MGE detailed information
MGE type: Prophage MGE length: 85854 bp
Accession: NZ_CP068808 Location: 2194977..2280830 Organism: Escherichia coli strain RIVM_C018699 Replicon: chromosome
Accession: NZ_CP068808 Location: 2194977..2280830 Organism: Escherichia coli strain RIVM_C018699 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN47_RS10540 () | 2192025..2192996 | - | 972 | WP_000564730.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| JNN47_RS10545 () | 2192993..2193736 | - | 744 | WP_000019591.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| JNN47_RS10550 () | 2193777..2194172 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| JNN47_RS10555 () | 2194225..2194995 | - | 771 | WP_042196262.1 | DUF72 domain-containing protein | - |
| JNN47_RS10560 () | 2194977..2196290 | - | 1314 | WP_000362007.1 | Putative defective protein IntQ ; Integrase | Integrase |
| JNN47_RS10565 () | 2196346..2196582 | - | 237 | WP_000528717.1 | excisionase family protein | - |
| JNN47_RS10570 () | 2196591..2196737 | - | 147 | WP_001030145.1 | hypothetical protein | - |
| JNN47_RS10575 () | 2196741..2196983 | - | 243 | WP_000457737.1 | DUF4222 domain-containing protein | - |
| JNN47_RS10580 () | 2197107..2197676 | - | 570 | WP_000586690.1 | hypothetical protein | - |
| JNN47_RS10585 () | 2197673..2198422 | - | 750 | WP_001028556.1 | ORF6N domain-containing protein | - |
| JNN47_RS10590 () | 2198466..2199293 | - | 828 | WP_000734576.1 | hypothetical protein | - |
| JNN47_RS10595 () | 2199539..2199931 | - | 393 | WP_000566776.1 | hypothetical protein | - |
| JNN47_RS10600 () | 2200118..2200333 | - | 216 | WP_000002323.1 | hypothetical protein | - |
| JNN47_RS10605 () | 2200333..2200692 | - | 360 | WP_000148631.1 | hypothetical protein | - |
| JNN47_RS10610 () | 2200877..2201068 | - | 192 | WP_108433741.1 | hypothetical protein | - |
| JNN47_RS10615 () | 2201065..2201256 | - | 192 | WP_108433740.1 | hypothetical protein | - |
| JNN47_RS10620 () | 2201258..2201674 | - | 417 | WP_108433739.1 | helix-turn-helix transcriptional regulator | - |
| JNN47_RS10625 () | 2201771..2202427 | - | 657 | WP_000838346.1 | helix-turn-helix domain-containing protein | - |
| JNN47_RS10630 () | 2203475..2205133 | + | 1659 | WP_000424041.1 | DEAD/DEAH box helicase | - |
| JNN47_RS10635 () | 2205135..2206103 | + | 969 | WP_000844628.1 | toprim domain-containing protein | - |
| JNN47_RS10640 () | 2206103..2206960 | + | 858 | WP_001258397.1 | hypothetical protein | - |
| JNN47_RS10645 () | 2206960..2207775 | + | 816 | WP_202849952.1 | antitermination protein | - |
| JNN47_RS10650 () | 2207912..2208856 | - | 945 | WP_000576620.1 | hypothetical protein | - |
| JNN47_RS10665 () | 2209669..2209884 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| JNN47_RS10670 () | 2209889..2210239 | + | 351 | WP_000193280.1 | YdfR family protein | - |
| JNN47_RS10675 () | 2210303..2210836 | + | 534 | WP_000992100.1 | lysozyme | - |
| JNN47_RS10680 () | 2211053..2211238 | + | 186 | WP_001228685.1 | Rz1 family lipoprotein | - |
| JNN47_RS10685 () | 2211456..2211722 | + | 267 | WP_001100260.1 | hypothetical protein | - |
| JNN47_RS10690 () | 2211728..2212267 | - | 540 | WP_000351660.1 | YfbU family protein | - |
| JNN47_RS10695 () | 2212406..2212756 | + | 351 | WP_001111090.1 | HNH endonuclease | - |
| JNN47_RS10700 () | 2212905..2213387 | + | 483 | WP_014639227.1 | phage terminase small subunit P27 family | - |
| JNN47_RS10705 () | 2213387..2215144 | + | 1758 | WP_016245372.1 | terminase large subunit | - |
| JNN47_RS10710 () | 2215141..2215302 | + | 162 | WP_000811487.1 | hypothetical protein | - |
| JNN47_RS10715 () | 2215292..2216518 | + | 1227 | WP_000923129.1 | phage portal protein | - |
| JNN47_RS10720 () | 2216511..2217110 | + | 600 | WP_000999828.1 | HK97 family phage prohead protease | - |
| JNN47_RS10725 () | 2217125..2218342 | + | 1218 | WP_000766109.1 | phage major capsid protein | - |
| JNN47_RS10730 () | 2218419..2218736 | + | 318 | WP_000719066.1 | head-tail connector protein | - |
| JNN47_RS10735 () | 2218745..2219083 | + | 339 | WP_001147814.1 | phage head closure protein | - |
| JNN47_RS10740 () | 2219080..2219529 | + | 450 | WP_000968644.1 | HK97 gp10 family phage protein | - |
| JNN47_RS10745 () | 2219526..2219870 | + | 345 | WP_001206698.1 | DUF3168 domain-containing protein | - |
| JNN47_RS10750 () | 2219930..2220634 | + | 705 | WP_000097528.1 | immunoglobulin domain-containing protein | - |
| JNN47_RS10755 () | 2220649..2221020 | + | 372 | WP_000164661.1 | phage tail assembly chaperone | - |
| JNN47_RS10760 () | 2221044..2221322 | + | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| JNN47_RS10765 () | 2221369..2224608 | + | 3240 | WP_202849953.1 | phage tail tape measure protein | - |
| JNN47_RS10770 () | 2224601..2224942 | + | 342 | WP_001115183.1 | phage tail protein | - |
| JNN47_RS10775 () | 2224942..2225640 | + | 699 | WP_106494053.1 | phage minor tail protein L | - |
| JNN47_RS10780 () | 2225646..2226389 | + | 744 | WP_124056273.1 | C40 family peptidase | - |
| JNN47_RS10785 () | 2226287..2226934 | + | 648 | WP_000741589.1 | tail assembly protein | - |
| JNN47_RS10790 () | 2226995..2230801 | + | 3807 | WP_124056274.1 | DUF1983 domain-containing protein | - |
| JNN47_RS10795 () | 2230869..2231468 | + | 600 | WP_124056275.1 | Outer membrane protein X | VF |
| JNN47_RS10800 () | 2231533..2233599 | + | 2067 | WP_124056276.1 | prophage tail fiber N-terminal domain-containing protein | - |
