MGE detailed information
MGE type: Genomic_island MGE length: 18737 bp
Accession: NZ_CP068817 Location: 4380955..4399691 Organism: Escherichia coli strain RIVM_C028786 Replicon: chromosome
Accession: NZ_CP068817 Location: 4380955..4399691 Organism: Escherichia coli strain RIVM_C028786 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN59_RS21065 () | 4376375..4377397 | - | 1023 | WP_000106005.1 | zinc-binding alcohol dehydrogenase family protein | - |
| JNN59_RS21070 () | 4377536..4378441 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| JNN59_RS21075 () | 4378612..4380264 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| JNN59_RS21080 () | 4380955..4381926 | + | 972 | WP_000034589.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| JNN59_RS21085 () | 4381990..4382463 | + | 474 | WP_001235678.1 | TRAP transporter small permease | - |
| JNN59_RS21090 () | 4382460..4383731 | + | 1272 | WP_000118642.1 | TRAP transporter large permease | - |
| JNN59_RS21095 () | 4383774..4385438 | - | 1665 | WP_000919563.1 | Methyl-accepting chemotaxis protein I | VF |
| JNN59_RS21100 () | 4385815..4387965 | + | 2151 | WP_001298085.1 | pyruvate/proton symporter BtsT | - |
| JNN59_RS21105 () | 4388083..4388286 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| JNN59_RS21110 () | 4388297..4389253 | + | 957 | WP_001298065.1 | GTPase | - |
| JNN59_RS21115 () | 4389322..4390974 | - | 1653 | WP_001298048.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| JNN59_RS21120 () | 4391252..4393684 | + | 2433 | WP_000819015.1 | DEAD/DEAH box helicase family protein | - |
| JNN59_RS21125 () | 4393751..4395220 | + | 1470 | WP_001540814.1 | type I restriction-modification system subunit M | - |
| JNN59_RS21130 () | 4395220..4396926 | + | 1707 | WP_001100194.1 | restriction endonuclease subunit S | - |
| - () | 4397076..4397152 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4397076..4397152 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4397076..4397152 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4397076..4397152 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4397076..4397152 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4397076..4397152 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4397076..4397152 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4397076..4397152 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| JNN59_RS21135 () | 4397147..4397488 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| JNN59_RS21140 () | 4397535..4399628 | - | 2094 | WP_000648237.1 | DUF262 domain-containing protein | - |
| JNN59_RS21145 () | 4399726..4399806 | - | 81 | WP_020233658.1 | hypothetical protein | - |
| JNN59_RS21150 () | 4400034..4400954 | - | 921 | WP_000181195.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JNN59_RS21155 () | 4401139..4402419 | + | 1281 | WP_001298033.1 | DUF445 domain-containing protein | - |
| JNN59_RS21160 () | 4402535..4403686 | + | 1152 | WP_001298064.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| JNN59_RS21165 () | 4403696..4404463 | + | 768 | WP_001298028.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|