MGE detailed information
MGE type: Prophage MGE length: 25285 bp
Accession: NZ_CP068818 Location: 2213193..2238477 Organism: Escherichia coli strain RIVM_C028803 Replicon: chromosome
Accession: NZ_CP068818 Location: 2213193..2238477 Organism: Escherichia coli strain RIVM_C028803 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN48_RS10715 () | 2209337..2211148 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| JNN48_RS10720 () | 2211185..2211826 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN48_RS10725 () | 2211881..2213059 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN48_RS10730 () | 2213193..2213483 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN48_RS10735 () | 2213550..2213906 | + | 357 | WP_001295500.1 | protein YebF | - |
| JNN48_RS10740 () | 2214233..2214892 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| JNN48_RS10745 () | 2215056..2216225 | - | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN48_RS10750 () | 2216282..2216707 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN48_RS10755 () | 2216864..2218924 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| JNN48_RS10760 () | 2218921..2219583 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN48_RS10765 () | 2219607..2220263 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JNN48_RS10770 () | 2220365..2220595 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN48_RS10775 () | 2220734..2221108 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JNN48_RS10780 () | 2221112..2221984 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| JNN48_RS10785 () | 2221997..2222338 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2222366..2222637 | - | 272 | - | - | Antitoxin Detail |
| - () | 2222496..2222599 | + | 104 | - | - | Toxin Detail |
| JNN48_RS10790 () | 2222734..2223390 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| JNN48_RS10795 () | 2223391..2223582 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JNN48_RS10800 () | 2223687..2223923 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN48_RS10805 () | 2224041..2225480 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN48_RS10810 () | 2225560..2228193 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JNN48_RS10815 () | 2228162..2229445 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| JNN48_RS10820 () | 2229575..2230072 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| JNN48_RS10825 () | 2230169..2230867 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN48_RS10830 () | 2230887..2232935 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN48_RS10835 () | 2233127..2234008 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JNN48_RS10840 () | 2234054..2235427 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| JNN48_RS10845 () | 2235604..2236395 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN48_RS10850 () | 2236539..2236778 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JNN48_RS10855 () | 2236937..2237080 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN48_RS10860 () | 2237155..2237442 | + | 288 | WP_001006855.1 | YebO family protein | - |
| JNN48_RS10865 () | 2238112..2238255 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JNN48_RS10870 () | 2238268..2238477 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN48_RS10875 () | 2238643..2239452 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN48_RS10880 () | 2239449..2240015 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN48_RS10885 () | 2240444..2240902 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JNN48_RS10890 () | 2240957..2241808 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN48_RS10895 () | 2241821..2242621 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|