MGE detailed information
MGE type: Genomic_island MGE length: 76674 bp
Accession: NZ_CP068799 Location: 3858218..3934891 Organism: Escherichia coli strain RIVM_C017887 Replicon: chromosome
Accession: NZ_CP068799 Location: 3858218..3934891 Organism: Escherichia coli strain RIVM_C017887 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN46_RS18465 () | 3853375..3853962 | + | 588 | WP_001298544.1 | transcriptional regulator BetI | - |
| JNN46_RS18470 () | 3853976..3855448 | + | 1473 | WP_000089053.1 | betaine-aldehyde dehydrogenase | - |
| JNN46_RS18475 () | 3855462..3857132 | + | 1671 | WP_001159127.1 | choline dehydrogenase | - |
| JNN46_RS18480 () | 3858218..3858781 | + | 564 | WP_001335180.1 | Tyrosine recombinase XerD | VF |
| JNN46_RS18485 () | 3859111..3859905 | + | 795 | WP_001335181.1 | LuxR family transcriptional regulator HyxR | - |
| JNN46_RS18490 () | 3860059..3860820 | + | 762 | WP_001213042.1 | protein HyxA | - |
| JNN46_RS18495 () | 3860862..3861944 | + | 1083 | Protein_3625 | adhesin | - |
| JNN46_RS18500 () | 3861966..3863159 | + | 1194 | WP_071787751.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| JNN46_RS18505 () | 3863343..3864011 | + | 669 | WP_001005267.1 | membrane protein | - |
| JNN46_RS18510 () | 3864254..3864949 | - | 696 | WP_001298555.1 | lactate utilization protein C | - |
| JNN46_RS18515 () | 3864942..3866369 | - | 1428 | WP_000023923.1 | iron-sulfur cluster-binding protein | - |
| JNN46_RS18520 () | 3866380..3867099 | - | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| JNN46_RS18525 () | 3867626..3868480 | - | 855 | WP_000339603.1 | DNA-binding transcriptional regulator RclR | - |
| JNN46_RS18530 () | 3868707..3870032 | + | 1326 | WP_001046335.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| JNN46_RS18535 () | 3870141..3870377 | + | 237 | WP_000474088.1 | DUF1471 domain-containing protein | - |
| JNN46_RS18540 () | 3870389..3870982 | + | 594 | WP_001298546.1 | reactive chlorine species resistance protein RclC | - |
| JNN46_RS18545 () | 3871142..3872011 | - | 870 | WP_001295799.1 | aldo/keto reductase | - |
| JNN46_RS18550 () | 3872259..3873116 | + | 858 | WP_000620997.1 | Right origin-binding protein | VF |
| JNN46_RS18555 () | 3873241..3877488 | - | 4248 | WP_000092548.1 | Invasin | VF |
| JNN46_RS18560 () | 3878054..3878905 | + | 852 | WP_001174452.1 | aldo/keto reductase | - |
| JNN46_RS18565 () | 3878932..3879921 | + | 990 | WP_001172293.1 | aldo/keto reductase | - |
| JNN46_RS18570 () | 3879952..3880845 | - | 894 | WP_000910711.1 | HTH-type transcriptional regulator PgrR | VF |
| JNN46_RS18575 () | 3881045..3881971 | - | 927 | WP_001304867.1 | HTH-type transcriptional regulator PgrR | VF |
| JNN46_RS18580 () | 3882128..3883048 | + | 921 | WP_000860032.1 | alpha/beta hydrolase | - |
| JNN46_RS18585 () | 3883220..3884362 | + | 1143 | WP_000182341.1 | NADH-dependent flavin oxidoreductase | - |
| JNN46_RS18590 () | 3884835..3884936 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| JNN46_RS18595 () | 3885301..3885564 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| JNN46_RS18600 () | 3885564..3885704 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| JNN46_RS18605 () | 3885774..3885964 | - | 191 | Protein_3647 | hypothetical protein | - |
| JNN46_RS18610 () | 3886788..3887330 | + | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| JNN46_RS18615 () | 3887421..3887993 | + | 573 | WP_042856856.1 | Common pilus major fimbrillin subunit EcpA | VF |
| JNN46_RS18620 () | 3888050..3888718 | + | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| JNN46_RS18625 () | 3888744..3891269 | + | 2526 | WP_001131116.1 | putative outer membrane usher protein EcpC | VF |
| JNN46_RS18630 () | 3891259..3892902 | + | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| JNN46_RS18635 () | 3892871..3893581 | + | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| JNN46_RS18640 () | 3893888..3894217 | + | 330 | WP_001335188.1 | YkgJ family cysteine cluster protein | - |
| JNN46_RS18645 () | 3894229..3894392 | - | 164 | Protein_3655 | tail fiber assembly protein | - |
| JNN46_RS18650 () | 3894466..3895080 | - | 615 | WP_001019923.1 | YagU family protein | - |
