MGE detailed information
MGE type: Prophage MGE length: 36444 bp
Accession: NZ_CP068818 Location: 4627433..4663876 Organism: Escherichia coli strain RIVM_C028803 Replicon: chromosome
Accession: NZ_CP068818 Location: 4627433..4663876 Organism: Escherichia coli strain RIVM_C028803 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN48_RS22615 () | 4622763..4623785 | - | 1023 | WP_001550507.1 | ABC transporter permease | - |
| JNN48_RS22620 () | 4623799..4625301 | - | 1503 | WP_001550506.1 | sugar ABC transporter ATP-binding protein | - |
| JNN48_RS22625 () | 4625433..4626389 | - | 957 | WP_000265933.1 | galactofuranose ABC transporter substrate-binding protein YtfQ | - |
| JNN48_RS22630 () | 4626699..4627229 | + | 531 | WP_000055075.1 | inorganic diphosphatase | - |
| JNN48_RS22635 () | 4627433..4627783 | - | 351 | WP_019842229.1 | endoribonuclease toxin ChpB | Toxin Detail |
| JNN48_RS22640 () | 4627777..4628028 | - | 252 | WP_001223213.1 | type II toxin-antitoxin system antitoxin ChpS | Antitoxin Detail |
| JNN48_RS22645 () | 4628319..4629314 | - | 996 | WP_001372721.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JNN48_RS22650 () | 4629381..4629680 | - | 300 | WP_062897648.1 | helix-turn-helix transcriptional regulator | - |
| JNN48_RS22655 () | 4629789..4630214 | + | 426 | WP_062897647.1 | hypothetical protein | - |
| JNN48_RS22660 () | 4630252..4630602 | + | 351 | WP_062897646.1 | DUF4761 family protein | - |
| JNN48_RS22665 () | 4630606..4630863 | + | 258 | WP_062897645.1 | hypothetical protein | - |
| JNN48_RS22670 () | 4630885..4631127 | + | 243 | WP_062897644.1 | DUF4754 family protein | - |
| JNN48_RS22675 () | 4631124..4631237 | + | 114 | WP_062897643.1 | hypothetical protein | - |
| JNN48_RS22680 () | 4631324..4631527 | + | 204 | WP_000985157.1 | hypothetical protein | - |
| JNN48_RS22685 () | 4631524..4631763 | + | 240 | WP_158124564.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| JNN48_RS22690 () | 4631760..4632059 | + | 300 | WP_202847203.1 | hypothetical protein | - |
| JNN48_RS22695 () | 4632074..4632625 | + | 552 | WP_202847204.1 | DNA-binding protein | - |
| JNN48_RS22700 () | 4632635..4633252 | + | 618 | WP_077879701.1 | ash family protein | - |
| JNN48_RS22705 () | 4633249..4633638 | + | 390 | WP_202847205.1 | inositol monophosphatase | - |
| JNN48_RS22710 () | 4633635..4636475 | + | 2841 | WP_202847206.1 | replication endonuclease | - |
| JNN48_RS22715 () | 4636552..4637511 | + | 960 | WP_202847207.1 | plasmid segregation protein ParM | - |
| JNN48_RS22720 () | 4637516..4637827 | + | 312 | WP_202847208.1 | plasmid partitioning/stability family protein | - |
| JNN48_RS22725 () | 4637877..4638071 | - | 195 | WP_136746568.1 | hypothetical protein | - |
| JNN48_RS22730 () | 4638114..4638445 | + | 332 | Protein_4447 | carboxylate--amine ligase | - |
| JNN48_RS22735 () | 4638511..4639035 | + | 525 | WP_202847209.1 | hypothetical protein | - |
| JNN48_RS22740 () | 4639032..4639571 | + | 540 | WP_202847210.1 | ead/Ea22-like family protein | - |
| JNN48_RS22745 () | 4640011..4641060 | - | 1050 | WP_202847211.1 | phage portal protein | - |
