MGE detailed information
MGE type: Mobilizable plasmid MGE length: 82394 bp
Accession: NZ_CP068681 Location: 1..82394 Organism: Escherichia coli strain NCCP12480 Replicon: plasmid unnamed
Accession: NZ_CP068681 Location: 1..82394 Organism: Escherichia coli strain NCCP12480 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKV47_RS21915 () | 75..332 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| JKV47_RS21920 () | 349..600 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| JKV47_RS21925 () | 591..638 | + | 48 | WP_229471593.1 | hypothetical protein | - |
| JKV47_RS21930 () | 631..1113 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| JKV47_RS21935 () | 1106..1963 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| JKV47_RS21940 () | 2899..3243 | + | 345 | WP_001553768.1 | hypothetical protein | - |
| JKV47_RS21945 () | 3424..4539 | - | 1116 | Protein_6 | IS91 family transposase IS91 | Transposase |
| JKV47_RS21950 () | 4539..4904 | - | 366 | WP_000124098.1 | hypothetical protein | - |
| JKV47_RS21955 () | 5026..6177 | - | 1152 | WP_001442799.1 | IS30 family transposase IS30D | Transposase |
| JKV47_RS21960 () | 6245..6502 | - | 258 | Protein_9 | IS3 family transposase IS911 | Transposase |
| JKV47_RS21970 () | 6781..6972 | - | 192 | Protein_10 | IS91 family transposase | - |
| JKV47_RS21975 () | 7143..7676 | + | 534 | Protein_11 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| JKV47_RS21980 () | 7604..7897 | - | 294 | WP_235144939.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| JKV47_RS21985 () | 7899..8303 | - | 405 | WP_001389361.1 | hypothetical protein | - |
| JKV47_RS21990 () | 8275..8718 | - | 444 | WP_001323891.1 | dehydrogenase | - |
| JKV47_RS21995 () | 8837..9073 | + | 237 | WP_001323890.1 | colicin V immunity protein | - |
| JKV47_RS22000 () | 9051..9362 | + | 312 | WP_001259758.1 | colicin V | - |
| JKV47_RS22005 () | 9532..11628 | - | 2097 | WP_000184924.1 | microcin H47 export transporter peptidase/ATP-binding subunit MchF | - |
| JKV47_RS22010 () | 11621..12895 | - | 1275 | WP_000489609.1 | HlyD family secretion protein | - |
| JKV47_RS22015 () | 13506..13774 | + | 269 | Protein_19 | type II toxin-antitoxin system antitoxin YacA | - |
| JKV47_RS22020 () | 13774..13899 | + | 126 | Protein_20 | type II toxin-antitoxin system toxin YacB | - |
| JKV47_RS22025 () | 14067..14360 | + | 294 | WP_000269327.1 | DUF6404 family protein | - |
| JKV47_RS22030 () | 14438..14739 | - | 302 | Protein_22 | hypothetical protein | - |
| JKV47_RS22035 () | 14920..15954 | + | 1035 | WP_001190234.1 | 3-deoxy-7-phosphoheptulonate synthase | - |
| JKV47_RS22040 () | 16820..18997 | + | 2178 | WP_001222186.1 | Ferric enterobactin receptor | VF |
| JKV47_RS22045 () | 19042..19998 | - | 957 | WP_000271274.1 | Ferri-bacillibactin esterase BesA | VF |
| JKV47_RS22050 () | 20083..21312 | - | 1230 | WP_000933678.1 | Enterochelin esterase | VF |
| JKV47_RS22055 () | 21416..25075 | - | 3660 | WP_001389363.1 | Multidrug efflux ATP-binding/permease protein | VF |
| JKV47_RS22060 () | 25215..26330 | - | 1116 | WP_001318220.1 | Elloramycin glycosyltransferase ElmGT | VF |
| JKV47_RS22065 () | 27641..28665 | - | 1025 | Protein_29 | integrase core domain-containing protein | - |
| JKV47_RS22425 () | 29180..29344 | + | 165 | Protein_30 | lysis protein | - |
