MGE detailed information
MGE type: Mobilizable plasmid MGE length: 82214 bp
Accession: NZ_CP068594 Location: 1..82214 Organism: Escherichia coli strain EF7-18-58 Replicon: plasmid pEF7-17-58_3
Accession: NZ_CP068594 Location: 1..82214 Organism: Escherichia coli strain EF7-18-58 Replicon: plasmid pEF7-17-58_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMY44_RS23565 () | 49..720 | + | 672 | WP_072078459.1 | type-F conjugative transfer system secretin TraK | - |
| JMY44_RS23570 () | 720..2147 | + | 1428 | WP_000146657.1 | conjugal transfer protein TraB | - |
| JMY44_RS23575 () | 2137..2727 | + | 591 | WP_000002784.1 | conjugal transfer protein TraP | - |
| JMY44_RS23580 () | 2666..3031 | + | 366 | WP_051049367.1 | conjugal transfer protein TrbD | - |
| JMY44_RS23585 () | 3031..3546 | + | 516 | WP_050195259.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JMY44_RS23590 () | 3681..3902 | + | 222 | WP_000064029.1 | conjugal transfer protein TraR | - |
| JMY44_RS23595 () | 4062..4532 | + | 471 | Protein_7 | TraC family protein | - |
| JMY44_RS23600 () | 4532..7783 | + | 3252 | Protein_8 | Multifunctional conjugation protein TraI | Relaxase |
| JMY44_RS23605 () | 7803..8549 | + | 747 | WP_072672439.1 | conjugal transfer pilus acetylase TraX | - |
| JMY44_RS23610 () | 8604..9164 | + | 561 | WP_000139345.1 | fertility inhibition protein FinO | - |
| JMY44_RS23615 () | 9256..9953 | + | 698 | Protein_11 | IS1-like element IS1A family transposase | - |
| JMY44_RS23620 () | 9946..10089 | + | 144 | WP_072078460.1 | hypothetical protein | - |
| JMY44_RS23625 () | 10128..10718 | + | 591 | WP_000766814.1 | DUF2726 domain-containing protein | - |
| JMY44_RS23630 () | 10958..11212 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
| JMY44_RS23635 () | 11450..11524 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JMY44_RS23640 () | 11517..12374 | + | 858 | WP_000130643.1 | incFII family plasmid replication initiator RepA | - |
| JMY44_RS23645 () | 13312..13965 | + | 654 | WP_000616800.1 | CPBP family intramembrane metalloprotease | - |
| JMY44_RS23650 () | 14058..14315 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| JMY44_RS23655 () | 14248..14649 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| JMY44_RS23660 () | 14934..16706 | + | 1773 | WP_001262766.1 | DUF262 domain-containing protein | - |
| JMY44_RS23665 () | 17002..17706 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMY44_RS23670 () | 17850..18491 | - | 642 | WP_001011939.1 | Chloramphenicol acetyltransferase 2 | ARG |
| JMY44_RS23675 () | 18587..19291 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| JMY44_RS23680 () | 19480..20355 | + | 876 | WP_015387340.1 | Beta-lactamase CTX-M-1 | ARG |
| JMY44_RS23685 () | 20402..20734 | - | 333 | WP_001393253.1 | WbuC family cupin fold metalloprotein | - |
| JMY44_RS23690 () | 20748..21689 | + | 942 | Protein_26 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JMY44_RS23695 () | 21752..22456 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMY44_RS23700 () | 22509..22778 | - | 270 | Protein_28 | DUF1281 domain-containing protein | - |
| JMY44_RS23705 () | 23196..23444 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| JMY44_RS23710 () | 23441..23878 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JMY44_RS23715 () | 23878..25149 | + | 1272 | WP_000457496.1 | Y-family DNA polymerase | - |
| JMY44_RS23720 () | 25154..25546 | - | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| JMY44_RS23725 () | 25551..26522 | - | 972 | WP_001103697.1 | hypothetical protein | - |
| JMY44_RS23730 () | 26751..27395 | + | 645 | WP_000633913.1 | AAA family ATPase | - |
| JMY44_RS23735 () | 27389..27664 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| JMY44_RS23740 () | 27856..28282 | - | 427 | Protein_36 | tyrosine-type recombinase/integrase | - |
| JMY44_RS23745 () | 28462..29052 | + | 591 | Protein_37 | colicin-B | - |
| JMY44_RS23750 () | 29068..29764 | - | 697 | Protein_38 | IS1 family transposase IS1G | Transposase |
| JMY44_RS23755 () | 30106..31395 | + | 1290 | WP_000824245.1 | MFS transporter | - |
| JMY44_RS23760 () | 31367..32392 | + | 1026 | WP_000864945.1 | zinc-binding alcohol dehydrogenase family protein | - |
| JMY44_RS23765 () | 32451..33122 | - | 672 | WP_046788564.1 | FadR family transcriptional regulator | - |
| JMY44_RS23770 () | 33217..34620 | - | 1404 | WP_050010088.1 | GGDEF domain-containing protein | - |
| JMY44_RS23775 () | 34742..35374 | - | 633 | WP_000433505.1 | LysE family transporter | - |
| JMY44_RS23780 () | 35569..36266 | + | 698 | Protein_44 | IS1 family transposase | - |
| JMY44_RS23785 () | 36409..36873 | + | 465 | WP_001352013.1 | helix-turn-helix domain-containing protein | - |
| JMY44_RS23790 () | 37049..37921 | + | 873 | WP_000794337.1 | hypothetical protein | - |
| JMY44_RS23795 () | 38079..38776 | - | 698 | Protein_47 | IS1 family transposase | - |
| JMY44_RS23800 () | 38833..39402 | + | 570 | Protein_48 | lipid II-degrading bacteriocin colicin M | - |
| JMY44_RS23805 () | 39452..39805 | - | 354 | WP_000864813.1 | colicin M immunity protein | - |
| JMY44_RS23810 () | 39977..40786 | - | 810 | WP_000016963.1 | site-specific integrase | - |
