MGE detailed information
MGE type: Genomic_island MGE length: 18737 bp
Accession: NZ_CP068809 Location: 4324435..4343171 Organism: Escherichia coli strain RIVM_C028497 Replicon: chromosome
Accession: NZ_CP068809 Location: 4324435..4343171 Organism: Escherichia coli strain RIVM_C028497 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN39_RS20700 () | 4319855..4320877 | - | 1023 | WP_000106005.1 | zinc-binding alcohol dehydrogenase family protein | - |
| JNN39_RS20705 () | 4321016..4321921 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| JNN39_RS20710 () | 4322092..4323744 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| JNN39_RS20715 () | 4324435..4325406 | + | 972 | WP_000034589.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| JNN39_RS20720 () | 4325470..4325943 | + | 474 | WP_001235678.1 | TRAP transporter small permease | - |
| JNN39_RS20725 () | 4325940..4327211 | + | 1272 | WP_000118642.1 | TRAP transporter large permease | - |
| JNN39_RS20730 () | 4327254..4328918 | - | 1665 | WP_000919563.1 | hypothetical protein | VF |
| JNN39_RS20735 () | 4329295..4331445 | + | 2151 | WP_001298085.1 | pyruvate/proton symporter BtsT | - |
| JNN39_RS20740 () | 4331563..4331766 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| JNN39_RS20745 () | 4331777..4332733 | + | 957 | WP_001298065.1 | GTPase | - |
| JNN39_RS20750 () | 4332802..4334454 | - | 1653 | WP_001298048.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| JNN39_RS20755 () | 4334732..4337164 | + | 2433 | WP_000819015.1 | DEAD/DEAH box helicase family protein | - |
| JNN39_RS20760 () | 4337231..4338700 | + | 1470 | WP_001540814.1 | type I restriction-modification system subunit M | - |
| JNN39_RS20765 () | 4338700..4340406 | + | 1707 | WP_001100194.1 | restriction endonuclease subunit S | - |
| - () | 4340556..4340632 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4340556..4340632 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4340556..4340632 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4340556..4340632 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4340556..4340632 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4340556..4340632 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4340556..4340632 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4340556..4340632 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| JNN39_RS20770 () | 4340627..4340968 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| JNN39_RS20775 () | 4341015..4343108 | - | 2094 | WP_000648237.1 | DUF262 domain-containing protein | - |
| JNN39_RS20780 () | 4343206..4343286 | - | 81 | WP_020233658.1 | hypothetical protein | - |
| JNN39_RS20785 () | 4343514..4344434 | - | 921 | WP_000181195.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JNN39_RS20790 () | 4344619..4345899 | + | 1281 | WP_001298033.1 | DUF445 domain-containing protein | - |
| JNN39_RS20795 () | 4346015..4347166 | + | 1152 | WP_001298064.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| JNN39_RS20800 () | 4347176..4347943 | + | 768 | WP_001298028.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|