MGE detailed information
MGE type: Genomic_island MGE length: 10759 bp
Accession: NZ_CP068796 Location: 4056193..4066951 Organism: Escherichia coli strain RIVM_C012087 Replicon: chromosome
Accession: NZ_CP068796 Location: 4056193..4066951 Organism: Escherichia coli strain RIVM_C012087 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN38_RS19530 () | 4051539..4052321 | - | 783 | WP_001550661.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| JNN38_RS19535 () | 4052637..4055846 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| JNN38_RS19540 () | 4056007..4056147 | + | 141 | WP_001308408.1 | ash family protein | - |
| JNN38_RS19545 () | 4056193..4056663 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| JNN38_RS19550 () | 4056660..4056762 | + | 103 | Protein_3833 | helix-turn-helix domain-containing protein | - |
| JNN38_RS19555 () | 4056854..4057012 | + | 159 | Protein_3834 | integrase | - |
| JNN38_RS19565 () | 4057217..4058470 | - | 1254 | WP_001550659.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JNN38_RS19570 () | 4058482..4059585 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JNN38_RS19575 () | 4059873..4060928 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JNN38_RS19580 () | 4060967..4061368 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| JNN38_RS19585 () | 4061426..4062670 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 4062086..4062166 | - | 81 | NuclAT_10 | - | - |
| - () | 4062086..4062166 | - | 81 | NuclAT_10 | - | - |
| - () | 4062086..4062166 | - | 81 | NuclAT_10 | - | - |
| - () | 4062086..4062166 | - | 81 | NuclAT_10 | - | - |
| JNN38_RS19590 () | 4062762..4063220 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JNN38_RS19595 () | 4063481..4064938 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JNN38_RS19600 () | 4064995..4065347 | - | 353 | Protein_3842 | peptide chain release factor H | - |
| JNN38_RS19605 () | 4065343..4065549 | - | 207 | Protein_3843 | RtcB family protein | - |
| JNN38_RS19610 () | 4065795..4066247 | - | 453 | WP_019842500.1 | GNAT family N-acetyltransferase | - |
| JNN38_RS19615 () | 4066257..4066655 | - | 399 | WP_001263491.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JNN38_RS19620 () | 4066658..4066951 | - | 294 | WP_000554755.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JNN38_RS19625 () | 4067003..4068058 | - | 1056 | WP_001550655.1 | DNA polymerase IV | - |
| JNN38_RS19630 () | 4068129..4068914 | - | 786 | WP_019842510.1 | putative lateral flagellar export/assembly protein LafU | - |
| JNN38_RS19635 () | 4068886..4070598 | + | 1713 | Protein_3849 | flagellar biosynthesis protein FlhA | - |
| JNN38_RS19640 () | 4070703..4070981 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| JNN38_RS19645 () | 4070974..4071330 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|