MGE detailed information
MGE type: Genomic_island MGE length: 11806 bp
Accession: NZ_CP068812 Location: 3678297..3690102 Organism: Escherichia coli strain RIVM_C029020 Replicon: chromosome
Accession: NZ_CP068812 Location: 3678297..3690102 Organism: Escherichia coli strain RIVM_C029020 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN61_RS17470 () | 3673992..3675305 | - | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| JNN61_RS17475 () | 3675317..3675595 | - | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JNN61_RS17480 () | 3675592..3676713 | - | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JNN61_RS17485 () | 3676958..3677074 | - | 117 | Protein_3411 | VOC family protein | - |
| JNN61_RS17490 () | 3677112..3677372 | - | 261 | WP_000084876.1 | hypothetical protein | - |
| JNN61_RS17495 () | 3677499..3678047 | - | 549 | WP_001519301.1 | hypothetical protein | - |
| JNN61_RS17500 () | 3678084..3678245 | - | 162 | WP_001519302.1 | hypothetical protein | - |
| JNN61_RS17505 () | 3678297..3678848 | - | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| JNN61_RS17510 () | 3678860..3679117 | - | 258 | WP_001550554.1 | hypothetical protein | Toxin Detail |
| JNN61_RS17515 () | 3679494..3679793 | - | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| JNN61_RS17520 () | 3679856..3681097 | + | 1242 | Protein_3418 | helicase YjhR | - |
| JNN61_RS17525 () | 3681680..3682660 | - | 981 | WP_001519307.1 | transposase | - |
| JNN61_RS17530 () | 3682725..3683831 | - | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| JNN61_RS17535 () | 3683851..3684567 | - | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN61_RS17540 () | 3686031..3686633 | + | 603 | WP_001564306.1 | Tyrosine recombinase XerC | VF |
| JNN61_RS17545 () | 3687111..3687707 | + | 597 | WP_000044708.1 | Tyrosine recombinase XerD | VF |
| JNN61_RS17550 () | 3688188..3688736 | + | 549 | WP_001357506.1 | Type-1 fimbrial protein, A chain | VF |
| JNN61_RS17555 () | 3688801..3689340 | + | 540 | WP_000824099.1 | putative major fimbrial subunit LpfA | VF |
| JNN61_RS17560 () | 3689377..3690102 | + | 726 | WP_000066559.1 | Chaperone protein FimC | VF |
| JNN61_RS17565 () | 3690168..3692804 | + | 2637 | WP_000120954.1 | fimbrial usher FimD | - |
| JNN61_RS17570 () | 3692814..3693344 | + | 531 | WP_001244821.1 | type 1 fimbria minor subunit FimF | - |
| JNN61_RS17575 () | 3693357..3693860 | + | 504 | WP_000870577.1 | type 1 fimbria minor subunit FimG | - |
| JNN61_RS17580 () | 3693880..3694782 | + | 903 | WP_000832236.1 | type 1 fimbria D-mannose specific adhesin FimH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|