JNN65_RS22660 () | 4676499..4676978 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| JNN65_RS22665 () | 4676993..4677469 | + | 477 | WP_001186193.1 | RadC family protein | - |
| JNN65_RS22670 () | 4677556..4677777 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| JNN65_RS22675 () | 4677857..4678225 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN65_RS22680 () | 4678314..4678691 | + | 378 | WP_000854820.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| JNN65_RS22685 () | 4678688..4678885 | + | 198 | Protein_4442 | hypothetical protein | - |
| JNN65_RS22690 () | 4678913..4679110 | + | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| JNN65_RS22695 () | 4679195..4679755 | + | 561 | Protein_4444 | DUF4942 domain-containing protein | - |
| JNN65_RS22700 () | 4680590..4682128 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN65_RS22705 () | 4682494..4683828 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN65_RS22710 () | 4683908..4686055 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN65_RS22715 () | 4686114..4687571 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN65_RS22720 () | 4687808..4689325 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN65_RS22725 () | 4689444..4689617 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JNN65_RS22730 () | 4689645..4689941 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JNN65_RS22735 () | 4690170..4690442 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN65_RS22740 () | 4690454..4690684 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN65_RS22745 () | 4690864..4692495 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JNN65_RS22750 () | 4692492..4693211 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|