MGE detailed information
MGE type: Genomic_island MGE length: 23513 bp
Accession: NZ_CP068814 Location: 867137..890649 Organism: Escherichia coli strain RIVM_C028613 Replicon: chromosome
Accession: NZ_CP068814 Location: 867137..890649 Organism: Escherichia coli strain RIVM_C028613 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN56_RS04085 () | 862419..862790 | + | 372 | WP_000820092.1 | type II secretion system minor pseudopilin GspI | - |
| JNN56_RS04090 () | 862787..863392 | + | 606 | WP_001564075.1 | type II secretion system minor pseudopilin GspJ | - |
| JNN56_RS04095 () | 863389..864366 | + | 978 | WP_001564074.1 | type II secretion system minor pseudopilin GspK | - |
| JNN56_RS04100 () | 864363..865541 | + | 1179 | WP_000095005.1 | type II secretion system protein GspL | - |
| JNN56_RS04105 () | 865543..866079 | + | 537 | WP_202845948.1 | GspM family type II secretion system protein YghD | - |
| JNN56_RS04110 () | 867137..867913 | + | 777 | WP_001564072.1 | hypothetical protein | VF |
| JNN56_RS04115 () | 867910..868572 | + | 663 | WP_000590254.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JNN56_RS04120 () | 868615..872088 | + | 3474 | WP_001564071.1 | HAD-IA family hydrolase | - |
| JNN56_RS04125 () | 872108..873478 | + | 1371 | WP_089564247.1 | hypothetical protein | - |
| JNN56_RS04130 () | 873475..874191 | + | 717 | WP_000600935.1 | glycosyltransferase family 2 protein | - |
| JNN56_RS04135 () | 874194..874562 | + | 369 | WP_001564070.1 | capsule biosynthesis phosphatase | - |
| JNN56_RS04140 () | 874559..876136 | + | 1578 | WP_001564069.1 | nucleotidyltransferase family protein | - |
| JNN56_RS04145 () | 876805..877992 | - | 1188 | WP_001161839.1 | hypothetical protein | VF |
| JNN56_RS04150 () | 878027..880054 | - | 2028 | WP_021572937.1 | hypothetical protein | VF |
| JNN56_RS04155 () | 880051..880791 | - | 741 | WP_000030749.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| JNN56_RS04160 () | 880801..882477 | - | 1677 | WP_001323195.1 | hypothetical protein | VF |
| JNN56_RS04165 () | 882501..883649 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| JNN56_RS04170 () | 883721..884704 | - | 984 | WP_126778362.1 | Inosine-5'-monophosphate dehydrogenase | VF |
| JNN56_RS04175 () | 885515..885670 | - | 156 | WP_000729638.1 | hypothetical protein | - |
| JNN56_RS04180 () | 886102..887035 | - | 934 | Protein_822 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| JNN56_RS04185 () | 887028..887423 | - | 396 | WP_000208382.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JNN56_RS04190 () | 887492..888337 | - | 846 | WP_001530851.1 | DUF4942 domain-containing protein | - |
| JNN56_RS04195 () | 888422..888619 | - | 198 | WP_000839250.1 | DUF957 domain-containing protein | - |
| JNN56_RS04200 () | 888636..889124 | - | 489 | WP_000761698.1 | hypothetical protein | - |
| JNN56_RS04205 () | 889121..889498 | - | 378 | WP_000854689.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN56_RS04210 () | 889575..889955 | - | 381 | WP_001285599.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN56_RS04215 () | 890005..890649 | - | 645 | WP_000086757.1 | hypothetical protein | - |
| JNN56_RS04220 () | 890668..890889 | - | 222 | WP_000692315.1 | DUF987 domain-containing protein | - |
| JNN56_RS04225 () | 890954..891430 | - | 477 | WP_001186727.1 | RadC family protein | - |
| JNN56_RS04230 () | 891446..891919 | - | 474 | WP_001538139.1 | antirestriction protein | - |
| JNN56_RS04235 () | 892183..893004 | - | 822 | WP_173009496.1 | DUF945 domain-containing protein | - |
| JNN56_RS04240 () | 893105..893314 | - | 210 | Protein_834 | DUF905 family protein | - |
| JNN56_RS04245 () | 893415..893870 | - | 456 | WP_005051844.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|