MGE detailed information
MGE type: Genomic_island MGE length: 18737 bp
Accession: NZ_CP068816 Location: 4325797..4344533 Organism: Escherichia coli strain RIVM_C028724 Replicon: chromosome
Accession: NZ_CP068816 Location: 4325797..4344533 Organism: Escherichia coli strain RIVM_C028724 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN36_RS20730 () | 4321217..4322239 | - | 1023 | WP_000106005.1 | zinc-binding alcohol dehydrogenase family protein | - |
| JNN36_RS20735 () | 4322378..4323283 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| JNN36_RS20740 () | 4323454..4325106 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| JNN36_RS20745 () | 4325797..4326768 | + | 972 | WP_000034589.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| JNN36_RS20750 () | 4326832..4327305 | + | 474 | WP_001235678.1 | TRAP transporter small permease | - |
| JNN36_RS20755 () | 4327302..4328573 | + | 1272 | WP_000118642.1 | TRAP transporter large permease | - |
| JNN36_RS20760 () | 4328616..4330280 | - | 1665 | WP_000919563.1 | hypothetical protein | VF |
| JNN36_RS20765 () | 4330657..4332807 | + | 2151 | WP_001298085.1 | pyruvate/proton symporter BtsT | - |
| JNN36_RS20770 () | 4332925..4333128 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| JNN36_RS20775 () | 4333139..4334095 | + | 957 | WP_001298065.1 | GTPase | - |
| JNN36_RS20780 () | 4334164..4335816 | - | 1653 | WP_001298048.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| JNN36_RS20785 () | 4336094..4338526 | + | 2433 | WP_000819015.1 | DEAD/DEAH box helicase family protein | - |
| JNN36_RS20790 () | 4338593..4340062 | + | 1470 | WP_001540814.1 | type I restriction-modification system subunit M | - |
| JNN36_RS20795 () | 4340062..4341768 | + | 1707 | WP_001100194.1 | restriction endonuclease subunit S | - |
| - () | 4341918..4341994 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4341918..4341994 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4341918..4341994 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4341918..4341994 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4341918..4341994 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4341918..4341994 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4341918..4341994 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4341918..4341994 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| JNN36_RS20800 () | 4341989..4342330 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| JNN36_RS20805 () | 4342377..4344470 | - | 2094 | WP_000648237.1 | DUF262 domain-containing protein | - |
| JNN36_RS20810 () | 4344568..4344648 | - | 81 | WP_020233658.1 | hypothetical protein | - |
| JNN36_RS20815 () | 4344876..4345796 | - | 921 | WP_000181195.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JNN36_RS20820 () | 4345981..4347261 | + | 1281 | WP_001298033.1 | DUF445 domain-containing protein | - |
| JNN36_RS20825 () | 4347377..4348528 | + | 1152 | WP_001298064.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| JNN36_RS20830 () | 4348538..4349305 | + | 768 | WP_001298028.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|