MGE detailed information
MGE type: Genomic_island MGE length: 45375 bp
Accession: NZ_CP068808 Location: 4750948..4796322 Organism: Escherichia coli strain RIVM_C018699 Replicon: chromosome
Accession: NZ_CP068808 Location: 4750948..4796322 Organism: Escherichia coli strain RIVM_C018699 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN47_RS23110 () | 4746467..4747663 | + | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| JNN47_RS23115 () | 4747948..4748229 | + | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| JNN47_RS23120 () | 4748251..4749036 | + | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| JNN47_RS23125 () | 4749097..4750614 | + | 1518 | WP_000997839.1 | propanediol utilization system aldehyde dehydrogenase GrpJ | - |
| JNN47_RS23130 () | 4750638..4750937 | + | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| JNN47_RS23135 () | 4750948..4751523 | + | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| JNN47_RS23140 () | 4751572..4754124 | + | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| JNN47_RS23145 () | 4754233..4755150 | + | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| JNN47_RS23150 () | 4755287..4756192 | + | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| JNN47_RS23155 () | 4756804..4757173 | + | 370 | Protein_4533 | reverse transcriptase/maturase | - |
| JNN47_RS23160 () | 4757173..4757766 | + | 594 | Protein_4534 | maturase | - |
| JNN47_RS23165 () | 4758349..4759578 | + | 1230 | WP_000792585.1 | propanediol utilization sensor histidine kinase GrpP | - |
| JNN47_RS23170 () | 4759595..4760650 | + | 1056 | WP_000494233.1 | HTH-type transcriptional activator Btr | VF |
| JNN47_RS23175 () | 4760779..4761930 | + | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| JNN47_RS23180 () | 4761975..4762520 | + | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| JNN47_RS23185 () | 4762877..4763222 | - | 346 | Protein_4539 | Regulatory protein SoxS | VF |
| JNN47_RS23190 () | 4763654..4764351 | - | 698 | Protein_4540 | IS1 family transposase IS1R | Transposase |
| JNN47_RS23195 () | 4764408..4764620 | - | 213 | Protein_4541 | HTH-type transcriptional regulator TtgR | VF |
| JNN47_RS23200 () | 4764741..4765898 | - | 1158 | Protein_4542 | Multidrug resistance protein MexB | VF |
| JNN47_RS23205 () | 4765989..4766255 | + | 267 | Protein_4543 | IS3 family transposase IS2 | Transposase |
| JNN47_RS23210 () | 4766317..4766542 | - | 226 | Protein_4544 | hypothetical protein | - |
| JNN47_RS23215 () | 4766554..4766787 | - | 234 | WP_000958486.1 | AlpA family transcriptional regulator | - |
| JNN47_RS23220 () | 4766856..4767431 | - | 576 | Protein_4546 | hypothetical protein | - |
| JNN47_RS23225 () | 4767678..4768244 | - | 567 | WP_060579145.1 | inovirus-type Gp2 protein | - |
| JNN47_RS23230 () | 4769545..4770639 | + | 1095 | WP_000370278.1 | sugar kinase | - |
| JNN47_RS23235 () | 4770658..4771908 | - | 1251 | WP_001328687.1 | NupC/NupG family nucleoside CNT transporter | - |
| JNN47_RS23240 () | 4771992..4772927 | - | 936 | WP_001290195.1 | pseudouridine-5'-phosphate glycosidase | - |
| JNN47_RS23245 () | 4772920..4773855 | - | 936 | WP_000332862.1 | pseudouridine kinase | - |
| JNN47_RS23250 () | 4774391..4774843 | - | 453 | WP_000558152.1 | N-acetyltransferase | - |
| JNN47_RS23255 () | 4775364..4776095 | - | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| JNN47_RS23260 () | 4777548..4778771 | - | 1224 | WP_001107219.1 | hypothetical protein | - |
| JNN47_RS23265 () | 4778872..4779756 | + | 885 | WP_001116795.1 | 50S ribosome-binding GTPase | - |
| JNN47_RS23270 () | 4779959..4780639 | + | 681 | WP_021515201.1 | WYL domain-containing protein | - |
| JNN47_RS23275 () | 4780790..4781467 | + | 678 | WP_060579144.1 | hypothetical protein | - |
| JNN47_RS23280 () | 4781473..4781706 | + | 234 | WP_000883181.1 | DUF905 family protein | - |
| JNN47_RS23285 () | 4781796..4782614 | + | 819 | WP_001175155.1 | DUF945 domain-containing protein | - |
| JNN47_RS23290 () | 4782880..4783359 | + | 480 | WP_000706978.1 | antirestriction protein | - |
| JNN47_RS23295 () | 4783374..4783850 | + | 477 | WP_001186193.1 | RadC family protein | - |
| JNN47_RS23300 () | 4783937..4784158 | + | 222 | WP_000692347.1 | DUF987 domain-containing protein | - |
| JNN47_RS23305 () | 4784238..4784606 | + | 369 | WP_001285610.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN47_RS23310 () | 4784695..4785072 | + | 378 | WP_000854820.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| JNN47_RS23315 () | 4785069..4785266 | + | 198 | Protein_4565 | hypothetical protein | - |
| JNN47_RS23320 () | 4785294..4785491 | + | 198 | WP_085949158.1 | DUF957 domain-containing protein | - |
| JNN47_RS23325 () | 4785576..4786136 | + | 561 | Protein_4567 | DUF4942 domain-containing protein | - |
| JNN47_RS23330 () | 4786971..4788509 | + | 1539 | WP_001187178.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JNN47_RS23335 () | 4788875..4790209 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JNN47_RS23340 () | 4790289..4792436 | + | 2148 | WP_001550474.1 | lysine decarboxylase CadA | - |
| JNN47_RS23345 () | 4792495..4793952 | + | 1458 | WP_001550473.1 | dipeptide/tripeptide permease DtpC | - |
| JNN47_RS23350 () | 4794189..4795706 | + | 1518 | WP_001550472.1 | lysine--tRNA ligase | - |
| JNN47_RS23355 () | 4795825..4795998 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JNN47_RS23360 () | 4796026..4796322 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JNN47_RS23365 () | 4796551..4796823 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JNN47_RS23370 () | 4796835..4797065 | - | 231 | WP_001550470.1 | (4Fe-4S)-binding protein | - |
| JNN47_RS23375 () | 4797245..4798876 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| JNN47_RS23380 () | 4798873..4799592 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|