| JKV47_RS22080 () | 29301..29417 | + | 117 | WP_230294008.1 | lysis system o-spanin lipoprotein Rz1 | - |
| JKV47_RS22090 () | 29475..29768 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| JKV47_RS22095 () | 30393..30913 | + | 521 | Protein_33 | IS3 family transposase IS2 | Transposase |
| JKV47_RS22105 () | 32188..32616 | + | 429 | Protein_35 | IS3 family transposase ISEc17 | Transposase |
| JKV47_RS22110 () | 32918..33112 | - | 195 | Protein_36 | IS200/IS605-like element IS200C family transposase | - |
| JKV47_RS22115 () | 33586..34956 | - | 1371 | WP_001312828.1 | efflux transporter outer membrane subunit | - |
| JKV47_RS22120 () | 34960..36900 | - | 1941 | WP_000733250.1 | Macrolide export ATP-binding/permease protein MacB | VF |
| JKV47_RS22125 () | 36897..38084 | - | 1188 | WP_000928804.1 | efflux RND transporter periplasmic adaptor subunit | - |
| JKV47_RS22130 () | 38679..39019 | - | 341 | Protein_40 | IS3 family transposase | - |
| JKV47_RS22135 () | 39065..39390 | + | 326 | Protein_41 | integrase core domain-containing protein | - |
| JKV47_RS22140 () | 39538..40737 | - | 1200 | Protein_42 | IS3 family transposase IS629 | Transposase |
| JKV47_RS22145 () | 40876..41055 | + | 180 | Protein_43 | transposase | - |
| JKV47_RS22150 () | 42352..43305 | + | 954 | WP_000280980.1 | Protease 7 | VF |
| JKV47_RS22155 () | 43738..44847 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| JKV47_RS22160 () | 44916..45818 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| JKV47_RS22165 () | 46192..46380 | + | 189 | WP_001324033.1 | hypothetical protein | - |
| JKV47_RS22170 () | 46501..47241 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| JKV47_RS22175 () | 47526..48503 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| JKV47_RS22180 () | 49249..49572 | + | 324 | Protein_50 | IS21 family transposase IS21 | Transposase |
| JKV47_RS22185 () | 49574..49678 | + | 105 | Protein_51 | AAA family ATPase | - |
| JKV47_RS22190 () | 49739..50252 | + | 514 | Protein_52 | DUF4113 domain-containing protein | - |
| JKV47_RS22200 () | 51485..52399 | + | 915 | WP_000949004.1 | Putative metal ABC transporter substrate-binding protein Hpf | VF |
| JKV47_RS22205 () | 52399..53226 | + | 828 | WP_000983710.1 | Iron(3+)-hydroxamate import ATP-binding protein FhuC | VF |
| JKV47_RS22210 () | 53223..54080 | + | 858 | WP_001101723.1 | Manganese transport system membrane protein MntB | ARG |
| JKV47_RS22215 () | 54077..54934 | + | 858 | WP_000968139.1 | Manganese transport system membrane protein MntB | ARG |
| JKV47_RS22220 () | 55168..55425 | - | 258 | Protein_58 | transposase | - |
| JKV47_RS22225 () | 55423..55836 | + | 414 | Protein_59 | phosphopyruvate hydratase | - |
| JKV47_RS22230 () | 56177..56557 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| JKV47_RS22235 () | 56937..58130 | - | 1194 | WP_000095526.1 | MFS transporter | - |
| JKV47_RS22240 () | 58266..59990 | + | 1725 | WP_000602863.1 | N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase | VF |
| JKV47_RS22245 () | 59991..60938 | + | 948 | WP_000011910.1 | N(6)-hydroxylysine O-acetyltransferase | VF |
| JKV47_RS22250 () | 60938..62680 | + | 1743 | WP_001015721.1 | Aerobactin synthase | VF |
| JKV47_RS22255 () | 62677..64010 | + | 1334 | Protein_65 | L-lysine N6-monooxygenase | VF |
| JKV47_RS22260 () | 64036..66237 | + | 2202 | WP_000973520.1 | Ferric aerobactin receptor | VF |
