NZ_CP068813765876..960920

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 195045 bp
Accession: NZ_CP068813        Location: 765876..960920         Organism: Escherichia coli strain RIVM_C029033       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JNN62_RS03620 () 761058..761687 - 630 WP_001551667.1 DUF1449 family protein -
JNN62_RS03625 () 761957..762157 + 201 WP_001296424.1 cell surface composition regulator GlgS -
JNN62_RS03630 () 762192..762491 - 300 WP_001298379.1 ubiquinone biosynthesis accessory factor UbiK -
JNN62_RS03635 () 762865..763518 + 654 WP_001551665.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
JNN62_RS03640 () 763780..763950 + 171 WP_000469266.1 hypothetical protein -
JNN62_RS03645 () 764008..764781 - 774 WP_001295627.1 zinc transporter ZupT -
JNN62_RS03650 () 764924..765712 + 789 WP_001445835.1 4,5-DOPA dioxygenase extradiol -
JNN62_RS03655 () 765758..766429 - 672 WP_000511501.1 protein-disulfide oxidoreductase DsbI -
JNN62_RS03660 () 766444..767112 - 669 WP_000040021.1 thiol:disulfide interchange protein DsbA/DsbL -
JNN62_RS03665 () 767130..768926 - 1797 WP_001551664.1 aryl-sulfate sulfotransferase -
JNN62_RS03670 () 769411..770571 - 1161 WP_000442860.1 glutathionylspermidine synthase family protein -
JNN62_RS03675 () 770577..771248 - 672 WP_000831543.1 DUF1190 family protein -
JNN62_RS03680 () 771396..772877 - 1482 WP_000735278.1 outer membrane channel protein TolC -
JNN62_RS03685 () 773082..773711 + 630 WP_000917117.1 ADP-ribose diphosphatase -
JNN62_RS03690 () 773712..774134 + 423 WP_000833393.1 DUF1249 family protein -
JNN62_RS03695 () 774159..774986 + 828 WP_000444747.1 3',5'-cyclic-AMP phosphodiesterase -
JNN62_RS03700 () 774986..775567 + 582 WP_001551663.1 esterase YqiA -
JNN62_RS03705 () 775596..777488 + 1893 WP_000195296.1 DNA topoisomerase IV subunit B -
JNN62_RS03710 () 777552..779693 - 2142 WP_059332355.1 TonB-dependent siderophore receptor -
JNN62_RS03715 () 780067..780876 + 810 WP_000940876.1 Vitamin B12 import ATP-binding protein BtuD VF
JNN62_RS03720 () 780873..781856 + 984 WP_001551660.1 Vitamin B12 import system permease protein BtuC VF
JNN62_RS03725 () 781865..782902 + 1038 WP_001490512.1 Vitamin B12 import system permease protein BtuC VF
JNN62_RS03730 () 782913..783860 + 948 WP_001305988.1 iron-siderophore ABC transporter substrate-binding protein -
JNN62_RS03735 () 783857..784744 + 888 WP_000614953.1 MurR/RpiR family transcriptional regulator -
JNN62_RS03740 () 784789..785103 - 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
JNN62_RS03745 () 785134..785715 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
JNN62_RS03750 () 786073..786402 + 330 WP_001551659.1 DUF2645 family protein -
JNN62_RS03755 () 786451..787800 - 1350 WP_001551658.1 two-component system sensor histidine kinase QseC -
JNN62_RS03760 () 787797..788456 - 660 WP_001221493.1 Regulator of RpoS VF
JNN62_RS03765 () 788608..789000 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
JNN62_RS03770 () 789053..789535 + 483 WP_000183492.1 GyrI-like domain-containing protein -
