MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 197494 bp
Accession: NZ_CP068708 Location: 702726..900219 Organism: Streptococcus suis strain ID33329 Replicon: chromosome
Accession: NZ_CP068708 Location: 702726..900219 Organism: Streptococcus suis strain ID33329 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JM964_RS03435 () | 698008..698682 | + | 675 | WP_044668165.1 | DnaD domain-containing protein | - |
JM964_RS03440 () | 698684..699367 | + | 684 | WP_024386905.1 | tRNA (adenine(22)-N(1))-methyltransferase TrmK | - |
JM964_RS03445 () | 699357..700151 | + | 795 | WP_024395271.1 | Nif3-like dinuclear metal center hexameric protein | - |
JM964_RS03450 () | 700326..701150 | + | 825 | WP_024401482.1 | ZIP family metal transporter | - |
JM964_RS03455 () | 701248..702117 | + | 870 | WP_015646663.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
JM964_RS03460 () | 702117..702710 | + | 594 | WP_044677077.1 | dTDP-4-dehydrorhamnose 3,5-epimerase family protein | - |
JM964_RS03465 () | 702710..703195 | + | 486 | WP_044683475.1 | phosphoribosylanthranilate isomerase | - |
JM964_RS03470 () | 703384..704430 | + | 1047 | WP_002939751.1 | dTDP-glucose 4,6-dehydratase | VF |
JM964_RS03475 () | 704485..705336 | + | 852 | WP_024384784.1 | dTDP-4-dehydrorhamnose reductase | - |
JM964_RS03480 () | 705353..706396 | + | 1044 | WP_024384783.1 | hypothetical protein | - |
JM964_RS03485 () | 706434..709541 | + | 3108 | WP_202847653.1 | GBS Bsp-like repeat-containing protein | - |
JM964_RS03490 () | 709661..710047 | + | 387 | WP_029171592.1 | Exo-glucosaminidase LytG | VF |
JM964_RS03495 () | 710106..712655 | - | 2550 | WP_202847654.1 | LTA synthase family protein | - |
JM964_RS03500 () | 712868..714016 | + | 1149 | WP_202847655.1 | DUF1972 domain-containing protein | - |
JM964_RS03505 () | 714013..714942 | + | 930 | WP_044676638.1 | UDP-Glc:alpha-D-GlcNAc-diphosphoundecaprenol beta-1,3-glucosyltransferase WfgD | VF |
JM964_RS03510 () | 714945..715751 | + | 807 | WP_024384359.1 | ABC transporter permease | - |
JM964_RS03515 () | 715751..716965 | + | 1215 | WP_024384360.1 | Teichoic acids export ATP-binding protein TagH | VF |
JM964_RS03520 () | 716986..718710 | + | 1725 | WP_014637737.1 | rhamnan synthesis protein F | - |
JM964_RS03525 () | 718743..720002 | + | 1260 | WP_014637738.1 | lipopolysaccharide biosynthesis protein | - |
JM964_RS03530 () | 719999..721306 | + | 1308 | WP_074411035.1 | DUF2142 domain-containing protein | - |
JM964_RS03535 () | 721329..722318 | + | 990 | WP_202847656.1 | glycosyltransferase family 8 protein | - |
JM964_RS03540 () | 722321..723301 | + | 981 | WP_029752602.1 | putative glycosyltransferase EpsJ | VF |
JM964_RS03545 () | 723311..725371 | + | 2061 | WP_024412379.1 | glycosyltransferase | - |
JM964_RS03550 () | 725371..726624 | + | 1254 | WP_024412378.1 | glycosyltransferase family 4 protein | - |
JM964_RS03555 () | 726728..727444 | + | 717 | WP_136581372.1 | Polyprenol monophosphomannose synthase | VF |
JM964_RS03560 () | 727444..727800 | + | 357 | WP_002937073.1 | DUF2304 domain-containing protein | - |
JM964_RS03565 () | 727790..728560 | + | 771 | WP_024384368.1 | hypothetical protein | VF |
