MGE detailed information
MGE type: Prophage MGE length: 15812 bp
Accession: NZ_CP068806 Location: 2709993..2725804 Organism: Escherichia coli strain RIVM_C018576 Replicon: chromosome
Accession: NZ_CP068806 Location: 2709993..2725804 Organism: Escherichia coli strain RIVM_C018576 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN57_RS13110 () | 2705433..2706806 | + | 1374 | WP_001309553.1 | MFS transporter | - |
| JNN57_RS13115 () | 2706852..2707733 | - | 882 | WP_000984517.1 | protease HtpX | - |
| JNN57_RS13120 () | 2707925..2709973 | - | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN57_RS13125 () | 2709993..2710691 | - | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN57_RS13130 () | 2710788..2711285 | - | 498 | WP_001033105.1 | L-methionine (R)-S-oxide reductase | - |
| JNN57_RS13135 () | 2711415..2712698 | + | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| JNN57_RS13140 () | 2712667..2715300 | + | 2634 | WP_001306757.1 | lipid-binding membrane homeostasis protein YebT | - |
| JNN57_RS13145 () | 2715380..2716819 | + | 1440 | WP_001309555.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN57_RS13150 () | 2716937..2717173 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN57_RS13155 () | 2717278..2717469 | + | 192 | WP_001296140.1 | YebW family protein | - |
| JNN57_RS13160 () | 2717470..2718126 | - | 657 | WP_000812712.1 | protein-serine/threonine phosphatase | - |
| - () | 2718223..2718494 | + | 272 | - | - | Antitoxin Detail |
| - () | 2718261..2718364 | - | 104 | - | - | Toxin Detail |
| JNN57_RS13165 () | 2718522..2718863 | - | 342 | WP_000976481.1 | YebY family protein | - |
| JNN57_RS13170 () | 2718876..2719748 | - | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| JNN57_RS13175 () | 2719752..2720126 | - | 375 | WP_000204705.1 | CopC domain-containing protein YobA | - |
| JNN57_RS13180 () | 2720265..2720495 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN57_RS13185 () | 2720597..2721253 | + | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein | - |
| JNN57_RS13190 () | 2721277..2721939 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN57_RS13195 () | 2721936..2723996 | - | 2061 | WP_000936971.1 | oligopeptidase B | - |
| JNN57_RS13200 () | 2724153..2724578 | - | 426 | WP_000064873.1 | IS200/IS605-like element ISEc46 family transposase | - |
| JNN57_RS13205 () | 2724635..2725804 | + | 1170 | WP_000942660.1 | transposase | - |
| JNN57_RS13210 () | 2725968..2726627 | - | 660 | WP_000024735.1 | tellurite resistance TerB family protein | - |
| JNN57_RS13215 () | 2726954..2727310 | - | 357 | WP_001295500.1 | protein YebF | - |
| JNN57_RS13220 () | 2727377..2727667 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN57_RS13225 () | 2727801..2728979 | + | 1179 | WP_000173461.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN57_RS13230 () | 2729034..2729675 | - | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|