MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 77582 bp
Accession: NZ_CP068551 Location: 2595232..2672813 Organism: Pseudomonas khazarica strain ODT-83 Replicon: chromosome
Accession: NZ_CP068551 Location: 2595232..2672813 Organism: Pseudomonas khazarica strain ODT-83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLK41_RS12395 (JLK41_12395) | 2591220..2591780 | + | 561 | WP_037056661.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| JLK41_RS12415 (JLK41_12415) | 2592313..2593341 | - | 1029 | WP_210391130.1 | tyrosine-type recombinase/integrase | - |
| JLK41_RS12420 (JLK41_12420) | 2593342..2593554 | - | 213 | WP_090336332.1 | DUF4224 domain-containing protein | - |
| JLK41_RS12425 (JLK41_12425) | 2593818..2593991 | - | 174 | WP_210391131.1 | hypothetical protein | - |
| JLK41_RS12430 (JLK41_12430) | 2594024..2594311 | - | 288 | WP_096826282.1 | HigA family addiction module antitoxin | - |
| JLK41_RS12435 (JLK41_12435) | 2594329..2594607 | - | 279 | WP_019339397.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JLK41_RS12440 (JLK41_12440) | 2594703..2594936 | - | 234 | WP_096826283.1 | DUF2274 domain-containing protein | - |
| JLK41_RS12445 (JLK41_12445) | 2594933..2596195 | - | 1263 | WP_210391132.1 | TrbI/VirB10 family protein | - |
| JLK41_RS12450 (JLK41_12450) | 2596198..2597184 | - | 987 | WP_210391133.1 | P-type conjugative transfer protein TrbG | - |
| JLK41_RS12455 (JLK41_12455) | 2597181..2597888 | - | 708 | WP_210391134.1 | conjugal transfer protein TrbF | - |
| JLK41_RS12460 (JLK41_12460) | 2597901..2599061 | - | 1161 | WP_210391135.1 | P-type conjugative transfer protein TrbL | - |
| JLK41_RS12465 (JLK41_12465) | 2599058..2599243 | - | 186 | WP_210391136.1 | hypothetical protein | - |
| JLK41_RS12470 (JLK41_12470) | 2599256..2599990 | - | 735 | WP_210391137.1 | P-type conjugative transfer protein TrbJ | - |
| JLK41_RS12475 (JLK41_12475) | 2599987..2602416 | - | 2430 | WP_210391138.1 | conjugal transfer protein TrbE | - |
| JLK41_RS12480 (JLK41_12480) | 2602427..2602699 | - | 273 | WP_003116617.1 | VirB3 family type IV secretion system protein | - |
| JLK41_RS12485 (JLK41_12485) | 2602696..2603037 | - | 342 | WP_210391139.1 | TrbC/VirB2 family protein | - |
| JLK41_RS12490 (JLK41_12490) | 2603009..2603977 | - | 969 | WP_210391224.1 | P-type conjugative transfer ATPase TrbB | - |
| JLK41_RS12495 (JLK41_12495) | 2604037..2604471 | - | 435 | WP_034078679.1 | CopG family transcriptional regulator | - |
| JLK41_RS12500 (JLK41_12500) | 2604468..2606459 | - | 1992 | WP_210391140.1 | conjugal transfer protein TraG | - |
| JLK41_RS12505 (JLK41_12505) | 2606755..2607193 | - | 439 | Protein_2452 | DDE-type integrase/transposase/recombinase | - |
| JLK41_RS12510 (JLK41_12510) | 2607202..2608770 | - | 1569 | WP_210391141.1 | PAS domain-containing methyl-accepting chemotaxis protein | - |
| JLK41_RS12515 (JLK41_12515) | 2609220..2611856 | + | 2637 | WP_210391142.1 | EAL domain-containing protein | - |
| JLK41_RS12520 (JLK41_12520) | 2611958..2612578 | + | 621 | WP_210391143.1 | tyrosine-type recombinase/integrase | - |
| JLK41_RS12525 (JLK41_12525) | 2612771..2613715 | - | 945 | WP_210391144.1 | alpha/beta hydrolase | - |
| JLK41_RS12530 (JLK41_12530) | 2613824..2614465 | - | 642 | WP_210391145.1 | hypothetical protein | - |
| JLK41_RS12535 (JLK41_12535) | 2614434..2614724 | - | 291 | WP_210391146.1 | hypothetical protein | - |
| JLK41_RS12540 (JLK41_12540) | 2614859..2615557 | - | 699 | WP_210391147.1 | class I SAM-dependent methyltransferase | - |
