MGE detailed information
MGE type: Genomic_island MGE length: 27249 bp
Accession: NZ_CP068799 Location: 4432230..4459478 Organism: Escherichia coli strain RIVM_C017887 Replicon: chromosome
Accession: NZ_CP068799 Location: 4432230..4459478 Organism: Escherichia coli strain RIVM_C017887 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN46_RS21285 () | 4428761..4429486 | - | 726 | WP_000066559.1 | type 1 fimbria chaperone FimC | - |
| JNN46_RS21290 () | 4429523..4430062 | - | 540 | WP_000824098.1 | type 1 fimbrial protein | - |
| JNN46_RS21295 () | 4430127..4430675 | - | 549 | WP_000695567.1 | type 1 fimbrial major subunit FimA | - |
| JNN46_RS21300 () | 4431156..4431752 | - | 597 | WP_000044708.1 | type 1 fimbria switch DNA invertase FimE | - |
| JNN46_RS21305 () | 4432230..4432832 | - | 603 | WP_000790574.1 | Tyrosine recombinase XerC | VF |
| JNN46_RS21310 () | 4434297..4435013 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN46_RS21315 () | 4435033..4436139 | + | 1107 | WP_001298082.1 | N-acetylneuraminate epimerase | - |
| JNN46_RS21320 () | 4436204..4437184 | + | 981 | WP_000991428.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| JNN46_RS21325 () | 4437192..4437314 | - | 123 | WP_001298017.1 | hypothetical protein | - |
| JNN46_RS21330 () | 4437396..4438268 | + | 873 | WP_000168586.1 | HNH endonuclease | - |
| JNN46_RS21335 () | 4438313..4438492 | + | 180 | WP_001298063.1 | hypothetical protein | - |
| JNN46_RS21340 () | 4438891..4440927 | - | 2037 | WP_000417001.1 | hypothetical protein | - |
| JNN46_RS21345 () | 4441879..4442037 | - | 159 | WP_001467148.1 | hypothetical protein | - |
| JNN46_RS21350 () | 4442116..4442313 | - | 198 | WP_000839272.1 | DUF957 domain-containing protein | - |
| JNN46_RS21355 () | 4442325..4442813 | - | 489 | WP_000761683.1 | hypothetical protein | - |
| JNN46_RS21360 () | 4442810..4443187 | - | 378 | WP_001094426.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN46_RS21365 () | 4443277..4443645 | - | 369 | WP_001285575.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN46_RS21370 () | 4443725..4443946 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| JNN46_RS21375 () | 4444033..4444509 | - | 477 | WP_001298074.1 | RadC family protein | - |
| JNN46_RS21380 () | 4444524..4445009 | - | 486 | WP_000213697.1 | antirestriction protein | - |
| JNN46_RS21385 () | 4445100..4445918 | - | 819 | WP_001175160.1 | DUF945 domain-containing protein | - |
| JNN46_RS21390 () | 4446008..4446241 | - | 234 | WP_001278290.1 | DUF905 family protein | - |
| JNN46_RS21395 () | 4446247..4446924 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| JNN46_RS21400 () | 4447072..4447752 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| JNN46_RS21405 () | 4447955..4448839 | - | 885 | WP_000010377.1 | 50S ribosome-binding GTPase | - |
| JNN46_RS21410 () | 4448940..4450163 | + | 1224 | WP_001107221.1 | hypothetical protein | - |
| JNN46_RS21415 () | 4451646..4452377 | + | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| JNN46_RS21420 () | 4452705..4453583 | + | 879 | WP_000769120.1 | restriction endonuclease | - |
| JNN46_RS21425 () | 4453639..4454318 | - | 680 | Protein_4199 | transposase | - |
| JNN46_RS21430 () | 4454571..4454687 | + | 117 | Protein_4200 | phosphoporin PhoE | - |
| JNN46_RS21435 () | 4454689..4454822 | + | 134 | Protein_4201 | phosphate-starvation-inducible protein PsiE | - |
| JNN46_RS21440 () | 4454897..4455217 | - | 321 | Protein_4202 | hypothetical protein | - |
| JNN46_RS21445 () | 4455306..4456328 | + | 1023 | WP_001298025.1 | IS21 family transposase IS100kyp | Transposase |
| JNN46_RS21450 () | 4456325..4457107 | + | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| JNN46_RS21455 () | 4457174..4458307 | - | 1134 | Protein_4205 | Na+/H+ antiporter NhaC | - |
| JNN46_RS21460 () | 4458300..4459478 | - | 1179 | WP_001534804.1 | pyridoxal phosphate-dependent aminotransferase | - |
| JNN46_RS21465 () | 4459952..4461165 | + | 1214 | WP_164504460.1 | IS3 family transposase | - |
| JNN46_RS21470 () | 4461456..4462034 | + | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| JNN46_RS21475 () | 4462057..4462875 | + | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| JNN46_RS21480 () | 4462875..4463393 | + | 519 | WP_001217008.1 | hypothetical protein | - |
| JNN46_RS21485 () | 4463913..4464191 | + | 279 | WP_000502008.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|