MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP068801 Location: 4080694..4091452 Organism: Escherichia coli strain RIVM_C018220 Replicon: chromosome
Accession: NZ_CP068801 Location: 4080694..4091452 Organism: Escherichia coli strain RIVM_C018220 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN52_RS19745 () | 4076040..4076822 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JNN52_RS19750 () | 4077138..4080347 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| JNN52_RS19755 () | 4080508..4080648 | + | 141 | WP_001308408.1 | ash family protein | - |
| JNN52_RS19760 () | 4080694..4081164 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| JNN52_RS19765 () | 4081161..4081263 | + | 103 | Protein_3873 | helix-turn-helix domain-containing protein | - |
| JNN52_RS19770 () | 4081355..4081513 | + | 159 | Protein_3874 | integrase | - |
| JNN52_RS19780 () | 4081718..4082971 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JNN52_RS19785 () | 4082983..4084086 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JNN52_RS19790 () | 4084374..4085429 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JNN52_RS19795 () | 4085468..4085869 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JNN52_RS19800 () | 4085927..4087171 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4086587..4086667 | - | 81 | NuclAT_11 | - | - |
| - () | 4086587..4086667 | - | 81 | NuclAT_11 | - | - |
| - () | 4086587..4086667 | - | 81 | NuclAT_11 | - | - |
| - () | 4086587..4086667 | - | 81 | NuclAT_11 | - | - |
| JNN52_RS19805 () | 4087263..4087721 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JNN52_RS19810 () | 4087982..4089439 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JNN52_RS19815 () | 4089496..4089848 | - | 353 | Protein_3882 | peptide chain release factor H | - |
| JNN52_RS19820 () | 4089844..4090050 | - | 207 | Protein_3883 | RtcB family protein | - |
| JNN52_RS19825 () | 4090296..4090748 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| JNN52_RS19830 () | 4090758..4091156 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN52_RS19835 () | 4091159..4091452 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN52_RS19840 () | 4091504..4092559 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| JNN52_RS19845 () | 4092630..4093415 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| JNN52_RS19850 () | 4093387..4095099 | + | 1713 | Protein_3889 | flagellar biosynthesis protein FlhA | - |
| JNN52_RS19855 () | 4095204..4095482 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JNN52_RS19860 () | 4095475..4095831 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|