MGE detailed information
MGE type: Prophage MGE length: 10175 bp
Accession: NZ_CP068559 Location: 1507894..1518068 Organism: Clostridioides difficile strain CD9701 Replicon: chromosome
Accession: NZ_CP068559 Location: 1507894..1518068 Organism: Clostridioides difficile strain CD9701 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW50_RS06865 () | 1504129..1504536 | - | 408 | WP_029158138.1 | hypothetical protein | - |
| JMW50_RS06870 () | 1504874..1505359 | - | 486 | WP_009905654.1 | SH3 domain-containing protein | - |
| JMW50_RS06875 () | 1505885..1506223 | - | 339 | WP_003424159.1 | hypothetical protein | - |
| JMW50_RS06880 () | 1506210..1506437 | - | 228 | WP_003424160.1 | helix-turn-helix domain-containing protein | - |
| JMW50_RS06885 () | 1506774..1507010 | + | 237 | WP_003424162.1 | hypothetical protein | - |
| JMW50_RS06890 () | 1507287..1507571 | - | 285 | WP_003424163.1 | hypothetical protein | - |
| JMW50_RS06895 () | 1507894..1508151 | - | 258 | WP_003424164.1 | hypothetical protein | - |
| JMW50_RS06900 () | 1508290..1508661 | - | 372 | WP_003424165.1 | hypothetical protein | - |
| JMW50_RS06905 () | 1509104..1509676 | - | 573 | WP_003424166.1 | hypothetical protein | - |
| JMW50_RS06910 () | 1510662..1510856 | - | 195 | WP_003424168.1 | hypothetical protein | - |
| JMW50_RS06915 () | 1511393..1511773 | - | 381 | WP_003424180.1 | hypothetical protein | - |
| JMW50_RS06920 () | 1511766..1512023 | - | 258 | WP_003424182.1 | hypothetical protein | - |
| JMW50_RS06925 () | 1512010..1512243 | - | 234 | WP_003424184.1 | hypothetical protein | - |
| JMW50_RS06930 () | 1512431..1512619 | + | 189 | WP_003424185.1 | helix-turn-helix transcriptional regulator | - |
| - () | 1516499..1516599 | + | 101 | NuclAT_0 | - | Antitoxin Detail |
| JMW50_RS06935 () | 1516543..1516695 | - | 153 | WP_003424190.1 | hypothetical protein | Toxin Detail |
| JMW50_RS06940 () | 1517215..1517457 | + | 243 | WP_003424191.1 | hypothetical protein | - |
| JMW50_RS06945 () | 1517523..1518068 | + | 546 | WP_077699404.1 | Acetyltransferase YpeA ; Integrase | Integrase |
| JMW50_RS06950 () | 1518613..1519458 | + | 846 | WP_003424194.1 | DUF4878 domain-containing protein | - |
| JMW50_RS06955 () | 1519682..1519846 | - | 165 | WP_003424195.1 | hypothetical protein | - |
| JMW50_RS06960 () | 1520378..1520709 | - | 332 | Protein_1383 | carboxymuconolactone decarboxylase family protein | - |
| JMW50_RS06965 () | 1520969..1521610 | - | 642 | WP_003424198.1 | SdpI family protein | - |
| JMW50_RS06970 () | 1521591..1521884 | - | 294 | WP_009889969.1 | autorepressor SdpR family transcription factor | - |
| JMW50_RS06975 () | 1522278..1522337 | + | 60 | WP_071585685.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|