| JMY44_RS23815 () | 40787..41092 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JMY44_RS23820 () | 41094..41312 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JMY44_RS23825 () | 41871..42797 | + | 927 | WP_001290414.1 | hypothetical protein | - |
| JMY44_RS23830 () | 42847..43101 | + | 255 | WP_000678528.1 | hypothetical protein | - |
| JMY44_RS23835 () | 43599..43943 | + | 345 | WP_000792769.1 | hypothetical protein | - |
| JMY44_RS23840 () | 44117..44410 | - | 294 | Protein_56 | hypothetical protein | - |
| JMY44_RS23845 () | 44464..45168 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMY44_RS23850 () | 45230..45946 | - | 717 | Protein_58 | DUF4238 domain-containing protein | - |
| JMY44_RS23855 () | 46519..46809 | - | 291 | WP_000648897.1 | hypothetical protein | - |
| JMY44_RS23860 () | 46809..47933 | - | 1125 | WP_000386705.1 | DUF4238 domain-containing protein | - |
| JMY44_RS23865 () | 47968..49560 | - | 1593 | WP_001350003.1 | hypothetical protein | - |
| JMY44_RS23870 () | 49782..50540 | - | 759 | WP_000494510.1 | hypothetical protein | - |
| JMY44_RS23875 () | 50552..51043 | - | 492 | WP_000528930.1 | hypothetical protein | - |
| JMY44_RS23880 () | 51317..51556 | + | 240 | WP_000371884.1 | hypothetical protein | - |
| JMY44_RS23885 () | 51746..53818 | - | 2073 | WP_001084041.1 | DUF87 domain-containing protein | - |
| JMY44_RS23890 () | 53815..55206 | - | 1392 | WP_000085084.1 | SIR2 family protein | - |
| JMY44_RS23895 () | 55283..55768 | - | 486 | Protein_67 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JMY44_RS23900 () | 55832..56536 | + | 705 | WP_001067845.1 | IS6 family transposase IS26 | Transposase |
| JMY44_RS23905 () | 56587..56811 | - | 225 | Protein_69 | hypothetical protein | - |
| JMY44_RS23910 () | 56940..57275 | + | 336 | Protein_70 | colicin transporter | - |
| JMY44_RS23915 () | 57297..57656 | - | 360 | WP_085452786.1 | colicin | - |
| JMY44_RS23920 () | 57730..58427 | + | 698 | Protein_72 | IS1 family transposase | - |
| JMY44_RS23925 () | 58477..58752 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JMY44_RS23930 () | 58752..59035 | - | 284 | Protein_74 | ribbon-helix-helix protein, CopG family | - |
| JMY44_RS23935 () | 59435..59648 | - | 214 | Protein_75 | Tn3 family transposase | - |
| JMY44_RS23940 () | 59924..60514 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| JMY44_RS23945 () | 60651..61222 | + | 572 | Protein_77 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| JMY44_RS23950 () | 61259..62650 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| JMY44_RS23955 () | 62683..63111 | + | 429 | Protein_79 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| JMY44_RS23960 () | 63430..64086 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| JMY44_RS23965 () | 64480..65494 | + | 1015 | Protein_81 | IS3 family transposase ISEc36 | Transposase |
| JMY44_RS23970 () | 65537..66763 | - | 1227 | Protein_82 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JMY44_RS23975 () | 66758..67768 | - | 1011 | Protein_83 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JMY44_RS23980 () | 67819..68046 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| JMY44_RS23985 () | 68070..68261 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| JMY44_RS23990 () | 68743..69285 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| JMY44_RS23995 () | 69298..70158 | - | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| JMY44_RS24000 () | 70301..70987 | + | 687 | Protein_88 | IS4 family transposase IS10R | Transposase |
| JMY44_RS24005 () | 71041..71745 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMY44_RS24010 () | 71808..72449 | + | 642 | Protein_90 | DUF1281 domain-containing protein | - |
| JMY44_RS24015 () | 72453..72758 | + | 306 | WP_032155763.1 | hypothetical protein | - |
| JMY44_RS24020 () | 72834..73517 | + | 684 | WP_000086160.1 | DNA methylase | - |
| JMY44_RS24025 () | 73518..73739 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| JMY44_RS24030 () | 73751..74185 | + | 435 | WP_021547622.1 | DUF1380 family protein | - |
| JMY44_RS24035 () | 74230..75000 | + | 771 | WP_001006225.1 | hypothetical protein | - |
| JMY44_RS24040 () | 75537..75839 | + | 303 | WP_072126845.1 | antirestriction protein | - |
| JMY44_RS24045 () | 75886..76308 | + | 423 | WP_001546488.1 | DUF1380 family protein | - |
| JMY44_RS24050 () | 76305..76496 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| JMY44_RS24055 () | 76702..76989 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| JMY44_RS24060 () | 77110..77931 | + | 822 | WP_074148718.1 | DUF945 domain-containing protein | - |
| JMY44_RS24065 () | 78228..78830 | - | 603 | WP_000243709.1 | hypothetical protein | VF |
| JMY44_RS24070 () | 79151..79534 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| JMY44_RS24075 () | 79721..80410 | + | 690 | WP_000283380.1 | conjugal transfer transcriptional regulator TraJ | - |
| JMY44_RS24080 () | 80520..80915 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| JMY44_RS24085 () | 80948..81307 | + | 360 | WP_000994781.1 | type IV conjugative transfer system pilin TraA | - |
| JMY44_RS24090 () | 81322..81633 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|