JM964_RS03570 () | 728743..729231 | + | 489 | WP_014637746.1 | EbsA family protein | - |
JM964_RS03575 () | 729220..729414 | - | 195 | WP_024385576.1 | ferredoxin | - |
JM964_RS03580 () | 729465..729947 | + | 483 | WP_015646683.1 | LysM peptidoglycan-binding domain-containing protein | - |
JM964_RS03585 () | 729957..730634 | + | 678 | WP_044681988.1 | (d)CMP kinase | - |
JM964_RS03590 () | 730815..731336 | + | 522 | WP_032497583.1 | translation initiation factor IF-3 | - |
JM964_RS03595 () | 731363..731563 | + | 201 | WP_012027223.1 | 50S ribosomal protein L35 | - |
JM964_RS03600 () | 731603..731962 | + | 360 | WP_012028296.1 | 50S ribosomal protein L20 | - |
JM964_RS03605 () | 732193..734694 | + | 2502 | WP_202847657.1 | pneumococcal-type histidine triad protein | - |
JM964_RS03610 () | 734991..737171 | - | 2181 | WP_202847658.1 | LTA synthase family protein | - |
JM964_RS03615 () | 737287..738450 | + | 1164 | WP_202847659.1 | class I SAM-dependent rRNA methyltransferase | - |
JM964_RS03620 () | 738447..739121 | + | 675 | WP_024378346.1 | type I 3-dehydroquinate dehydratase | - |
JM964_RS03625 () | 739124..740290 | + | 1167 | WP_202847660.1 | chorismate synthase | - |
JM964_RS03630 () | 740298..741401 | + | 1104 | WP_202847661.1 | prephenate dehydrogenase | - |
JM964_RS03635 () | 741411..741749 | + | 339 | WP_002938966.1 | YlbF/YmcA family competence regulator | - |
JM964_RS03640 () | 742171..743334 | - | 1164 | WP_202847450.1 | IS30 family transposase ISSeq6 | Transposase |
JM964_RS03645 () | 743563..744708 | + | 1146 | WP_024395469.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
JM964_RS03650 () | 744732..745733 | + | 1002 | WP_044668193.1 | tagatose-bisphosphate aldolase | - |
JM964_RS03655 () | 746438..747397 | + | 960 | WP_024400040.1 | hypothetical protein | VF |
JM964_RS03660 () | 747421..748395 | + | 975 | WP_044684205.1 | hypothetical protein | VF |
JM964_RS03665 () | 748451..749344 | + | 894 | WP_074391888.1 | ABC transporter permease | - |
JM964_RS03670 () | 749354..750154 | + | 801 | WP_002940641.1 | ABC transporter ATP-binding protein | - |
JM964_RS03675 () | 750352..751419 | - | 1068 | WP_024395869.1 | 3-dehydroquinate synthase | - |
JM964_RS03680 () | 751432..752301 | - | 870 | WP_024395870.1 | shikimate dehydrogenase | - |
JM964_RS03685 () | 752347..753372 | - | 1026 | WP_012027207.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
JM964_RS03690 () | 753382..754419 | - | 1038 | WP_202847662.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
JM964_RS03695 () | 754684..755964 | + | 1281 | WP_172047414.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
JM964_RS03700 () | 755973..756464 | + | 492 | WP_024393608.1 | shikimate kinase | - |
JM964_RS03705 () | 756455..757282 | + | 828 | WP_002941297.1 | prephenate dehydratase | - |
JM964_RS03710 () | 757294..758616 | + | 1323 | WP_002935127.1 | LCP family protein | - |
JM964_RS03715 () | 758683..760044 | + | 1362 | WP_044673442.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
JM964_RS03720 () | 760255..760422 | + | 168 | WP_014636271.1 | hypothetical protein | - |
JM964_RS03725 () | 760425..761243 | + | 819 | WP_014636272.1 | replication initiator protein A | - |
