MGE detailed information
MGE type: Prophage MGE length: 25285 bp
Accession: NZ_CP068811 Location: 2192490..2217774 Organism: Escherichia coli strain RIVM_C028568 Replicon: chromosome
Accession: NZ_CP068811 Location: 2192490..2217774 Organism: Escherichia coli strain RIVM_C028568 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN42_RS10465 () | 2188634..2190445 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| JNN42_RS10470 () | 2190482..2191123 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN42_RS10475 () | 2191178..2192356 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN42_RS10480 () | 2192490..2192780 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN42_RS10485 () | 2192847..2193203 | + | 357 | WP_001295500.1 | protein YebF | - |
| JNN42_RS10490 () | 2193530..2194189 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| JNN42_RS10495 () | 2194353..2195522 | - | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN42_RS10500 () | 2195579..2196004 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN42_RS10505 () | 2196161..2198221 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| JNN42_RS10510 () | 2198218..2198880 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN42_RS10515 () | 2198904..2199560 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JNN42_RS10520 () | 2199662..2199892 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN42_RS10525 () | 2200031..2200405 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JNN42_RS10530 () | 2200409..2201281 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| JNN42_RS10535 () | 2201294..2201635 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2201663..2201934 | - | 272 | - | - | Antitoxin Detail |
| - () | 2201793..2201896 | + | 104 | - | - | Toxin Detail |
| JNN42_RS10540 () | 2202031..2202687 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| JNN42_RS10545 () | 2202688..2202879 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JNN42_RS10550 () | 2202984..2203220 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN42_RS10555 () | 2203338..2204777 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN42_RS10560 () | 2204857..2207490 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JNN42_RS10565 () | 2207459..2208742 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| JNN42_RS10570 () | 2208872..2209369 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| JNN42_RS10575 () | 2209466..2210164 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN42_RS10580 () | 2210184..2212232 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN42_RS10585 () | 2212424..2213305 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JNN42_RS10590 () | 2213351..2214724 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| JNN42_RS10595 () | 2214901..2215692 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN42_RS10600 () | 2215836..2216075 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JNN42_RS10605 () | 2216234..2216377 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN42_RS10610 () | 2216452..2216739 | + | 288 | WP_001006855.1 | YebO family protein | - |
| JNN42_RS10615 () | 2217409..2217552 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JNN42_RS10620 () | 2217565..2217774 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN42_RS10625 () | 2217940..2218749 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN42_RS10630 () | 2218746..2219312 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN42_RS10635 () | 2219741..2220199 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JNN42_RS10640 () | 2220254..2221105 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN42_RS10645 () | 2221118..2221918 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|