JNN62_RS03775 () 789644..791251 + 1608 WP_001551657.1 ABC transporter substrate-binding protein -
JNN62_RS03780 () 791389..793647 + 2259 WP_001551656.1 DNA topoisomerase IV subunit A -
JNN62_RS03785 () 793881..794618 + 738 WP_000965711.1 1-acylglycerol-3-phosphate O-acyltransferase -
JNN62_RS03790 () 794693..796105 + 1413 WP_000059395.1 cell division protein FtsP -
JNN62_RS03795 () 796216..798435 + 2220 WP_001551655.1 YgiQ family radical SAM protein -
JNN62_RS03800 () 798477..798734 - 258 WP_000848523.1 lipoprotein YqhH -
JNN62_RS03805 () 798785..799711 - 927 WP_001551654.1 YbjP/YqhG family protein -
JNN62_RS03810 () 799911..800738 - 828 WP_000013149.1 2,5-didehydrogluconate reductase DkgA -
JNN62_RS03815 () 800843..802006 - 1164 WP_059332340.1 alcohol dehydrogenase -
JNN62_RS03820 () 802200..803099 + 900 WP_001329635.1 DNA-binding transcriptional regulator YqhC -
JNN62_RS03825 () 803139..803798 - 660 WP_000268426.1 DedA family protein -
JNN62_RS03830 () 803938..805125 - 1188 WP_001551653.1 cystathionine beta-lyase -
JNN62_RS03835 () 805377..806111 + 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
JNN62_RS03840 () 806118..806543 + 426 WP_001240712.1 TonB system transport protein ExbD -
JNN62_RS03845 () 806582..807466 - 885 WP_000018777.1 NADP(+)-dependent aldehyde reductase -
JNN62_RS03850 () 807657..808151 + 495 WP_000439331.1 TIGR00645 family protein -
JNN62_RS03855 () 808191..809231 - 1041 WP_000262171.1 L-glyceraldehyde 3-phosphate reductase -
JNN62_RS03860 () 809388..810275 + 888 WP_001551652.1 dienelactone hydrolase family protein -
JNN62_RS03865 () 810394..810681 + 288 WP_001059139.1 DUF2623 domain-containing protein -
JNN62_RS03870 () 810870..811988 + 1119 WP_000145410.1 hydrogenase 2 small subunit -
JNN62_RS03875 () 811991..812977 + 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
JNN62_RS03880 () 812967..814145 + 1179 WP_000017694.1 Ni/Fe-hydrogenase cytochrome b subunit -
JNN62_RS03885 () 814142..815845 + 1704 WP_000083065.1 hydrogenase 2 large subunit -
JNN62_RS03890 () 815845..816339 + 495 WP_001221954.1 HyaD/HybD family hydrogenase maturation endopeptidase -
JNN62_RS03895 () 816332..816820 + 489 WP_000134014.1 hydrogenase-2 assembly chaperone -
JNN62_RS03900 () 816813..817154 + 342 WP_001551651.1 hydrogenase maturation nickel metallochaperone HypA -
JNN62_RS03905 () 817167..817415 + 249 WP_000334896.1 hydrogenase maturation factor HybG -
JNN62_RS03910 () 817485..818351 - 867 WP_001400742.1 glutathione-dependent disulfide-bond oxidoreductase -
JNN62_RS03915 () 818556..820415 + 1860 WP_001295514.1 bifunctional glutathionylspermidine amidase/synthase -
JNN62_RS03920 () 820707..822206 + 1500 WP_000933277.1 inorganic phosphate transporter PitB -
JNN62_RS03925 () 822255..822947 - 693 WP_001190784.1 thymidylate kinase -
JNN62_RS03930 () 823121..823834 + 714 WP_001076239.1 thymidylate kinase -
JNN62_RS03935 () 823866..824624 + 759 WP_001551649.1 hypothetical protein -
JNN62_RS03940 () 824670..826019 + 1350 WP_000896889.1 lipopolysaccharide biosynthesis protein -