JM964_RS03730 () | 761392..762747 | + | 1356 | WP_014636274.1 | DNA (cytosine-5-)-methyltransferase | - |
JM964_RS03735 () | 762731..763159 | + | 429 | WP_014636275.1 | hypothetical protein | - |
JM964_RS03740 () | 763170..763553 | + | 384 | WP_014636276.1 | hypothetical protein | - |
JM964_RS03745 () | 763562..763795 | + | 234 | WP_014636277.1 | hypothetical protein | - |
JM964_RS03750 () | 763798..764382 | + | 585 | WP_014636278.1 | CPBP family intramembrane metalloprotease | - |
JM964_RS03755 () | 764459..764947 | + | 489 | WP_202847663.1 | hypothetical protein | - |
JM964_RS03760 () | 764947..766764 | + | 1818 | WP_014636280.1 | type IV secretory system conjugative DNA transfer family protein | - |
JM964_RS03765 () | 766782..767024 | + | 243 | WP_001072182.1 | hypothetical protein | - |
JM964_RS03770 () | 767043..767897 | + | 855 | WP_014636281.1 | conjugal transfer protein TrbL | - |
JM964_RS03775 () | 767959..768312 | + | 354 | WP_014636282.1 | PrgI family protein | - |
JM964_RS03780 () | 768269..770620 | + | 2352 | WP_014636283.1 | ATPase AAA | - |
JM964_RS03785 () | 770622..773423 | + | 2802 | WP_015445150.1 | CHAP domain-containing protein | - |
JM964_RS03790 () | 773560..774552 | + | 993 | WP_202847664.1 | Abi family protein | - |
JM964_RS03795 () | 774799..775962 | - | 1164 | WP_202847450.1 | IS30 family transposase ISSeq6 | Transposase |
JM964_RS03800 () | 776235..776519 | + | 285 | Protein_714 | CHAP domain-containing protein | - |
JM964_RS03805 () | 776605..777450 | - | 846 | WP_044770475.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
JM964_RS03810 () | 777447..778037 | - | 591 | WP_000037243.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
JM964_RS03815 () | 778210..783106 | + | 4897 | Protein_717 | Agglutinin receptor | VF |
JM964_RS03820 () | 783107..783298 | + | 192 | WP_202847665.1 | thrombospondin type 3 repeat-containing protein | - |
JM964_RS03825 () | 783282..783833 | + | 552 | WP_172067809.1 | hypothetical protein | - |
JM964_RS03830 () | 783882..784337 | + | 456 | Protein_720 | hypothetical protein | - |
JM964_RS03835 () | 784376..785432 | + | 1057 | Protein_721 | IS630 family transposase | - |
JM964_RS03840 () | 785436..788831 | + | 3396 | Protein_722 | N-6 DNA methylase | - |
JM964_RS03845 () | 788829..789146 | + | 318 | Protein_723 | molybdopterin-guanine dinucleotide biosynthesis protein MobA | - |
JM964_RS03850 () | 789418..790581 | - | 1164 | WP_202847450.1 | IS30 family transposase ISSeq6 | Transposase |
JM964_RS03855 () | 790806..790889 | + | 84 | WP_099868591.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
JM964_RS03860 () | 791014..791751 | + | 738 | WP_001038796.1 | rRNA adenine N-6-methyltransferase | ARG |
JM964_RS03865 () | 791897..792205 | + | 309 | WP_202847720.1 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
JM964_RS03870 () | 792214..793470 | - | 1257 | WP_202847666.1 | ISL3 family transposase ISSsu6 | Transposase |
JM964_RS03875 () | 793646..794020 | + | 375 | WP_001140406.1 | TnpV protein | - |
JM964_RS03880 () | 794387..796306 | + | 1920 | WP_202847667.1 | Tetracycline resistance protein TetO | VF |