| JNN46_RS18655 () | 3895295..3895480 | - | 186 | WP_000146243.1 | hypothetical protein | - |
| JNN46_RS18660 () | 3895529..3895687 | + | 159 | Protein_3658 | integrase | - |
| JNN46_RS18665 () | 3895904..3896597 | - | 694 | Protein_3659 | IS1 family transposase | - |
| JNN46_RS18670 () | 3897190..3901320 | + | 4131 | WP_001034003.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| JNN46_RS18675 () | 3901476..3901970 | + | 495 | WP_001059463.1 | Transcriptional repressor MprA | VF |
| JNN46_RS18680 () | 3902405..3902743 | - | 339 | WP_000772639.1 | Arm DNA-binding domain-containing protein | - |
| JNN46_RS18685 () | 3903109..3904428 | + | 1320 | WP_000144686.1 | Prophage integrase IntA ; Integrase | Integrase |
| JNN46_RS18690 () | 3904521..3905375 | - | 855 | WP_024174313.1 | DUF4942 domain-containing protein | - |
| JNN46_RS18695 () | 3905460..3905657 | - | 198 | WP_000839247.1 | DUF957 domain-containing protein | - |
| JNN46_RS18700 () | 3905669..3906157 | - | 489 | WP_000761726.1 | hypothetical protein | - |
| JNN46_RS18705 () | 3906154..3906531 | - | 378 | WP_000854700.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN46_RS18710 () | 3906621..3906989 | - | 369 | WP_001531802.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN46_RS18715 () | 3907152..3907373 | - | 222 | WP_000692353.1 | DUF987 domain-containing protein | - |
| JNN46_RS18720 () | 3907442..3907918 | - | 477 | WP_001186199.1 | RadC family protein | - |
| JNN46_RS18725 () | 3907934..3908419 | - | 486 | WP_000213723.1 | antirestriction protein | - |
| JNN46_RS18730 () | 3908511..3909329 | - | 819 | WP_001234709.1 | DUF945 domain-containing protein | - |
| JNN46_RS18735 () | 3909656..3912778 | - | 3123 | WP_202847140.1 | autotransporter adhesin Ag43 | - |
| JNN46_RS18740 () | 3913112..3913984 | - | 873 | WP_021538680.1 | GTPase family protein | - |
| JNN46_RS18745 () | 3914315..3914497 | + | 183 | WP_000282123.1 | hypothetical protein | - |
| JNN46_RS18750 () | 3914798..3915160 | - | 363 | WP_000229734.1 | IS66 family transposase ISEc23 | Transposase |
| JNN46_RS18755 () | 3915547..3916857 | + | 1311 | WP_000016482.1 | cadaverine/lysine antiporter | - |
| JNN46_RS18760 () | 3916888..3919014 | + | 2127 | WP_001092279.1 | lysine decarboxylase LdcC | - |
| JNN46_RS18765 () | 3919218..3919928 | + | 711 | WP_000215693.1 | helix-turn-helix domain-containing protein | - |
| JNN46_RS18770 () | 3920222..3921718 | + | 1497 | WP_001298165.1 | lysine--tRNA ligase | - |
| JNN46_RS18775 () | 3921765..3922652 | + | 888 | WP_001178453.1 | HTH-type transcriptional regulator ArgP | - |
| JNN46_RS18780 () | 3923439..3923801 | + | 363 | WP_000239761.1 | IS66 family transposase IS682 | Transposase |
| JNN46_RS18785 () | 3923798..3924145 | + | 348 | WP_000624593.1 | IS66 family transposase ISCro1 | Transposase |
| JNN46_RS18790 () | 3924165..3924764 | + | 600 | Protein_3684 | IS66 family transposase IS679 | Transposase |
| JNN46_RS18795 () | 3924833..3925615 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| JNN46_RS18800 () | 3925612..3926184 | - | 573 | Protein_3686 | IS21 family transposase IS100kyp | Transposase |
| JNN46_RS18805 () | 3926171..3926313 | - | 143 | Protein_3687 | IS110 family transposase | - |
| JNN46_RS18810 () | 3926374..3926559 | + | 186 | Protein_3688 | IS66 family transposase IS682 | Transposase |
| JNN46_RS18815 () | 3926666..3927865 | - | 1200 | WP_001298139.1 | GTP-binding protein | - |
| JNN46_RS18820 () | 3928129..3928920 | - | 792 | WP_000977398.1 | DUF4198 domain-containing protein | - |
| JNN46_RS18825 () | 3928939..3930909 | - | 1971 | WP_001445605.1 | Hemin receptor | VF |
| JNN46_RS18830 () | 3931255..3932618 | + | 1364 | Protein_3692 | IS4 family transposase ISEc13 | Transposase |
| JNN46_RS18840 () | 3934508..3934891 | + | 384 | Protein_3693 | IS4 family transposase IS4 | Transposase |
| JNN46_RS18845 () | 3934902..3935201 | - | 300 | WP_000805229.1 | hypothetical protein | - |
| JNN46_RS18850 () | 3935739..3936854 | + | 1116 | WP_001298145.1 | salmochelin biosynthesis C-glycosyltransferase IroB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|