MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP068814 Location: 4205736..4216494 Organism: Escherichia coli strain RIVM_C028613 Replicon: chromosome
Accession: NZ_CP068814 Location: 4205736..4216494 Organism: Escherichia coli strain RIVM_C028613 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN56_RS20265 () | 4201082..4201864 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JNN56_RS20270 () | 4202180..4205389 | + | 3210 | WP_060624753.1 | RNA-directed DNA polymerase | - |
| JNN56_RS20275 () | 4205550..4205690 | + | 141 | WP_001308408.1 | ash family protein | - |
| JNN56_RS20280 () | 4205736..4206206 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| JNN56_RS20285 () | 4206203..4206305 | + | 103 | Protein_3974 | helix-turn-helix domain-containing protein | - |
| JNN56_RS20290 () | 4206397..4206555 | + | 159 | Protein_3975 | integrase | - |
| JNN56_RS20300 () | 4206760..4208013 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JNN56_RS20305 () | 4208025..4209128 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JNN56_RS20310 () | 4209416..4210471 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JNN56_RS20315 () | 4210510..4210911 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JNN56_RS20320 () | 4210969..4212213 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4211629..4211709 | - | 81 | NuclAT_11 | - | - |
| - () | 4211629..4211709 | - | 81 | NuclAT_11 | - | - |
| - () | 4211629..4211709 | - | 81 | NuclAT_11 | - | - |
| - () | 4211629..4211709 | - | 81 | NuclAT_11 | - | - |
| JNN56_RS20325 () | 4212305..4212763 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JNN56_RS20330 () | 4213024..4214481 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JNN56_RS20335 () | 4214538..4214890 | - | 353 | Protein_3983 | peptide chain release factor H | - |
| JNN56_RS20340 () | 4214886..4215092 | - | 207 | Protein_3984 | RtcB family protein | - |
| JNN56_RS20345 () | 4215338..4215790 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| JNN56_RS20350 () | 4215800..4216198 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN56_RS20355 () | 4216201..4216494 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN56_RS20360 () | 4216546..4217601 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| JNN56_RS20365 () | 4217672..4218457 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| JNN56_RS20370 () | 4218429..4220141 | + | 1713 | Protein_3990 | flagellar biosynthesis protein FlhA | - |
| JNN56_RS20375 () | 4220246..4220524 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JNN56_RS20380 () | 4220517..4220873 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|