JM964_RS03885 () | 796358..796531 | + | 174 | WP_002779755.1 | cysteine-rich KTR domain-containing protein | - |
JM964_RS03890 () | 797019..797531 | + | 513 | WP_202847668.1 | sigma-70 family RNA polymerase sigma factor | - |
JM964_RS03895 () | 797626..798051 | + | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
JM964_RS03900 () | 798135..798608 | + | 474 | WP_000331637.1 | sigma-70 family RNA polymerase sigma factor | - |
JM964_RS03905 () | 798762..799793 | + | 1032 | Protein_735 | AAA family ATPase | - |
JM964_RS03910 () | 800312..801277 | + | 966 | WP_001145977.1 | plasmid recombination protein | - |
JM964_RS03915 () | 801285..802139 | + | 855 | WP_000743701.1 | ParB/RepB/Spo0J family partition protein | - |
JM964_RS03920 () | 802216..802446 | + | 231 | WP_000659121.1 | hypothetical protein | - |
JM964_RS03925 () | 802517..802708 | + | 192 | WP_000503424.1 | hypothetical protein | - |
JM964_RS03930 () | 802762..804645 | + | 1884 | WP_043028856.1 | IS607 family transposase ISTsi1 | Transposase |
JM964_RS03935 () | 804612..805571 | + | 960 | Protein_741 | hypothetical protein | - |
JM964_RS03940 () | 805642..805941 | + | 300 | WP_014636295.1 | hypothetical protein | - |
JM964_RS03945 () | 805955..806245 | + | 291 | WP_000893083.1 | hypothetical protein | - |
JM964_RS03950 () | 806340..806978 | + | 639 | WP_014636296.1 | hypothetical protein | - |
JM964_RS03955 () | 807018..808118 | + | 1101 | WP_014636297.1 | toprim domain-containing protein | - |
JM964_RS03960 () | 808146..808373 | + | 228 | WP_000110922.1 | hypothetical protein | - |
JM964_RS03965 () | 808370..808759 | + | 390 | WP_044475264.1 | hypothetical protein | - |
JM964_RS03970 () | 808809..809099 | + | 291 | WP_000667951.1 | hypothetical protein | - |
JM964_RS03975 () | 809169..809645 | + | 477 | WP_000578719.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
JM964_RS03980 () | 809645..810412 | + | 768 | WP_001235242.1 | zeta toxin family protein | Toxin Detail |
JM964_RS03985 () | 810449..812956 | + | 2508 | WP_001213955.1 | AAA family ATPase | - |
JM964_RS03990 () | 813294..813656 | + | 363 | WP_202847669.1 | hypothetical protein | - |
JM964_RS03995 () | 813659..814024 | + | 366 | WP_000431640.1 | plasmid mobilization relaxosome protein MobC | - |
JM964_RS04000 () | 814011..815894 | + | 1884 | WP_014636299.1 | relaxase/mobilization nuclease domain-containing protein | - |
JM964_RS04005 () | 815991..816206 | + | 216 | WP_014636300.1 | hypothetical protein | - |
JM964_RS04010 () | 816288..817364 | + | 1077 | WP_014636301.1 | S8 family serine peptidase | - |
JM964_RS04015 () | 817405..818103 | + | 699 | WP_000276750.1 | Sensory transduction protein regX3 | VF |
JM964_RS04020 () | 818081..819424 | + | 1344 | WP_000977993.1 | HAMP domain-containing histidine kinase | - |
JM964_RS04025 () | 819614..820315 | + | 702 | WP_000452012.1 | putative ABC transporter ATP-binding protein YxlF | VF |
JM964_RS04030 () | 820308..821045 | + | 738 | WP_000181737.1 | lantibiotic ABC transporter permease | - |
JM964_RS04035 () | 821023..821709 | + | 687 | WP_001033677.1 | hypothetical protein | - |
JM964_RS04040 () | 822057..822224 | + | 168 | WP_001058290.1 | gallidermin/nisin family lantibiotic | - |
