MGE detailed information
MGE type: Prophage MGE length: 23422 bp
Accession: NZ_CP068800 Location: 2327110..2350531 Organism: Escherichia coli strain RIVM_C017997 Replicon: chromosome
Accession: NZ_CP068800 Location: 2327110..2350531 Organism: Escherichia coli strain RIVM_C017997 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN45_RS11220 () | 2323239..2323880 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| JNN45_RS11225 () | 2323935..2325113 | - | 1179 | WP_001551236.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| JNN45_RS11230 () | 2325247..2325537 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| JNN45_RS11235 () | 2325604..2325960 | + | 357 | WP_001295500.1 | protein YebF | - |
| JNN45_RS11240 () | 2326287..2326946 | + | 660 | WP_000024733.1 | tellurite resistance TerB family protein | - |
| JNN45_RS11245 () | 2327110..2328279 | - | 1170 | WP_001551234.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN45_RS11250 () | 2328336..2328761 | + | 426 | WP_000064873.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JNN45_RS11255 () | 2328918..2330978 | + | 2061 | WP_001551233.1 | oligopeptidase B | - |
| JNN45_RS11260 () | 2330975..2331637 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| JNN45_RS11265 () | 2331661..2332317 | - | 657 | WP_000011653.1 | carbon-nitrogen hydrolase family protein | - |
| JNN45_RS11270 () | 2332419..2332649 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| JNN45_RS11275 () | 2332788..2333162 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| JNN45_RS11280 () | 2333166..2334038 | + | 873 | WP_001551232.1 | copper homeostasis membrane protein CopD | - |
| JNN45_RS11285 () | 2334051..2334392 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - () | 2334420..2334691 | - | 272 | - | - | Antitoxin Detail |
| - () | 2334550..2334653 | + | 104 | - | - | Toxin Detail |
| JNN45_RS11290 () | 2334788..2335444 | + | 657 | WP_001551231.1 | protein-serine/threonine phosphatase | - |
| JNN45_RS11295 () | 2335445..2335636 | - | 192 | WP_001296140.1 | YebW family protein | - |
| JNN45_RS11300 () | 2335741..2335977 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| JNN45_RS11305 () | 2336095..2337534 | - | 1440 | WP_024186439.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| JNN45_RS11310 () | 2337614..2340247 | - | 2634 | WP_001306757.1 | hypothetical protein | VF |
| JNN45_RS11315 () | 2340216..2341499 | - | 1284 | WP_001316436.1 | membrane integrity lipid transport subunit YebS | - |
| JNN45_RS11320 () | 2341629..2342126 | + | 498 | WP_001043876.1 | L-methionine (R)-S-oxide reductase | - |
| JNN45_RS11325 () | 2342223..2342921 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| JNN45_RS11330 () | 2342941..2344989 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| JNN45_RS11335 () | 2345181..2346062 | + | 882 | WP_000984517.1 | protease HtpX | - |
| JNN45_RS11340 () | 2346108..2347481 | - | 1374 | WP_001551227.1 | MFS transporter | - |
| JNN45_RS11345 () | 2347658..2348449 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| JNN45_RS11350 () | 2348593..2348832 | - | 240 | WP_001211011.1 | hypothetical protein | - |
| JNN45_RS11355 () | 2348991..2349134 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| JNN45_RS11360 () | 2349209..2349496 | + | 288 | WP_001006855.1 | YebO family protein | - |
| JNN45_RS11365 () | 2350166..2350309 | + | 144 | WP_001295496.1 | YobF family protein | - |
| JNN45_RS11370 () | 2350322..2350531 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| JNN45_RS11375 () | 2350697..2351506 | + | 810 | WP_000010109.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| JNN45_RS11380 () | 2351503..2352069 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| JNN45_RS11385 () | 2352498..2352956 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| JNN45_RS11390 () | 2353011..2353862 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| JNN45_RS11395 () | 2353875..2354675 | - | 801 | WP_000406928.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|