MGE detailed information
MGE type: Genomic_island MGE length: 20355 bp
Accession: NZ_CP068816 Location: 3948305..3968659 Organism: Escherichia coli strain RIVM_C028724 Replicon: chromosome
Accession: NZ_CP068816 Location: 3948305..3968659 Organism: Escherichia coli strain RIVM_C028724 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN36_RS18885 () | 3943670..3944128 | - | 459 | WP_001291991.1 | xanthine phosphoribosyltransferase | - |
| JNN36_RS18890 () | 3944389..3945846 | + | 1458 | WP_001292999.1 | cytosol nonspecific dipeptidase | - |
| JNN36_RS18895 () | 3945903..3946517 | - | 615 | WP_000602124.1 | peptide chain release factor H | - |
| JNN36_RS18900 () | 3946514..3947653 | - | 1140 | WP_000521561.1 | RNA ligase RtcB family protein | - |
| JNN36_RS18905 () | 3947843..3948295 | - | 453 | WP_001059895.1 | GNAT family N-acetyltransferase | - |
| JNN36_RS18910 () | 3948305..3948703 | - | 399 | WP_001263500.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN36_RS18915 () | 3948706..3948999 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN36_RS18920 () | 3949051..3950106 | - | 1056 | WP_001226168.1 | DNA polymerase IV | - |
| JNN36_RS18925 () | 3950177..3950962 | - | 786 | WP_000207578.1 | hypothetical protein | VF |
| JNN36_RS18930 () | 3950934..3952646 | + | 1713 | Protein_3714 | hypothetical protein | VF |
| JNN36_RS18935 () | 3952674..3952883 | + | 210 | WP_071778446.1 | hypothetical protein | - |
| JNN36_RS18940 () | 3952966..3953463 | - | 498 | WP_000006241.1 | REP-associated tyrosine transposase RayT | - |
| JNN36_RS18945 () | 3953639..3954388 | - | 750 | WP_000093934.1 | hypothetical protein | VF |
| JNN36_RS18950 () | 3954700..3955440 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| JNN36_RS18955 () | 3955411..3956178 | - | 768 | WP_001298195.1 | class II glutamine amidotransferase | - |
| JNN36_RS18960 () | 3956383..3956961 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| JNN36_RS18965 () | 3957201..3959645 | + | 2445 | WP_000973131.1 | hypothetical protein | VF |
| JNN36_RS18970 () | 3959688..3960134 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| JNN36_RS18975 () | 3960315..3961085 | + | 771 | WP_001118042.1 | 2-oxoglutaramate amidase | - |
| JNN36_RS18980 () | 3961136..3961330 | - | 195 | Protein_3724 | transposase | - |
| JNN36_RS18985 () | 3961356..3961844 | - | 489 | WP_001298174.1 | integrating conjugative element protein | - |
| JNN36_RS18990 () | 3961938..3962441 | - | 504 | WP_000227712.1 | hypothetical protein | - |
| JNN36_RS18995 () | 3962670..3963434 | - | 765 | Protein_3727 | ISAs1 family transposase | - |
| JNN36_RS19000 () | 3963692..3963982 | - | 291 | WP_000513317.1 | hypothetical protein | - |
| JNN36_RS19005 () | 3963957..3965396 | - | 1440 | WP_000528851.1 | DUF4150 domain-containing protein | - |
| JNN36_RS19010 () | 3965389..3966435 | - | 1047 | WP_000571853.1 | DUF2169 domain-containing protein | - |
| JNN36_RS19015 () | 3966542..3968524 | - | 1983 | Protein_3731 | hypothetical protein | VF |
| JNN36_RS19020 () | 3968745..3969263 | - | 519 | WP_001142963.1 | Hcp family type VI secretion system effector | - |
| JNN36_RS19025 () | 3969969..3970472 | + | 504 | WP_000041480.1 | type VI secretion system contractile sheath small subunit | - |
| JNN36_RS19030 () | 3970495..3971979 | + | 1485 | WP_000111582.1 | type VI secretion system contractile sheath large subunit | - |
| JNN36_RS19035 () | 3971984..3972409 | + | 426 | WP_001189667.1 | type VI secretion system baseplate subunit TssE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|