JM964_RS04045 () | 822465..825440 | + | 2976 | WP_014636302.1 | lantibiotic dehydratase | - |
JM964_RS04050 () | 825421..827229 | + | 1809 | WP_202847670.1 | ABC transporter ATP-binding protein/permease | - |
JM964_RS04055 () | 827222..828499 | + | 1278 | WP_000344171.1 | lanthionine synthetase C family protein | - |
JM964_RS04060 () | 828501..829217 | + | 717 | WP_001226539.1 | NisI/SpaI family lantibiotic immunity lipoprotein | - |
JM964_RS04065 () | 829485..829889 | + | 405 | WP_000878635.1 | sigma-70 family RNA polymerase sigma factor | - |
JM964_RS04070 () | 830394..832148 | + | 1755 | WP_044673435.1 | hypothetical protein ; Integrase | Integrase |
JM964_RS04075 () | 832646..833071 | + | 426 | WP_024400879.1 | GNAT family N-acetyltransferase | - |
JM964_RS04080 () | 833085..833540 | + | 456 | WP_029749749.1 | GNAT family N-acetyltransferase | - |
JM964_RS04085 () | 833778..835496 | - | 1719 | WP_024389902.1 | Phosphoglucomutase | VF |
JM964_RS04090 () | 835587..836156 | - | 570 | WP_015646942.1 | ECF transporter S component | - |
JM964_RS04095 () | 836143..836691 | - | 549 | WP_044673431.1 | phosphopantothenoylcysteine decarboxylase | - |
JM964_RS04100 () | 836684..837379 | - | 696 | WP_024382938.1 | phosphopantothenate--cysteine ligase | - |
JM964_RS04105 () | 837882..839552 | + | 1671 | WP_172091854.1 | formate--tetrahydrofolate ligase | - |
JM964_RS04110 () | 839592..840401 | - | 810 | WP_024389906.1 | PrsW family intramembrane metalloprotease | - |
JM964_RS04115 () | 840618..841934 | + | 1317 | WP_172091856.1 | FAD-containing oxidoreductase | - |
JM964_RS04120 () | 842204..843046 | - | 843 | WP_024416463.1 | PrsW family intramembrane metalloprotease | - |
JM964_RS04125 () | 843203..843820 | + | 618 | WP_024395172.1 | DUF5052 family protein | - |
JM964_RS04130 () | 843821..844329 | + | 509 | Protein_780 | N-acetyltransferase | - |
JM964_RS04135 () | 844319..844972 | + | 654 | WP_044681950.1 | DNA alkylation repair protein | - |
JM964_RS04140 () | 844981..845268 | + | 288 | WP_044673419.1 | DUF1905 domain-containing protein | - |
JM964_RS04145 () | 845803..846579 | - | 777 | WP_024384400.1 | glycyl-radical enzyme activating protein | - |
JM964_RS04150 () | 846711..847454 | + | 744 | WP_202847671.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
JM964_RS04155 () | 847467..848438 | + | 972 | WP_044673416.1 | sugar-binding transcriptional regulator | - |
JM964_RS04160 () | 848629..848952 | + | 324 | WP_024376531.1 | PTS lactose/cellobiose transporter subunit IIA | - |
JM964_RS04165 () | 848985..849290 | + | 306 | WP_002935430.1 | PTS sugar transporter subunit IIB | - |
JM964_RS04170 () | 849303..850604 | + | 1302 | WP_024414650.1 | PTS sugar transporter subunit IIC | - |
JM964_RS04175 () | 850756..853200 | + | 2445 | WP_024407593.1 | glycyl radical protein | - |
JM964_RS04180 () | 853215..853883 | + | 669 | WP_014638067.1 | fructose-6-phosphate aldolase | - |
JM964_RS04185 () | 853915..854871 | + | 957 | WP_202847672.1 | glycerol dehydrogenase | - |
JM964_RS04190 () | 854992..856086 | + | 1095 | WP_044673410.1 | glycerol dehydrogenase | - |
JM964_RS04195 () | 856255..857331 | + | 1077 | WP_029171167.1 | aspartate-semialdehyde dehydrogenase | - |
