MGE detailed information
MGE type: Prophage MGE length: 35517 bp
Accession: NZ_CP068795 Location: 4208399..4243915 Organism: Escherichia coli strain RIVM_C011532 Replicon: chromosome
Accession: NZ_CP068795 Location: 4208399..4243915 Organism: Escherichia coli strain RIVM_C011532 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JNN54_RS20320 () | 4205968..4206693 | - | 726 | WP_061353285.1 | type 1 fimbria chaperone FimC | - |
| JNN54_RS20325 () | 4206730..4207269 | - | 540 | WP_000824114.1 | type 1 fimbrial protein | - |
| JNN54_RS20330 () | 4207334..4207888 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| JNN54_RS20335 () | 4208399..4209096 | - | 698 | Protein_3980 | IS1 family transposase IS1A | Transposase |
| JNN54_RS20340 () | 4209147..4209743 | - | 597 | WP_072649983.1 | Tyrosine recombinase XerC | VF |
| JNN54_RS20345 () | 4210220..4210822 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| JNN54_RS20350 () | 4212276..4212992 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| JNN54_RS20355 () | 4213012..4214118 | + | 1107 | WP_001353974.1 | N-acetylneuraminate epimerase | - |
| JNN54_RS20360 () | 4214183..4215163 | + | 981 | WP_001295601.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| JNN54_RS20365 () | 4215171..4215821 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| JNN54_RS20370 () | 4216866..4217012 | - | 147 | WP_001290178.1 | hypothetical protein | - |
| JNN54_RS20375 () | 4217097..4217294 | - | 198 | WP_001327226.1 | DUF957 domain-containing protein | - |
| JNN54_RS20380 () | 4217314..4217802 | - | 489 | WP_000761685.1 | hypothetical protein | - |
| JNN54_RS20385 () | 4217799..4218176 | - | 378 | WP_001094443.1 | TA system toxin CbtA family protein | Toxin Detail |
| JNN54_RS20390 () | 4218266..4218634 | - | 369 | WP_001285607.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JNN54_RS20395 () | 4218714..4218935 | - | 222 | WP_000692350.1 | DUF987 domain-containing protein | - |
| JNN54_RS20400 () | 4219022..4219498 | - | 477 | WP_001186165.1 | RadC family protein | - |
| JNN54_RS20405 () | 4219513..4219998 | - | 486 | WP_000206664.1 | antirestriction protein | - |
| JNN54_RS20410 () | 4220090..4220908 | - | 819 | WP_001175163.1 | DUF945 domain-containing protein | - |
| JNN54_RS20415 () | 4220998..4221231 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| JNN54_RS20420 () | 4221237..4221914 | - | 678 | WP_001519094.1 | hypothetical protein | - |
| JNN54_RS20425 () | 4222062..4222742 | - | 681 | WP_203134127.1 | WYL domain-containing protein | - |
| JNN54_RS20430 () | 4222945..4223829 | - | 885 | WP_000010383.1 | 50S ribosome-binding GTPase | - |
| JNN54_RS20435 () | 4223935..4224897 | + | 963 | WP_000126799.1 | hypothetical protein | - |
| JNN54_RS20440 () | 4224894..4225748 | - | 855 | WP_000110727.1 | hypothetical protein | - |
| JNN54_RS20445 () | 4227368..4227898 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| JNN54_RS20450 () | 4228568..4229299 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| JNN54_RS20455 () | 4229361..4229894 | - | 534 | WP_077890856.1 | phage terminase large subunit family protein | - |
| JNN54_RS20460 () | 4229812..4230294 | - | 483 | WP_001327202.1 | hypothetical protein | - |
| JNN54_RS20465 () | 4230498..4231001 | + | 504 | WP_001072164.1 | SLATT domain-containing protein | - |
| JNN54_RS20470 () | 4231004..4231780 | + | 777 | WP_000218942.1 | nucleotidyltransferase domain-containing protein | - |
| JNN54_RS20475 () | 4232059..4232406 | - | 348 | WP_001617303.1 | hypothetical protein | - |
| JNN54_RS20480 () | 4233057..4233860 | + | 804 | WP_075851344.1 | chaperonin | - |
| JNN54_RS20485 () | 4234046..4234597 | + | 552 | WP_072650102.1 | hypothetical protein | - |
| JNN54_RS20490 () | 4234846..4235295 | + | 450 | WP_001609859.1 | hypothetical protein | - |
| JNN54_RS20495 () | 4235333..4236154 | + | 822 | WP_000900255.1 | hypothetical protein | - |
| JNN54_RS20500 () | 4236225..4237016 | + | 792 | WP_000902464.1 | hypothetical protein | - |
| JNN54_RS20510 () | 4238775..4239375 | + | 601 | Protein_4015 | IS481 family transposase ISKpn28 | Transposase |
| JNN54_RS20515 () | 4241068..4241634 | + | 567 | WP_001126811.1 | inovirus-type Gp2 protein | - |
| JNN54_RS20520 () | 4241881..4242456 | + | 576 | WP_000991584.1 | hypothetical protein | - |
| JNN54_RS20525 () | 4242525..4242761 | + | 237 | WP_000958149.1 | AlpA family transcriptional regulator | - |
| JNN54_RS20530 () | 4242758..4242916 | + | 159 | WP_000831911.1 | hypothetical protein | - |
| JNN54_RS20535 () | 4243004..4243552 | + | 549 | WP_001167422.1 | hypothetical protein | - |
| JNN54_RS20540 () | 4243571..4243915 | - | 345 | WP_072649904.1 | ProQ/FinO family protein | - |
| JNN54_RS20545 () | 4243912..4244085 | - | 174 | WP_000258195.1 | hypothetical protein | - |
| JNN54_RS20550 () | 4244548..4245633 | + | 1086 | WP_000179014.1 | DNA sulfur modification protein DndB | - |
| JNN54_RS20555 () | 4245630..4247264 | + | 1635 | WP_000041168.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|