| JLK41_RS12545 (JLK41_12545) | 2615672..2616547 | + | 876 | WP_210391148.1 | LysR family transcriptional regulator | - |
| JLK41_RS12550 (JLK41_12550) | 2616676..2617041 | - | 366 | WP_210391149.1 | nuclear transport factor 2 family protein | - |
| JLK41_RS12555 (JLK41_12555) | 2617715..2618548 | - | 834 | Protein_2462 | AAA family ATPase | - |
| JLK41_RS12560 (JLK41_12560) | 2618548..2619186 | + | 639 | WP_244976517.1 | acyl-CoA dehydrogenase family protein | - |
| JLK41_RS12565 (JLK41_12565) | 2619545..2621725 | + | 2181 | WP_210391150.1 | NosR/NirI family protein | - |
| JLK41_RS12570 (JLK41_12570) | 2621801..2623717 | + | 1917 | WP_210391151.1 | TAT-dependent nitrous-oxide reductase | - |
| JLK41_RS12575 (JLK41_12575) | 2623859..2625181 | + | 1323 | WP_047306345.1 | nitrous oxide reductase family maturation protein NosD | - |
| JLK41_RS12580 (JLK41_12580) | 2625178..2626104 | + | 927 | WP_014851515.1 | ABC transporter ATP-binding protein | - |
| JLK41_RS12585 (JLK41_12585) | 2626101..2626928 | + | 828 | WP_014851516.1 | ABC transporter permease subunit | - |
| JLK41_RS12590 (JLK41_12590) | 2626950..2627522 | + | 573 | WP_047585943.1 | nitrous oxide reductase accessory protein NosL | - |
| JLK41_RS12595 (JLK41_12595) | 2627552..2627734 | + | 183 | WP_014851518.1 | twin-arginine translocase TatA/TatE family subunit | - |
| JLK41_RS12600 (JLK41_12600) | 2628186..2629376 | + | 1191 | WP_210391152.1 | NnrS family protein | - |
| JLK41_RS12605 (JLK41_12605) | 2629486..2630229 | + | 744 | WP_047585950.1 | SDR family oxidoreductase | - |
| JLK41_RS12610 (JLK41_12610) | 2630248..2631360 | + | 1113 | WP_196250598.1 | methyl-accepting chemotaxis protein | - |
| JLK41_RS12615 (JLK41_12615) | 2631598..2632728 | + | 1131 | Protein_2474 | cbb3-type cytochrome c oxidase subunit I | - |
| JLK41_RS12620 (JLK41_12620) | 2632844..2633158 | - | 315 | WP_014851536.1 | c-type cytochrome | - |
| JLK41_RS12625 (JLK41_12625) | 2633446..2634030 | - | 585 | WP_080757027.1 | TSUP family transporter | - |
| JLK41_RS12630 (JLK41_12630) | 2634111..2635316 | + | 1206 | WP_196250622.1 | chromate efflux transporter | - |
| JLK41_RS12635 (JLK41_12635) | 2635327..2635632 | + | 306 | WP_047588115.1 | PadR family transcriptional regulator | - |
| JLK41_RS12640 (JLK41_12640) | 2635795..2637225 | + | 1431 | WP_210391153.1 | IS1182-like element ISPa7 family transposase | - |
| JLK41_RS12645 (JLK41_12645) | 2637741..2638049 | - | 309 | WP_124148941.1 | transcriptional regulator | Antitoxin Detail |
| JLK41_RS12650 (JLK41_12650) | 2638046..2638390 | - | 345 | WP_047588122.1 | toxin | Toxin Detail |
| JLK41_RS12655 (JLK41_12655) | 2638548..2639474 | - | 927 | WP_210391154.1 | LysR family transcriptional regulator | - |
| JLK41_RS12660 (JLK41_12660) | 2639488..2640687 | - | 1200 | WP_210391155.1 | MFS transporter | - |
| JLK41_RS12665 (JLK41_12665) | 2640773..2642626 | - | 1854 | WP_210391156.1 | asparagine synthase (glutamine-hydrolyzing) | - |
| JLK41_RS12670 (JLK41_12670) | 2642649..2643719 | - | 1071 | WP_092320686.1 | Gfo/Idh/MocA family oxidoreductase | - |
| JLK41_RS12675 (JLK41_12675) | 2643716..2644219 | - | 504 | WP_210391157.1 | GNAT family N-acetyltransferase | - |
| JLK41_RS12680 (JLK41_12680) | 2644221..2645453 | - | 1233 | WP_210391158.1 | 5-aminolevulinate synthase | - |
| JLK41_RS12685 (JLK41_12685) | 2645610..2646464 | + | 855 | WP_210391159.1 | helix-turn-helix transcriptional regulator | - |
