MGE detailed information
MGE type: Prophage MGE length: 23137 bp
Accession: NZ_CP068561 Location: 3643655..3666791 Organism: Clostridioides difficile strain CD9301 Replicon: chromosome
Accession: NZ_CP068561 Location: 3643655..3666791 Organism: Clostridioides difficile strain CD9301 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW49_RS16425 () | 3639358..3639786 | + | 429 | WP_003424207.1 | flavodoxin | - |
| JMW49_RS16430 () | 3639939..3640733 | - | 795 | WP_009905672.1 | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | - |
| JMW49_RS16435 () | 3640882..3641250 | + | 369 | WP_003424204.1 | MerR family transcriptional regulator | - |
| JMW49_RS16440 () | 3641565..3641927 | + | 363 | WP_009905671.1 | metal-dependent transcriptional regulator | - |
| JMW49_RS16445 () | 3641939..3643594 | + | 1656 | WP_003424202.1 | PocR ligand-binding domain-containing protein | - |
| JMW49_RS16450 () | 3643655..3644407 | + | 753 | WP_003424201.1 | TSUP family transporter | - |
| JMW49_RS16455 () | 3644923..3644982 | - | 60 | WP_071585685.1 | hypothetical protein | - |
| JMW49_RS16460 () | 3645376..3645669 | + | 294 | WP_009889969.1 | autorepressor SdpR family transcription factor | - |
| JMW49_RS16465 () | 3645650..3646291 | + | 642 | WP_003424198.1 | SdpI family protein | - |
| JMW49_RS16470 () | 3646551..3646882 | + | 332 | Protein_3164 | carboxymuconolactone decarboxylase family protein | - |
| JMW49_RS16475 () | 3647414..3647578 | + | 165 | WP_003424195.1 | hypothetical protein | - |
| JMW49_RS16480 () | 3647802..3648647 | - | 846 | WP_003424194.1 | DUF4878 domain-containing protein | - |
| JMW49_RS16485 () | 3649192..3649737 | - | 546 | WP_077699404.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JMW49_RS16490 () | 3650565..3650717 | + | 153 | WP_003424190.1 | hypothetical protein | Toxin Detail |
| - () | 3650661..3650761 | - | 101 | NuclAT_0 | - | Antitoxin Detail |
| JMW49_RS16495 () | 3654641..3654829 | - | 189 | WP_003424185.1 | helix-turn-helix transcriptional regulator | - |
| JMW49_RS16500 () | 3655017..3655250 | + | 234 | WP_003424184.1 | hypothetical protein | - |
| JMW49_RS16505 () | 3655237..3655494 | + | 258 | WP_003424182.1 | hypothetical protein | - |
| JMW49_RS16510 () | 3655487..3655867 | + | 381 | WP_003424180.1 | hypothetical protein | - |
| JMW49_RS16515 () | 3656404..3656598 | + | 195 | WP_003424168.1 | hypothetical protein | - |
| JMW49_RS16520 () | 3657584..3658156 | + | 573 | WP_003424166.1 | hypothetical protein | - |
| JMW49_RS16525 () | 3658599..3658970 | + | 372 | WP_003424165.1 | hypothetical protein | - |
| JMW49_RS16530 () | 3659109..3659366 | + | 258 | WP_003424164.1 | hypothetical protein | - |
| JMW49_RS16535 () | 3659689..3659973 | + | 285 | WP_003424163.1 | hypothetical protein | - |
| JMW49_RS16540 () | 3660250..3660486 | - | 237 | WP_003424162.1 | hypothetical protein | - |
| JMW49_RS16545 () | 3660823..3661050 | + | 228 | WP_003424160.1 | helix-turn-helix domain-containing protein | - |
| JMW49_RS16550 () | 3661037..3661375 | + | 339 | WP_003424159.1 | hypothetical protein | - |
| JMW49_RS16555 () | 3661901..3662386 | + | 486 | WP_009905654.1 | SH3 domain-containing protein | - |
| JMW49_RS16560 () | 3662724..3663131 | + | 408 | WP_029158138.1 | hypothetical protein | - |
| JMW49_RS16565 () | 3663975..3664526 | + | 552 | WP_003424155.1 | tryptophan transporter | - |
| JMW49_RS16570 () | 3665355..3666791 | + | 1437 | WP_009905653.1 | hypothetical protein | VF |
| JMW49_RS16575 () | 3667042..3668478 | + | 1437 | WP_003424153.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| JMW49_RS16580 () | 3668886..3669224 | - | 339 | WP_009905652.1 | DUF3784 domain-containing protein | - |
| JMW49_RS16585 () | 3669529..3670140 | - | 612 | WP_003424150.1 | CoA pyrophosphatase | - |
| JMW49_RS16590 () | 3670365..3671285 | - | 921 | WP_003424149.1 | PhzF family isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|