| JNN47_RS10805 () | 2233596..2233874 | + | 279 | WP_202849955.1 | hypothetical protein | - |
| JNN47_RS10810 () | 2233884..2234171 | + | 288 | WP_001513565.1 | hypothetical protein | - |
| JNN47_RS10815 () | 2234289..2234537 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| JNN47_RS10820 () | 2234892..2235458 | - | 567 | WP_001551241.1 | hydrolase | - |
| JNN47_RS10825 () | 2235768..2237540 | + | 1773 | WP_001551240.1 | aspartate--tRNA ligase | - |
| JNN47_RS10830 () | 2237658..2238110 | + | 453 | WP_001308712.1 | dihydroneopterin triphosphate diphosphatase | - |
| JNN47_RS10835 () | 2238139..2238879 | + | 741 | WP_000907234.1 | putative transcriptional regulatory protein YebC | VF |
| JNN47_RS10840 () | 2238914..2239435 | + | 522 | WP_001551239.1 | crossover junction endodeoxyribonuclease RuvC | - |
| JNN47_RS10845 () | 2239437..2240039 | - | 603 | WP_001024929.1 | YebB family permuted papain-like enzyme | - |
| JNN47_RS10850 () | 2240110..2240175 | + | 66 | WP_010723105.1 | stress response small protein YobI | - |
| JNN47_RS10855 () | 2240314..2240925 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| JNN47_RS10860 () | 2240934..2241944 | + | 1011 | WP_000568522.1 | Holliday junction branch migration DNA helicase RuvB | - |
| JNN47_RS10865 () | 2242094..2242879 | - | 786 | WP_000571479.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| JNN47_RS10870 () | 2242876..2243631 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| JNN47_RS10875 () | 2243710..2244642 | + | 933 | WP_011076428.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| JNN47_RS10880 () | 2244658..2245980 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| JNN47_RS10885 () | 2246100..2247071 | + | 972 | WP_001551238.1 | Lipid A biosynthesis myristoyltransferase | VF |
| JNN47_RS10890 () | 2247203..2248645 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| JNN47_RS10895 () | 2248773..2249642 | - | 870 | WP_001056694.1 | DNA-binding transcriptional regulator HexR | - |
| JNN47_RS10900 () | 2249980..2251455 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| JNN47_RS10905 () | 2251690..2253501 | + | 1812 | WP_001069467.1 | phosphogluconate dehydratase | - |
| JNN47_RS10910 () | 2253538..2254179 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN47_RS10915 () | 2254234..2255412 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN47_RS10920 () | 2255546..2255836 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN47_RS10925 () | 2255903..2256259 | + | 357 | WP_001295500.1 | protein YebF | - |
| JNN47_RS10930 () | 2256586..2257245 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| JNN47_RS10935 () | 2257409..2258578 | - | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN47_RS10940 () | 2258635..2259060 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN47_RS10945 () | 2259217..2261277 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| JNN47_RS10950 () | 2261274..2261936 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN47_RS10955 () | 2261960..2262616 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JNN47_RS10960 () | 2262718..2262948 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN47_RS10965 () | 2263087..2263461 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JNN47_RS10970 () | 2263465..2264337 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| JNN47_RS10975 () | 2264350..2264691 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2264719..2264990 | - | 272 | - | - | Antitoxin Detail |
| - () | 2264849..2264952 | + | 104 | - | - | Toxin Detail |
| JNN47_RS10980 () | 2265087..2265743 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| JNN47_RS10985 () | 2265744..2265935 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JNN47_RS10990 () | 2266040..2266276 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN47_RS10995 () | 2266394..2267833 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN47_RS11000 () | 2267913..2270546 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JNN47_RS11005 () | 2270515..2271798 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| JNN47_RS11010 () | 2271928..2272425 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| JNN47_RS11015 () | 2272522..2273220 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN47_RS11020 () | 2273240..2275288 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN47_RS11025 () | 2275480..2276361 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JNN47_RS11030 () | 2276407..2277780 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| JNN47_RS11035 () | 2277957..2278748 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN47_RS11040 () | 2278892..2279131 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JNN47_RS11045 () | 2279290..2279433 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN47_RS11050 () | 2279508..2279795 | + | 288 | WP_001006855.1 | YebO family protein | - |
| JNN47_RS11055 () | 2280465..2280608 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JNN47_RS11060 () | 2280621..2280830 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN47_RS11065 () | 2280996..2281805 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN47_RS11070 () | 2281802..2282368 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN47_RS11075 () | 2282797..2283255 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JNN47_RS11080 () | 2283310..2284161 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN47_RS11085 () | 2284174..2284974 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|