JM964_RS04200 () | 857404..858339 | + | 936 | WP_024384407.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
JM964_RS04205 () | 858640..859992 | + | 1353 | WP_044673406.1 | NAD(P)/FAD-dependent oxidoreductase | - |
JM964_RS04210 () | 859982..861445 | + | 1464 | WP_044673405.1 | helix-turn-helix domain-containing protein | - |
JM964_RS04215 () | 861675..863189 | + | 1515 | WP_014638061.1 | glycerol kinase GlpK | - |
JM964_RS04220 () | 863265..865094 | + | 1830 | WP_202847673.1 | type 1 glycerol-3-phosphate oxidase | - |
JM964_RS04225 () | 865108..865815 | + | 708 | WP_044673402.1 | aquaporin family protein | - |
JM964_RS04230 () | 865947..866897 | + | 951 | WP_044673401.1 | VOC family protein | - |
JM964_RS04235 () | 866910..867512 | + | 603 | WP_044673399.1 | hypothetical protein | - |
JM964_RS04240 () | 867541..869331 | - | 1791 | WP_172091862.1 | oligoendopeptidase F | - |
JM964_RS04245 () | 869498..869836 | + | 339 | WP_002935455.1 | hypothetical protein | - |
JM964_RS04250 () | 870022..871389 | + | 1368 | WP_014638055.1 | FAD-dependent oxidoreductase | - |
JM964_RS04255 () | 871575..873854 | + | 2280 | WP_044679625.1 | DNA helicase PcrA | - |
JM964_RS04260 () | 874297..875046 | + | 750 | WP_202847674.1 | translation initiation factor 2 | - |
JM964_RS04265 () | 875379..876062 | + | 684 | WP_202847675.1 | YjjG family noncanonical pyrimidine nucleotidase | - |
JM964_RS04270 () | 876141..876905 | + | 765 | WP_044751739.1 | CPBP family intramembrane metalloprotease | - |
JM964_RS04275 () | 877397..878453 | - | 1057 | Protein_809 | IS630 family transposase | - |
JM964_RS04280 () | 878974..879729 | + | 756 | WP_044681910.1 | M15 family metallopeptidase | - |
JM964_RS04285 () | 879818..880261 | + | 444 | WP_002935466.1 | VOC family protein | - |
JM964_RS04290 () | 880284..881894 | - | 1611 | WP_024384422.1 | hypothetical protein | - |
JM964_RS04295 () | 881891..882634 | - | 744 | WP_029186612.1 | ABC transporter ATP-binding protein NatA | VF |
JM964_RS04300 () | 883142..884926 | + | 1785 | WP_202847676.1 | excinuclease ABC subunit UvrC | - |
JM964_RS04305 () | 884983..885111 | + | 129 | WP_002935474.1 | DUF4044 domain-containing protein | - |
JM964_RS04310 () | 885315..886628 | + | 1314 | WP_032498978.1 | GTPase ObgE | - |
JM964_RS04315 () | 887179..887343 | + | 165 | WP_002943677.1 | hypothetical protein | - |
JM964_RS04320 () | 887667..892829 | + | 5163 | WP_202847677.1 | MucBP domain-containing protein | - |
JM964_RS04325 () | 892957..896223 | + | 3267 | WP_202847678.1 | ATP-dependent nuclease subunit B | - |
JM964_RS04330 () | 896223..899873 | + | 3651 | WP_202847679.1 | helicase-exonuclease AddAB subunit AddA | - |
JM964_RS04335 () | 900034..900678 | - | 645 | WP_024400462.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
JM964_RS04340 () | 900821..902770 | + | 1950 | WP_105156913.1 | DNA topoisomerase IV subunit B | - |
JM964_RS04345 () | 902794..903396 | + | 603 | WP_202847680.1 | Fic family protein | - |
JM964_RS04350 () | 903429..903932 | + | 504 | WP_202847681.1 | DUF1232 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
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