MGE detailed information
MGE type: Genomic_island MGE length: 8550 bp
Accession: NZ_CP068796 Location: 4462849..4471398 Organism: Escherichia coli strain RIVM_C012087 Replicon: chromosome
Accession: NZ_CP068796 Location: 4462849..4471398 Organism: Escherichia coli strain RIVM_C012087 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN38_RS21470 () | 4459380..4460105 | - | 726 | WP_000066559.1 | type 1 fimbria chaperone FimC | - |
| JNN38_RS21475 () | 4460142..4460681 | - | 540 | WP_000824099.1 | type 1 fimbrial protein | - |
| JNN38_RS21480 () | 4460746..4461294 | - | 549 | WP_106106609.1 | type 1 fimbrial major subunit FimA | - |
| JNN38_RS21485 () | 4461775..4462371 | - | 597 | WP_000044708.1 | type 1 fimbria switch DNA invertase FimE | - |
| JNN38_RS21490 () | 4462849..4463451 | - | 603 | WP_001564306.1 | Tyrosine recombinase XerC | VF |
| JNN38_RS21495 () | 4464915..4465631 | + | 717 | WP_001519309.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN38_RS21500 () | 4465651..4466757 | + | 1107 | WP_001519308.1 | N-acetylneuraminate epimerase | - |
| JNN38_RS21505 () | 4466822..4467802 | + | 981 | WP_001519307.1 | transposase | - |
| JNN38_RS21510 () | 4468385..4469626 | - | 1242 | Protein_4214 | helicase YjhR | - |
| JNN38_RS21515 () | 4469689..4469988 | + | 300 | WP_001519304.1 | GNAT family N-acetyltransferase | - |
| JNN38_RS21520 () | 4470365..4470622 | + | 258 | WP_001550554.1 | hypothetical protein | Toxin Detail |
| JNN38_RS21525 () | 4470634..4471185 | + | 552 | WP_001519303.1 | N-acetyltransferase | Antitoxin Detail |
| JNN38_RS21530 () | 4471237..4471398 | + | 162 | WP_001519302.1 | hypothetical protein | - |
| JNN38_RS21535 () | 4471435..4471983 | + | 549 | WP_001519301.1 | hypothetical protein | - |
| JNN38_RS21540 () | 4472110..4472370 | + | 261 | WP_000084876.1 | hypothetical protein | - |
| JNN38_RS21545 () | 4472408..4472524 | + | 117 | Protein_4221 | VOC family protein | - |
| JNN38_RS21550 () | 4472769..4473890 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| JNN38_RS21555 () | 4473887..4474165 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| JNN38_RS21560 () | 4474177..4475490 | + | 1314 | WP_001519300.1 | galactitol-specific PTS transporter subunit IIC | - |
| JNN38_RS21565 () | 4475503..4476309 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|