| JNN48_RS22750 () | 4641060..4642802 | - | 1743 | WP_202847212.1 | terminase family protein | - |
| JNN48_RS22755 () | 4642954..4643823 | + | 870 | WP_202847213.1 | GPO family capsid scaffolding protein | - |
| JNN48_RS22760 () | 4643833..4644894 | + | 1062 | WP_112047308.1 | phage major capsid protein, P2 family | - |
| JNN48_RS22765 () | 4644944..4645756 | + | 813 | WP_096989900.1 | terminase | - |
| JNN48_RS22770 () | 4645879..4646373 | + | 495 | WP_016240831.1 | head completion/stabilization protein | - |
| JNN48_RS22775 () | 4646373..4646573 | + | 201 | WP_016240832.1 | tail protein X | - |
| JNN48_RS22780 () | 4646564..4646857 | + | 294 | WP_021524210.1 | hypothetical protein | - |
| JNN48_RS22785 () | 4646844..4647386 | + | 543 | WP_096989899.1 | lysozyme | - |
| JNN48_RS22790 () | 4647383..4647829 | + | 447 | WP_202847214.1 | hypothetical protein | - |
| JNN48_RS22795 () | 4647924..4648406 | + | 483 | WP_032353987.1 | phage tail protein | - |
| JNN48_RS22800 () | 4648387..4649025 | + | 639 | WP_106482646.1 | phage virion morphogenesis protein | - |
| JNN48_RS22805 () | 4649022..4649603 | + | 582 | WP_032353246.1 | phage baseplate assembly protein V | - |
| JNN48_RS22810 () | 4649600..4649965 | + | 366 | WP_202847215.1 | GPW/gp25 family protein | - |
| JNN48_RS22815 () | 4649952..4650848 | + | 897 | WP_202847216.1 | baseplate J/gp47 family protein | - |
| JNN48_RS22820 () | 4650841..4651374 | + | 534 | WP_202847217.1 | phage tail protein I | - |
| JNN48_RS22825 () | 4651381..4654512 | + | 3132 | WP_202847218.1 | phage tail protein | - |
| JNN48_RS22830 () | 4654527..4655090 | + | 564 | WP_202847219.1 | tail fiber assembly protein | - |
| JNN48_RS22835 () | 4655471..4655929 | - | 459 | WP_202847220.1 | phage tail protein | - |
| JNN48_RS22840 () | 4655943..4659005 | - | 3063 | WP_202847221.1 | phage tail tape measure protein | - |
| JNN48_RS22845 () | 4658992..4659150 | - | 159 | WP_032142793.1 | GpE family phage tail protein | - |
| JNN48_RS22850 () | 4659156..4659572 | - | 417 | WP_050594640.1 | hypothetical protein | - |
| JNN48_RS22855 () | 4659619..4660134 | - | 516 | WP_021524218.1 | phage major tail tube protein | - |
| JNN48_RS22860 () | 4660135..4661316 | - | 1182 | WP_086795054.1 | phage tail sheath family protein | - |
| JNN48_RS22865 () | 4661480..4662613 | + | 1134 | WP_202847222.1 | phage late control D family protein | - |
| JNN48_RS22870 () | 4662592..4662921 | + | 330 | WP_202847223.1 | ogr/Delta-like zinc finger family protein | - |
| JNN48_RS22875 () | 4663138..4663278 | + | 141 | WP_000078916.1 | Hok/Gef family protein | - |
| JNN48_RS22880 () | 4663408..4663641 | - | 234 | WP_202847224.1 | membrane protein insertion efficiency factor YidD | - |
| JNN48_RS22885 () | 4663634..4663876 | - | 243 | WP_000288982.1 | hypothetical protein | - |
| JNN48_RS22890 () | 4664052..4664393 | - | 342 | WP_001550504.1 | gamma-glutamylcyclotransferase | - |
| JNN48_RS22895 () | 4664396..4668175 | - | 3780 | WP_001550503.1 | autotransporter assembly complex protein TamB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|