JNN62_RS03945 () 826019..826855 + 837 WP_001551647.1 hypothetical protein -
JNN62_RS03950 () 826855..827415 + 561 WP_001551646.1 YtfJ family protein -
JNN62_RS03955 () 827446..828516 + 1071 WP_000779651.1 LPS export ABC transporter permease LptF -
JNN62_RS03960 () 828513..829592 + 1080 WP_001315007.1 LPS export ABC transporter permease LptG -
JNN62_RS03965 () 829627..830799 - 1173 WP_000524940.1 8-amino-7-oxononanoate synthase VF
JNN62_RS03970 () 830799..831047 - 249 WP_000248097.1 acyl carrier protein -
JNN62_RS03975 () 831079..831993 - 915 WP_001551645.1 NAD-dependent epimerase/dehydratase family protein -
JNN62_RS03980 () 831990..833711 - 1722 WP_155104772.1 2-succinylbenzoate--CoA ligase VF
JNN62_RS03985 () 834082..835224 + 1143 WP_001551643.1 hypothetical protein -
JNN62_RS03990 () 835231..835995 - 765 WP_001308944.1 transcriptional regulator GlcC -
JNN62_RS03995 () 836246..837745 + 1500 WP_000026123.1 glycolate oxidase subunit GlcD -
JNN62_RS04000 () 837745..838797 + 1053 WP_000943083.1 glycolate oxidase subunit GlcE -
JNN62_RS04005 () 838808..840031 + 1224 WP_001194653.1 glycolate oxidase subunit GlcF -
JNN62_RS04010 () 840036..840440 + 405 WP_000853256.1 protein GlcG -
JNN62_RS04015 () 840462..842633 + 2172 WP_001551642.1 malate synthase G -
JNN62_RS04020 () 842988..844670 + 1683 WP_000259302.1 glycolate permease GlcA -
JNN62_RS04025 () 845153..849718 + 4566 WP_016247683.1 hypothetical protein VF
JNN62_RS04030 () 849848..850657 + 810 WP_001305093.1 hypothetical protein VF
JNN62_RS04035 () 850723..851133 + 411 WP_001298257.1 type II secretion system pilot lipoprotein GspS-beta -
JNN62_RS04040 () 851151..852110 + 960 WP_024189718.1 hypothetical protein VF
JNN62_RS04045 () 852140..854200 + 2061 WP_001468189.1 hypothetical protein VF
JNN62_RS04050 () 854200..855693 + 1494 WP_000249375.1 hypothetical protein VF
JNN62_RS04055 () 855693..856916 + 1224 WP_001173425.1 hypothetical protein VF
JNN62_RS04060 () 856933..857388 + 456 WP_001087296.1 hypothetical protein VF
JNN62_RS04065 () 857392..857955 + 564 WP_001115117.1 hypothetical protein VF
JNN62_RS04070 () 857952..858323 + 372 WP_000820092.1 hypothetical protein VF
JNN62_RS04075 () 858320..858925 + 606 WP_001254776.1 hypothetical protein VF
JNN62_RS04080 () 858922..859899 + 978 WP_000633242.1 hypothetical protein VF
JNN62_RS04085 () 859896..861074 + 1179 WP_000095005.1 hypothetical protein VF
JNN62_RS04090 () 861076..861612 + 537 WP_000942771.1 hypothetical protein VF
JNN62_RS04095 () 862670..863446 + 777 WP_000124291.1 hypothetical protein VF
JNN62_RS04100 () 863443..864117 + 675 WP_000590243.1 Vitamin B12 import ATP-binding protein BtuD VF
JNN62_RS04105 () 864495..864651 + 157 Protein_805 transposase -
JNN62_RS04110 () 865102..865818 + 717 WP_000634338.1 hypothetical protein -
JNN62_RS04115 () 866253..867942 + 1690 Protein_807 hypothetical protein VF
JNN62_RS04120 () 868039..869073 - 1035 Protein_808 IS481 family transposase -
JNN62_RS04125 () 869234..870796 + 1563 WP_001305085.1 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase VF