| JLK41_RS12690 (JLK41_12690) | 2646482..2648431 | - | 1950 | WP_210391160.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| JLK41_RS12695 (JLK41_12695) | 2648781..2649308 | - | 528 | WP_210391161.1 | S26 family signal peptidase | - |
| JLK41_RS12700 (JLK41_12700) | 2649305..2649547 | - | 243 | WP_210391162.1 | hypothetical protein | - |
| JLK41_RS12705 (JLK41_12705) | 2649544..2650182 | - | 639 | WP_013715988.1 | ParA family partition ATPase | - |
| JLK41_RS12710 (JLK41_12710) | 2650427..2651254 | - | 828 | WP_210391163.1 | replication initiator protein A | - |
| JLK41_RS12715 (JLK41_12715) | 2651266..2651547 | - | 282 | WP_210391225.1 | helix-turn-helix domain-containing protein | - |
| JLK41_RS12720 (JLK41_12720) | 2652143..2652655 | - | 513 | WP_210391164.1 | antirestriction protein ArdA | - |
| JLK41_RS12725 (JLK41_12725) | 2652942..2653343 | - | 402 | WP_047588146.1 | putative zinc-binding protein | - |
| JLK41_RS12730 (JLK41_12730) | 2653366..2654043 | - | 678 | WP_047588149.1 | Crp/Fnr family transcriptional regulator | - |
| JLK41_RS12735 (JLK41_12735) | 2654126..2654851 | - | 726 | WP_047588151.1 | hypothetical protein | - |
| JLK41_RS12740 (JLK41_12740) | 2655172..2655807 | - | 636 | WP_047588152.1 | two-component system response regulator NarL | - |
| JLK41_RS12745 (JLK41_12745) | 2655804..2657606 | - | 1803 | WP_152488978.1 | histidine kinase | - |
| JLK41_RS12750 (JLK41_12750) | 2657838..2659100 | + | 1263 | WP_210391165.1 | nitrate/nitrite transporter | - |
| JLK41_RS12755 (JLK41_12755) | 2659115..2660530 | + | 1416 | WP_280052273.1 | NarK family nitrate/nitrite MFS transporter | - |
| JLK41_RS12760 (JLK41_12760) | 2660595..2664350 | + | 3756 | WP_210391166.1 | nitrate reductase subunit alpha | - |
| JLK41_RS12765 (JLK41_12765) | 2664362..2665900 | + | 1539 | WP_210391167.1 | nitrate reductase subunit beta | - |
| JLK41_RS12770 (JLK41_12770) | 2665903..2666658 | + | 756 | WP_210391168.1 | nitrate reductase molybdenum cofactor assembly chaperone | - |
| JLK41_RS12775 (JLK41_12775) | 2666651..2667346 | + | 696 | WP_047588166.1 | respiratory nitrate reductase subunit gamma | - |
| JLK41_RS12780 (JLK41_12780) | 2667494..2668462 | + | 969 | WP_210391169.1 | peptidylprolyl isomerase | - |
| JLK41_RS12785 (JLK41_12785) | 2668488..2669477 | + | 990 | WP_210391170.1 | GTP 3',8-cyclase MoaA | - |
| JLK41_RS12790 (JLK41_12790) | 2669555..2670940 | - | 1386 | WP_047589298.1 | oxygen-independent coproporphyrinogen III oxidase | - |
| JLK41_RS12795 (JLK41_12795) | 2671133..2673151 | + | 2019 | WP_210391171.1 | ribonucleoside triphosphate reductase | - |
| JLK41_RS25465 (JLK41_12800) | 2673184..2673333 | + | 150 | WP_021701980.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| JLK41_RS12805 (JLK41_12805) | 2673402..2674124 | + | 723 | WP_123084446.1 | anaerobic ribonucleoside-triphosphate reductase activating protein | - |
| JLK41_RS12810 (JLK41_12810) | 2674126..2675490 | - | 1365 | WP_210391172.1 | 4Fe-4S binding protein | - |
| JLK41_RS12815 (JLK41_12815) | 2675487..2676335 | - | 849 | WP_047589290.1 | FTR1 family protein | - |
| JLK41_RS12820 (JLK41_12820) | 2676345..2676665 | - | 321 | WP_210391173.1 | cupredoxin domain-containing protein | - |
| JLK41_RS12825 (JLK41_12825) | 2676699..2677232 | - | 534 | WP_047589285.1 | iron transporter | - |
| JLK41_RS12830 (JLK41_12830) | 2677405..2677605 | + | 201 | WP_047589282.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|