MGE detailed information
MGE type: Genomic_island MGE length: 8550 bp
Accession: NZ_CP068810 Location: 4557160..4565709 Organism: Escherichia coli strain RIVM_C028536 Replicon: chromosome
Accession: NZ_CP068810 Location: 4557160..4565709 Organism: Escherichia coli strain RIVM_C028536 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN60_RS22000 () | 4553691..4554416 | - | 726 | WP_000066559.1 | type 1 fimbria chaperone FimC | - |
| JNN60_RS22005 () | 4554453..4554992 | - | 540 | WP_000824099.1 | type 1 fimbrial protein | - |
| JNN60_RS22010 () | 4555057..4555605 | - | 549 | WP_106106609.1 | type 1 fimbrial major subunit FimA | - |
| JNN60_RS22015 () | 4556086..4556682 | - | 597 | WP_000044708.1 | type 1 fimbria switch DNA invertase FimE | - |
| JNN60_RS22020 () | 4557160..4557762 | - | 603 | WP_001564306.1 | Tyrosine recombinase XerC | VF |
| JNN60_RS22025 () | 4559226..4559942 | + | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN60_RS22030 () | 4559962..4561068 | + | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| JNN60_RS22035 () | 4561133..4562113 | + | 981 | WP_001519307.1 | transposase | - |
| JNN60_RS22040 () | 4562696..4563937 | - | 1242 | Protein_4319 | helicase YjhR | - |
| JNN60_RS22045 () | 4564000..4564299 | + | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| JNN60_RS22050 () | 4564676..4564933 | + | 258 | WP_001550554.1 | hypothetical protein | Toxin Detail |
| JNN60_RS22055 () | 4564945..4565496 | + | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| JNN60_RS22060 () | 4565548..4565709 | + | 162 | WP_001519302.1 | hypothetical protein | - |
| JNN60_RS22065 () | 4565746..4566294 | + | 549 | WP_001519301.1 | hypothetical protein | - |
| JNN60_RS22070 () | 4566421..4566681 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| JNN60_RS22075 () | 4566719..4566835 | + | 117 | Protein_4326 | VOC family protein | - |
| JNN60_RS22080 () | 4567080..4568201 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JNN60_RS22085 () | 4568198..4568476 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JNN60_RS22090 () | 4568488..4569801 | + | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| JNN60_RS22095 () | 4569814..4570620 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|