JNN62_RS04130 () 870838..872016 + 1179 WP_001305084.1 UDP-N-acetyl-D-mannosamine dehydrogenase VF
JNN62_RS04135 () 872355..873524 - 1170 WP_001161856.1 hypothetical protein VF
JNN62_RS04140 () 873559..875586 - 2028 WP_000579513.1 hypothetical protein VF
JNN62_RS04145 () 875583..876323 - 741 WP_000030749.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
JNN62_RS04150 () 876333..878009 - 1677 WP_001564067.1 hypothetical protein VF
JNN62_RS04155 () 878033..879181 - 1149 WP_000905920.1 hypothetical protein VF
JNN62_RS04160 () 879253..880236 - 984 WP_001296394.1 Inosine-5'-monophosphate dehydrogenase VF
JNN62_RS04165 () 881046..881216 - 171 Protein_817 IS110 family transposase ISEc32 Transposase
JNN62_RS04170 () 881559..882401 - 843 Protein_818 DUF4942 domain-containing protein -
JNN62_RS04175 () 882486..882680 - 195 WP_024181941.1 DUF957 domain-containing protein -
JNN62_RS04180 () 882759..882908 - 150 Protein_820 hypothetical protein -
JNN62_RS04185 () 882905..883282 - 378 WP_001564063.1 TA system toxin CbtA family protein Toxin Detail
JNN62_RS04190 () 883372..883740 - 369 WP_021553056.1 type IV toxin-antitoxin system YeeU family antitoxin Antitoxin Detail
JNN62_RS04195 () 883903..884124 - 222 WP_000692345.1 DUF987 domain-containing protein -
JNN62_RS04200 () 884189..884665 - 477 WP_021553055.1 RadC family protein -
JNN62_RS04205 () 884681..885160 - 480 WP_001564060.1 antirestriction protein -
JNN62_RS04210 () 885426..886244 - 819 WP_001564059.1 DUF945 domain-containing protein -
JNN62_RS04215 () 886334..886567 - 234 WP_001278293.1 DUF905 family protein -
JNN62_RS04220 () 886573..887250 - 678 WP_001564058.1 hypothetical protein -
JNN62_RS04225 () 887401..888081 - 681 WP_001278649.1 WYL domain-containing protein -
JNN62_RS04230 () 888284..889168 - 885 WP_001564055.1 50S ribosome-binding GTPase -
JNN62_RS04235 () 889269..890492 + 1224 WP_085334590.1 hypothetical protein -
JNN62_RS04240 () 891655..892185 - 531 WP_000778605.1 hypothetical protein -
JNN62_RS04245 () 892855..893586 + 732 WP_001075495.1 inovirus Gp2 family protein -
JNN62_RS04250 () 894107..894559 + 453 WP_000558152.1 N-acetyltransferase -
JNN62_RS04255 () 895095..896030 + 936 WP_000332862.1 pseudouridine kinase -
JNN62_RS04260 () 896023..896958 + 936 WP_001290195.1 pseudouridine-5'-phosphate glycosidase -
JNN62_RS04265 () 897042..898292 + 1251 WP_001328687.1 NupC/NupG family nucleoside CNT transporter -
JNN62_RS04270 () 898311..899405 - 1095 WP_000370278.1 sugar kinase -
JNN62_RS04275 () 900706..901272 + 567 WP_001126810.1 inovirus-type Gp2 protein -
JNN62_RS04280 () 901530..902105 + 576 WP_001564054.1 hypothetical protein -
JNN62_RS04285 () 902174..902407 + 234 WP_000958492.1 AlpA family transcriptional regulator -
JNN62_RS04290 () 902419..902644 + 226 Protein_842 hypothetical protein -
JNN62_RS04295 () 902706..902972 - 267 Protein_843 IS3 family transposase IS2 Transposase
JNN62_RS04300 () 903063..904220 + 1158 Protein_844 Multidrug resistance protein MdtB VF
JNN62_RS04305 () 904341..904991 + 651 WP_001564048.1 TetR/AcrR family transcriptional regulator -
