MGE detailed information
MGE type: Genomic_island MGE length: 11770 bp
Accession: NZ_CP068803 Location: 620579..632348 Organism: Escherichia coli strain RIVM_C018404 Replicon: chromosome
Accession: NZ_CP068803 Location: 620579..632348 Organism: Escherichia coli strain RIVM_C018404 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN34_RS02950 () | 615580..616014 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| JNN34_RS02955 () | 616032..616910 | - | 879 | WP_001315856.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| JNN34_RS02960 () | 616900..617679 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| JNN34_RS02965 () | 617690..618163 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| JNN34_RS02970 () | 618186..619466 | - | 1281 | WP_000681921.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| JNN34_RS02975 () | 619715..620524 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| JNN34_RS02980 () | 620579..621043 | - | 465 | WP_000347266.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| JNN34_RS02985 () | 621043..621378 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| JNN34_RS02990 () | 621527..623098 | - | 1572 | WP_001273741.1 | galactarate dehydratase | - |
| JNN34_RS02995 () | 623473..624807 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| JNN34_RS03000 () | 624823..625593 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| JNN34_RS03005 () | 625623..626513 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| JNN34_RS03010 () | 626610..627755 | + | 1146 | WP_074684101.1 | glycerate 2-kinase | - |
| JNN34_RS03020 () | 628559..629746 | - | 1188 | WP_000484577.1 | YhaC family protein | - |
| JNN34_RS03025 () | 629768..630307 | - | 540 | WP_074684099.1 | hypothetical protein | - |
| JNN34_RS03030 () | 630563..630907 | - | 345 | WP_000145820.1 | transcriptional activator TdcR | - |
| JNN34_RS03035 () | 631096..632034 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| JNN34_RS03040 () | 632133..632342 | + | 210 | Protein_595 | threonine ammonia-lyase | - |
| JNN34_RS03045 () | 632359..633056 | - | 698 | Protein_596 | IS1 family transposase | - |
| JNN34_RS03050 () | 633114..633899 | + | 786 | Protein_597 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| JNN34_RS03055 () | 633921..635252 | + | 1332 | WP_000107720.1 | threonine/serine transporter TdcC | - |
| JNN34_RS03060 () | 635278..636486 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|