MGE detailed information
MGE type: Prophage MGE length: 33389 bp
Accession: NZ_CP068706 Location: 2127375..2160763 Organism: Escherichia coli strain J53-p1-pV-hybrid-1 Replicon: chromosome
Accession: NZ_CP068706 Location: 2127375..2160763 Organism: Escherichia coli strain J53-p1-pV-hybrid-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JK375_RS10245 () | 2124373..2126799 | - | 2427 | WP_000041675.1 | dimethyl sulfoxide reductase subunit A | - |
| JK375_RS10250 () | 2126998..2127303 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JK375_RS10255 () | 2127411..2128121 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JK375_RS10260 () | 2128124..2128684 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JK375_RS10265 () | 2128719..2129060 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JK375_RS10270 () | 2129195..2129521 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JK375_RS10275 () | 2129727..2130941 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JK375_RS10280 () | 2130953..2131972 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JK375_RS10285 () | 2132030..2132140 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| JK375_RS10290 () | 2132160..2133317 | - | 1158 | Protein_2010 | hypothetical protein ; Integrase | Integrase |
| JK375_RS10295 () | 2133331..2134026 | - | 696 | Protein_2011 | IS3 family transposase IS2 | Transposase |
| JK375_RS10300 () | 2134023..2134790 | - | 768 | Protein_2012 | exonuclease | - |
| JK375_RS10305 () | 2134883..2135074 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JK375_RS10310 () | 2135071..2135259 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JK375_RS10315 () | 2135827..2136045 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| JK375_RS10320 () | 2136205..2136360 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| JK375_RS10325 () | 2136527..2136934 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| JK375_RS10330 () | 2137018..2137248 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| JK375_RS10335 () | 2137232..2137510 | + | 279 | Protein_2019 | hypothetical protein | - |
| JK375_RS10340 () | 2137545..2137694 | + | 150 | WP_011443592.1 | hypothetical protein | - |
| JK375_RS10345 () | 2138131..2138463 | - | 333 | WP_001301033.1 | protein FlxA | - |
| JK375_RS10350 () | 2138666..2138971 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| JK375_RS10355 () | 2138996..2139235 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JK375_RS10360 () | 2139235..2139522 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JK375_RS10365 () | 2139594..2139749 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JK375_RS10370 () | 2139966..2140217 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| JK375_RS10375 () | 2140284..2140562 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| JK375_RS10380 () | 2140564..2141613 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| JK375_RS10385 () | 2141627..2142379 | + | 753 | WP_001047135.1 | antitermination protein | - |
| JK375_RS10390 () | 2142657..2142746 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| JK375_RS10395 () | 2142801..2143013 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JK375_RS10400 () | 2143314..2143529 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JK375_RS10405 () | 2144283..2144498 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JK375_RS10410 () | 2144503..2144814 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| JK375_RS10415 () | 2144811..2145344 | + | 534 | WP_001092971.1 | lysozyme | - |
| JK375_RS10420 () | 2145341..2145838 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JK375_RS10425 () | 2146201..2146413 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JK375_RS10430 () | 2146424..2146612 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JK375_RS10435 () | 2146615..2146680 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| JK375_RS10440 () | 2146759..2146914 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| JK375_RS10445 () | 2147086..2147259 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JK375_RS10450 () | 2147411..2147821 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JK375_RS10455 () | 2147879..2148112 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JK375_RS10460 () | 2148501..2149070 | + | 570 | WP_064673984.1 | DNA-packaging protein | - |
| JK375_RS10465 () | 2149021..2149983 | + | 963 | WP_001027733.1 | phage tail protein | - |
| JK375_RS10470 () | 2149983..2150558 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| JK375_RS10475 () | 2150656..2151246 | - | 591 | WP_000086527.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JK375_RS10480 () | 2151563..2151796 | - | 234 | WP_000836770.1 | cold shock protein YdfK | - |
| JK375_RS10485 () | 2151865..2151978 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| JK375_RS10490 () | 2152499..2153866 | + | 1368 | Protein_2050 | MHS family MFS transporter | - |
| JK375_RS10495 () | 2153955..2155415 | + | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| JK375_RS10500 () | 2155450..2155653 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JK375_RS10505 () | 2155830..2156516 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| JK375_RS10510 () | 2156605..2157351 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| JK375_RS10515 () | 2157488..2159533 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| JK375_RS10520 () | 2159577..2160095 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| JK375_RS10525 () | 2160371..2160763 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| JK375_RS10530 () | 2161018..2161908 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| JK375_RS10535 () | 2162127..2162222 | - | 96 | WP_000901367.1 | protein MgtS | - |
| JK375_RS10540 () | 2162349..2163536 | - | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| JK375_RS10545 () | 2163731..2164630 | + | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| JK375_RS10550 () | 2164661..2164879 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| JK375_RS10555 () | 2164911..2165294 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| JK375_RS10560 () | 2165314..2165748 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|