MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP068818 Location: 4047231..4057989 Organism: Escherichia coli strain RIVM_C028803 Replicon: chromosome
Accession: NZ_CP068818 Location: 4047231..4057989 Organism: Escherichia coli strain RIVM_C028803 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN48_RS19720 () | 4042577..4043359 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JNN48_RS19725 () | 4043675..4046884 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| JNN48_RS19730 () | 4047045..4047185 | + | 141 | WP_001308408.1 | ash family protein | - |
| JNN48_RS19735 () | 4047231..4047701 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| JNN48_RS19740 () | 4047698..4047800 | + | 103 | Protein_3861 | helix-turn-helix domain-containing protein | - |
| JNN48_RS19745 () | 4047892..4048050 | + | 159 | Protein_3862 | integrase | - |
| JNN48_RS19755 () | 4048255..4049508 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JNN48_RS19760 () | 4049520..4050623 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JNN48_RS19765 () | 4050911..4051966 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JNN48_RS19770 () | 4052005..4052406 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JNN48_RS19775 () | 4052464..4053708 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4053124..4053204 | - | 81 | NuclAT_11 | - | - |
| - () | 4053124..4053204 | - | 81 | NuclAT_11 | - | - |
| - () | 4053124..4053204 | - | 81 | NuclAT_11 | - | - |
| - () | 4053124..4053204 | - | 81 | NuclAT_11 | - | - |
| JNN48_RS19780 () | 4053800..4054258 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JNN48_RS19785 () | 4054519..4055976 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JNN48_RS19790 () | 4056033..4056385 | - | 353 | Protein_3870 | peptide chain release factor H | - |
| JNN48_RS19795 () | 4056381..4056587 | - | 207 | Protein_3871 | RtcB family protein | - |
| JNN48_RS19800 () | 4056833..4057285 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| JNN48_RS19805 () | 4057295..4057693 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN48_RS19810 () | 4057696..4057989 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN48_RS19815 () | 4058041..4059096 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| JNN48_RS19820 () | 4059167..4059952 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| JNN48_RS19825 () | 4059924..4061636 | + | 1713 | Protein_3877 | flagellar biosynthesis protein FlhA | - |
| JNN48_RS19830 () | 4061741..4062019 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JNN48_RS19835 () | 4062012..4062368 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|