MGE detailed information
MGE type: Genomic_island MGE length: 18737 bp
Accession: NZ_CP068799 Location: 4388364..4407100 Organism: Escherichia coli strain RIVM_C017887 Replicon: chromosome
Accession: NZ_CP068799 Location: 4388364..4407100 Organism: Escherichia coli strain RIVM_C017887 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN46_RS21090 () | 4383784..4384806 | - | 1023 | WP_000106005.1 | zinc-binding alcohol dehydrogenase family protein | - |
| JNN46_RS21095 () | 4384945..4385850 | + | 906 | WP_000091596.1 | GntR family transcriptional regulator | - |
| JNN46_RS21100 () | 4386021..4387673 | - | 1653 | WP_001298060.1 | Na+/H+ antiporter | - |
| JNN46_RS21105 () | 4388364..4389335 | + | 972 | WP_000034589.1 | C4-dicarboxylate TRAP transporter substrate-binding protein | - |
| JNN46_RS21110 () | 4389399..4389872 | + | 474 | WP_001235678.1 | TRAP transporter small permease | - |
| JNN46_RS21115 () | 4389869..4391140 | + | 1272 | WP_000118642.1 | TRAP transporter large permease | - |
| JNN46_RS21120 () | 4391183..4392847 | - | 1665 | WP_000919563.1 | Methyl-accepting chemotaxis protein I | VF |
| JNN46_RS21125 () | 4393224..4395374 | + | 2151 | WP_001298085.1 | pyruvate/proton symporter BtsT | - |
| JNN46_RS21130 () | 4395492..4395695 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| JNN46_RS21135 () | 4395706..4396662 | + | 957 | WP_001298065.1 | GTPase | - |
| JNN46_RS21140 () | 4396731..4398383 | - | 1653 | WP_001298048.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| JNN46_RS21145 () | 4398661..4401093 | + | 2433 | WP_000819015.1 | DEAD/DEAH box helicase family protein | - |
| JNN46_RS21150 () | 4401160..4402629 | + | 1470 | WP_001540814.1 | type I restriction-modification system subunit M | - |
| JNN46_RS21155 () | 4402629..4404335 | + | 1707 | WP_001100194.1 | restriction endonuclease subunit S | - |
| - () | 4404485..4404561 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4404485..4404561 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4404485..4404561 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4404485..4404561 | - | 77 | NuclAT_6 | - | Antitoxin Detail |
| - () | 4404485..4404561 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4404485..4404561 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4404485..4404561 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| - () | 4404485..4404561 | - | 77 | NuclAT_7 | - | Antitoxin Detail |
| JNN46_RS21160 () | 4404556..4404897 | + | 342 | WP_000132614.1 | endoribonuclease SymE | Toxin Detail |
| JNN46_RS21165 () | 4404944..4407037 | - | 2094 | WP_000648237.1 | DUF262 domain-containing protein | - |
| JNN46_RS21170 () | 4407135..4407215 | - | 81 | WP_020233658.1 | hypothetical protein | - |
| JNN46_RS21175 () | 4407443..4408363 | - | 921 | WP_000181195.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| JNN46_RS21180 () | 4408548..4409828 | + | 1281 | WP_001298033.1 | DUF445 domain-containing protein | - |
| JNN46_RS21185 () | 4409944..4411095 | + | 1152 | WP_001298064.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| JNN46_RS21190 () | 4411105..4411872 | + | 768 | WP_001298028.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|