MGE detailed information
MGE type: Prophage MGE length: 23422 bp
Accession: NZ_CP068804 Location: 2277875..2301296 Organism: Escherichia coli strain RIVM_C018563 Replicon: chromosome
Accession: NZ_CP068804 Location: 2277875..2301296 Organism: Escherichia coli strain RIVM_C018563 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN37_RS10985 () | 2274004..2274645 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN37_RS10990 () | 2274700..2275878 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN37_RS10995 () | 2276012..2276302 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN37_RS11000 () | 2276369..2276725 | + | 357 | WP_001295500.1 | protein YebF | - |
| JNN37_RS11005 () | 2277052..2277711 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| JNN37_RS11010 () | 2277875..2279044 | - | 1170 | WP_001551234.1 | transposase | - |
| JNN37_RS11015 () | 2279101..2279526 | + | 426 | WP_000064873.1 | IS200/IS605-like element ISEc46 family transposase | - |
| JNN37_RS11020 () | 2279683..2281743 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| JNN37_RS11025 () | 2281740..2282402 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN37_RS11030 () | 2282426..2283082 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JNN37_RS11035 () | 2283184..2283414 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN37_RS11040 () | 2283553..2283927 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JNN37_RS11045 () | 2283931..2284803 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| JNN37_RS11050 () | 2284816..2285157 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2285185..2285456 | - | 272 | - | - | Antitoxin Detail |
| - () | 2285315..2285418 | + | 104 | - | - | Toxin Detail |
| JNN37_RS11055 () | 2285553..2286209 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| JNN37_RS11060 () | 2286210..2286401 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JNN37_RS11065 () | 2286506..2286742 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN37_RS11070 () | 2286860..2288299 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN37_RS11075 () | 2288379..2291012 | - | 2634 | WP_001306757.1 | lipid-binding membrane homeostasis protein YebT | - |
| JNN37_RS11080 () | 2290981..2292264 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| JNN37_RS11085 () | 2292394..2292891 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| JNN37_RS11090 () | 2292988..2293686 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN37_RS11095 () | 2293706..2295754 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN37_RS11100 () | 2295946..2296827 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JNN37_RS11105 () | 2296873..2298246 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| JNN37_RS11110 () | 2298423..2299214 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN37_RS11115 () | 2299358..2299597 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JNN37_RS11120 () | 2299756..2299899 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN37_RS11125 () | 2299974..2300261 | + | 288 | WP_001006855.1 | YebO family protein | - |
| JNN37_RS11130 () | 2300931..2301074 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JNN37_RS11135 () | 2301087..2301296 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN37_RS11140 () | 2301462..2302271 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN37_RS11145 () | 2302268..2302834 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN37_RS11150 () | 2303263..2303721 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JNN37_RS11155 () | 2303776..2304627 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN37_RS11160 () | 2304640..2305440 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|