JNN62_RS04310 () 905014..905307 + 294 Protein_846 helix-turn-helix domain-containing protein -
JNN62_RS04315 () 905664..906209 - 546 WP_001564047.1 propanediol utilization system shell hexameric protein GrpS -
JNN62_RS04320 () 906254..907405 - 1152 WP_001001003.1 propanediol utilization system methionine adenosyltransferase GrpR -
JNN62_RS04325 () 907534..908589 - 1056 WP_001564046.1 HTH-type transcriptional activator RhaR VF
JNN62_RS04330 () 908606..909835 - 1230 WP_000792585.1 propanediol utilization sensor histidine kinase GrpP -
JNN62_RS04335 () 910484..911077 - 594 Protein_851 maturase -
JNN62_RS04340 () 911077..911446 - 370 Protein_852 reverse transcriptase/maturase -
JNN62_RS04345 () 912058..912963 - 906 WP_001564044.1 propanediol utilization system permease GrpO -
JNN62_RS04350 () 913100..914017 - 918 WP_001564043.1 glycyl radical diol dehydratase-activating enzyme GrpN -
JNN62_RS04355 () 914126..916678 - 2553 WP_000890295.1 glycyl radical diol dehydratase GrpM -
JNN62_RS04360 () 916727..917302 - 576 WP_000722279.1 propanediol utilization system protease GrpL -
JNN62_RS04365 () 917313..917612 - 300 WP_000746009.1 propanediol utilization system shell hexameric protein GrpK -
JNN62_RS04370 () 917636..919153 - 1518 WP_000997839.1 N-succinylglutamate 5-semialdehyde dehydrogenase VF
JNN62_RS04375 () 919214..919999 - 786 WP_001205499.1 propanediol utilization microcompartment protein GrpI -
JNN62_RS04380 () 920021..920302 - 282 WP_001301171.1 propanediol utilization system shell hexameric protein GrpH -
JNN62_RS04385 () 920587..921783 - 1197 WP_001362987.1 propanediol utilization system propionate kinase GrpG -
JNN62_RS04390 () 921812..922309 - 498 WP_001564042.1 propanediol utilization system heme-binding protein GrpF -
JNN62_RS04395 () 922337..922606 - 270 WP_001564041.1 propanediol utilization microcompartment vertex protein GrpE -
JNN62_RS04400 () 922618..923322 - 705 WP_000370214.1 propanediol utilization system flavoprotein GrpD -
JNN62_RS04405 () 923327..924085 - 759 WP_001332070.1 propanediol utilization system chaperone GrpC -
JNN62_RS04410 () 924140..924826 - 687 WP_001109982.1 propanediol utilization system phosphotransacylase GrpB -
JNN62_RS04415 () 924966..926084 - 1119 WP_000135343.1 hypothetical protein VF
JNN62_RS04420 () 926441..926941 + 501 Protein_868 DNA-binding protein -
JNN62_RS04425 () 927037..927270 + 234 WP_000124185.1 hypothetical protein -
JNN62_RS04430 () 927323..927514 - 192 WP_001287883.1 DUF4222 domain-containing protein -
JNN62_RS04435 () 928235..928495 + 261 Protein_871 IS3 family transposase ISLad1 Transposase
JNN62_RS04440 () 928638..930383 + 1746 WP_001564039.1 AAA family ATPase -
JNN62_RS04445 () 930777..931217 + 441 WP_001403216.1 hypothetical protein VF
JNN62_RS04450 () 931258..932124 + 867 Protein_874 ImpA domain protein -
JNN62_RS04455 () 932241..932885 + 645 WP_024196335.1 hypothetical protein -
JNN62_RS04460 () 933026..934258 + 1233 WP_001564037.1 phosphoadenosine phosphosulfate reductase -