| JKV47_RS22265 () | 66722..67419 | + | 698 | WP_223155668.1 | IS1-like element IS1A family transposase | - |
| JKV47_RS22270 () | 67719..68885 | + | 1167 | WP_115194726.1 | Sporulation initiation inhibitor protein Soj | VF |
| JKV47_RS22275 () | 68885..69856 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JKV47_RS22280 () | 70493..70662 | + | 170 | Protein_70 | hypothetical protein | - |
| JKV47_RS22285 () | 70845..70925 | - | 81 | Protein_71 | hypothetical protein | - |
| JKV47_RS22290 () | 70995..71201 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| JKV47_RS22295 () | 71227..71766 | + | 540 | WP_000290840.1 | single-stranded DNA-binding protein | - |
| JKV47_RS22300 () | 71834..72067 | + | 234 | WP_000005990.1 | DUF905 family protein | - |
| JKV47_RS22305 () | 72095..72292 | + | 198 | Protein_75 | hypothetical protein | - |
| JKV47_RS22310 () | 72347..72781 | + | 435 | WP_000845936.1 | conjugation system SOS inhibitor PsiB | - |
| JKV47_RS22315 () | 72778..73540 | + | 763 | Protein_77 | plasmid SOS inhibition protein A | - |
| - () | 73509..73611 | + | 103 | NuclAT_1 | - | - |
| - () | 73509..73611 | + | 103 | NuclAT_1 | - | - |
| - () | 73509..73611 | + | 103 | NuclAT_1 | - | - |
| - () | 73509..73611 | + | 103 | NuclAT_1 | - | - |
| JKV47_RS22320 () | 73657..75026 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| - () | 75053..75179 | + | 127 | NuclAT_0 | - | - |
| - () | 75053..75179 | + | 127 | NuclAT_0 | - | - |
| - () | 75053..75179 | + | 127 | NuclAT_0 | - | - |
| - () | 75053..75179 | + | 127 | NuclAT_0 | - | - |
| - | 75112..75177 | - | 66 | - | - | Antitoxin Detail |
| JKV47_RS22325 () | 75165..75314 | + | 150 | Protein_79 | plasmid maintenance protein Mok | - |
| JKV47_RS22330 () | 75265..75381 | + | 117 | WP_001323520.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| JKV47_RS22335 () | 75601..75831 | + | 231 | WP_071586998.1 | hypothetical protein | - |
| JKV47_RS22340 () | 75829..76001 | - | 173 | Protein_82 | hypothetical protein | - |
| JKV47_RS22345 () | 76071..76277 | + | 207 | WP_000547968.1 | hypothetical protein | - |
| JKV47_RS22350 () | 76302..76589 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| JKV47_RS22355 () | 76707..77528 | + | 822 | WP_001234426.1 | DUF932 domain-containing protein | - |
| JKV47_RS22360 () | 77825..78427 | - | 603 | WP_000243712.1 | hypothetical protein | VF |
| JKV47_RS22365 () | 78748..79131 | + | 384 | WP_001151524.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JKV47_RS22370 () | 79318..80007 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| JKV47_RS22375 () | 80100..80501 | + | 402 | WP_001369361.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| JKV47_RS22380 () | 80534..80598 | + | 65 | Protein_90 | conjugal transfer protein TraA | - |
| JKV47_RS22385 () | 80654..81007 | + | 354 | Protein_91 | fertility inhibition protein FinO | - |
| JKV47_RS22390 () | 81143..81355 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| JKV47_RS22395 () | 81601..81675 | + | 75 | Protein_93 | endonuclease | - |
| - () | 81931..81992 | - | 62 | NuclAT_2 | - | - |
| - () | 81931..81992 | - | 62 | NuclAT_2 | - | - |
| - () | 81931..81992 | - | 62 | NuclAT_2 | - | - |
| - () | 81931..81992 | - | 62 | NuclAT_2 | - | - |
| JKV47_RS22400 () | 82036..82185 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|