JNN62_RS04465 () 934243..934881 + 639 WP_001564035.1 ParB N-terminal domain-containing protein -
JNN62_RS04470 () 934960..935229 + 270 WP_000226517.1 PerC family transcriptional regulator -
JNN62_RS04475 () 935250..935894 + 645 WP_001564034.1 hypothetical protein -
JNN62_RS04480 () 935959..936282 + 324 WP_001564033.1 hypothetical protein -
JNN62_RS04485 () 936330..937121 - 792 Protein_881 ATP-dependent helicase -
JNN62_RS04490 () 937116..937505 + 390 Protein_882 IS3 family transposase -
JNN62_RS04495 () 938178..939686 + 1509 WP_001189111.1 group II intron reverse transcriptase/maturase -
JNN62_RS04500 () 939776..940249 + 474 Protein_884 IS3 family transposase IS629 Transposase
JNN62_RS04505 () 940447..940704 - 258 Protein_885 IS3 family transposase IS911 Transposase
JNN62_RS04510 () 940774..941121 - 348 WP_001564031.1 alcohol dehydrogenase catalytic domain-containing protein -
JNN62_RS04515 () 941740..942433 - 694 Protein_887 IS1 family transposase IS1N Transposase
JNN62_RS04520 () 942686..944155 + 1470 WP_001331566.1 basic amino acid/polyamine antiporter -
JNN62_RS04525 () 944260..946629 + 2370 WP_000671170.1 arginine decarboxylase -
JNN62_RS04530 () 946704..948203 + 1500 WP_001331567.1 basic amino acid/polyamine antiporter -
JNN62_RS04535 () 948346..949043 + 698 Protein_891 IS1 family transposase IS1S Transposase
JNN62_RS04540 () 949510..950061 - 552 WP_001447126.1 Transcriptional regulator SlyA VF
JNN62_RS04545 () 950228..951019 - 792 Protein_893 IS3 family transposase -
JNN62_RS04550 () 951036..951733 - 698 Protein_894 IS1 family transposase IS1A Transposase
JNN62_RS04555 () 952263..953306 - 1044 WP_000147018.1 hypothetical protein -
JNN62_RS04560 () 953562..954827 - 1266 WP_001218869.1 hypothetical protein ; Integrase Integrase
JNN62_RS04565 () 955291..955617 - 327 WP_001522265.1 type II toxin-antitoxin system RelE/ParE family toxin -
JNN62_RS04570 () 955614..955877 - 264 WP_001143297.1 type II toxin-antitoxin system ParD family antitoxin -
JNN62_RS04575 () 955949..956815 - 867 WP_023909479.1 DUF4942 domain-containing protein -
JNN62_RS04580 () 956900..957097 - 198 WP_001522268.1 DUF957 domain-containing protein -
JNN62_RS04585 () 957109..957600 - 492 WP_023909481.1 hypothetical protein -
JNN62_RS04590 () 957597..957971 - 375 WP_023909482.1 TA system toxin CbtA family protein Toxin Detail
JNN62_RS04595 () 958018..958392 - 375 WP_023909483.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
JNN62_RS04600 () 958472..958693 - 222 WP_023909484.1 DUF987 domain-containing protein -
JNN62_RS04605 () 958745..959500 - 756 WP_001522280.1 IS21 family transposase ISEc10 Transposase
JNN62_RS04610 () 959497..960996 - 1500 WP_059332257.1 IS21-like element ISEc10 family transposase -
JNN62_RS04615 () 961177..961653 - 477 WP_001186724.1 RadC family protein -
JNN62_RS04620 () 961668..962141 - 474 WP_001522284.1 antirestriction protein -
JNN62_RS04625 () 962236..962412 - 177 WP_001522285.1 hypothetical protein -
JNN62_RS04630 () 962412..963230 - 819 WP_001522287.1 DUF945 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance