MGE detailed information
MGE type: Conjugative plasmid MGE length: 86412 bp
Accession: NZ_CP068388 Location: 1..86412 Organism: Salmonella enterica subsp. enterica serovar Gallinarum/Pullorum strain R51 Replicon: plasmid unnamed2
Accession: NZ_CP068388 Location: 1..86412 Organism: Salmonella enterica subsp. enterica serovar Gallinarum/Pullorum strain R51 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI728_RS23440 | 214..462 | - | 249 | WP_269724653.1 | Phospholipase D | VF |
| JI728_RS23445 | 465..593 | - | 129 | WP_269724655.1 | hypothetical protein | - |
| JI728_RS23450 (JI728_23300) | 894..1049 | - | 156 | WP_024138419.1 | hypothetical protein | - |
| JI728_RS23455 (JI728_23305) | 1052..1350 | - | 299 | Protein_4 | hypothetical protein | - |
| JI728_RS23460 (JI728_23310) | 1447..2035 | - | 589 | Protein_5 | fertility inhibition protein FinO | - |
| JI728_RS23465 (JI728_23315) | 2090..2832 | - | 743 | Protein_6 | conjugal transfer pilus acetylase TraX | - |
| JI728_RS23470 (JI728_23320) | 2839..7829 | - | 4991 | Protein_7 | Multifunctional conjugation protein TraI | Relaxase |
| JI728_RS23475 (JI728_23325) | 7829..10099 | - | 2271 | WP_269724654.1 | type IV conjugative transfer system coupling protein TraD | - |
| JI728_RS23480 (JI728_23330) | 10476..11207 | - | 732 | WP_000850404.1 | conjugal transfer complement resistance protein TraT | - |
| JI728_RS23485 (JI728_23335) | 11453..11935 | - | 483 | WP_000787664.1 | hypothetical protein | - |
| JI728_RS23490 | 13172..14443 | - | 1272 | Protein_11 | conjugal transfer protein TraH | - |
| JI728_RS23495 (JI728_23345) | 14433..14981 | - | 549 | WP_000055842.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JI728_RS23500 (JI728_23350) | 14968..15261 | - | 294 | WP_001233883.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JI728_RS23505 (JI728_23355) | 15475..16218 | - | 744 | WP_001746545.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JI728_RS23510 (JI728_23360) | 16231..16446 | - | 216 | WP_001746544.1 | conjugal transfer protein TrbE | - |
| JI728_RS23515 (JI728_23365) | 16457..16933 | - | 477 | WP_001746543.1 | hypothetical protein | - |
| JI728_RS23520 (JI728_23370) | 16944..18770 | - | 1827 | WP_001746541.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JI728_RS23525 (JI728_23375) | 18767..19186 | - | 420 | WP_001229398.1 | HNH endonuclease | - |
| JI728_RS23530 (JI728_23380) | 19223..19861 | - | 639 | WP_079786993.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JI728_RS23535 (JI728_23385) | 19846..20154 | - | 309 | WP_001576663.1 | hypothetical protein | - |
| JI728_RS23540 (JI728_23390) | 20173..21165 | - | 993 | WP_015059450.1 | conjugal transfer pilus assembly protein TraU | - |
| JI728_RS23545 (JI728_23395) | 21162..21794 | - | 633 | WP_015059451.1 | type-F conjugative transfer system protein TraW | - |
| JI728_RS23550 (JI728_23400) | 21791..22177 | - | 387 | WP_000102756.1 | type-F conjugative transfer system protein TrbI | - |
| JI728_RS23555 (JI728_23405) | 22152..24799 | - | 2648 | Protein_24 | type IV secretion system protein TraC | - |
| JI728_RS23560 (JI728_23410) | 24815..25198 | - | 384 | WP_000870325.1 | hypothetical protein | - |
| JI728_RS23565 (JI728_23415) | 25195..25662 | - | 468 | WP_000549559.1 | hypothetical protein | - |
| JI728_RS23570 (JI728_23420) | 25655..25876 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| JI728_RS23575 (JI728_23425) | 26011..26526 | - | 516 | WP_001746951.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JI728_RS23580 (JI728_23430) | 26523..26747 | - | 225 | WP_001746950.1 | DUF2689 domain-containing protein | - |
| JI728_RS23585 (JI728_23435) | 26725..27321 | - | 597 | WP_000527898.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| JI728_RS23590 (JI728_23440) | 27311..28732 | - | 1422 | WP_000146698.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| JI728_RS23595 (JI728_23445) | 28732..29472 | - | 741 | WP_015059453.1 | type-F conjugative transfer system secretin TraK | - |
| JI728_RS23600 (JI728_23450) | 29459..30025 | - | 567 | WP_000399760.1 | type IV conjugative transfer system protein TraE | - |
| JI728_RS23605 (JI728_23455) | 30047..30358 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| JI728_RS23610 (JI728_23460) | 30373..30735 | - | 363 | WP_001274202.1 | type IV conjugative transfer system pilin TraA | - |
| JI728_RS23615 (JI728_23465) | 30777..31178 | - | 402 | WP_032490308.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| JI728_RS23620 (JI728_23470) | 31271..31960 | - | 690 | WP_001746563.1 | conjugal transfer transcriptional regulator TraJ | - |
| JI728_RS23625 (JI728_23475) | 32155..32535 | - | 381 | WP_001151568.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JI728_RS23630 (JI728_23480) | 32958..33428 | + | 471 | WP_120116676.1 | hypothetical protein | VF |
| JI728_RS23635 (JI728_23485) | 33739..34557 | - | 819 | Protein_40 | DUF932 domain-containing protein | - |
| JI728_RS23640 | 34903..35031 | - | 129 | WP_001746558.1 | hypothetical protein | - |
| JI728_RS23645 (JI728_23490) | 35066..35722 | - | 657 | Protein_42 | plasmid SOS inhibition protein A | - |
| JI728_RS23650 (JI728_23495) | 35716..35850 | - | 135 | Protein_43 | conjugation system SOS inhibitor PsiB | - |
| JI728_RS23655 (JI728_23500) | 35890..37873 | - | 1984 | Protein_44 | ParB/RepB/Spo0J family partition protein | - |
| JI728_RS23660 (JI728_23505) | 37942..38082 | - | 141 | Protein_45 | DUF905 family protein | - |
| JI728_RS23665 (JI728_23510) | 38084..38398 | - | 315 | Protein_46 | single-stranded DNA-binding protein SSB2 | - |
| JI728_RS23670 (JI728_23515) | 38992..39183 | - | 192 | WP_269698857.1 | hypothetical protein | - |
| JI728_RS23675 (JI728_23520) | 39147..39470 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| JI728_RS23680 (JI728_23525) | 39706..40140 | - | 435 | WP_000274534.1 | DUF1380 family protein | - |
| JI728_RS23685 (JI728_23530) | 40207..40641 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| JI728_RS23690 (JI728_23535) | 41137..41901 | - | 765 | WP_001747302.1 | hypothetical protein | - |
| JI728_RS23695 (JI728_23540) | 41973..42386 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| JI728_RS23700 (JI728_23545) | 42442..42663 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| JI728_RS23705 (JI728_23550) | 42663..43343 | - | 681 | WP_001747300.1 | DNA methylase | - |
| JI728_RS23710 | 43506..43787 | + | 282 | WP_146671468.1 | hypothetical protein | - |
| JI728_RS23715 (JI728_23555) | 43725..44081 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| JI728_RS23720 (JI728_23560) | 44074..44544 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| JI728_RS23725 (JI728_23565) | 45055..45477 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JI728_RS23730 (JI728_23570) | 45477..46751 | + | 1275 | WP_015059462.1 | Y-family DNA polymerase | - |
| JI728_RS23735 (JI728_23575) | 46833..47807 | - | 975 | WP_162926333.1 | ParB family protein | - |
| JI728_RS23740 (JI728_23580) | 47807..49012 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| JI728_RS23745 (JI728_23585) | 49427..50368 | + | 942 | WP_000728917.1 | Recombination-promoting nuclease RpnA | VF |
| JI728_RS23750 (JI728_23590) | 50365..50966 | - | 602 | Protein_63 | DUF2913 family protein | - |
| JI728_RS23755 (JI728_23595) | 51023..51439 | - | 417 | WP_000988946.1 | hypothetical protein | - |
| JI728_RS23760 (JI728_23600) | 51542..51958 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| JI728_RS23765 (JI728_23605) | 52044..53159 | - | 1116 | WP_079786991.1 | DNA-binding protein | - |
| JI728_RS23770 (JI728_23610) | 53418..53906 | + | 489 | WP_001746759.1 | hypothetical protein | - |
| JI728_RS23775 (JI728_23615) | 54561..55301 | + | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| JI728_RS23780 (JI728_23620) | 55508..56068 | + | 561 | WP_001240331.1 | Tn3 family transposase ISPsy42 | Transposase |
| JI728_RS23785 (JI728_23625) | 56052..57716 | + | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| JI728_RS23790 (JI728_23630) | 57649..58674 | + | 1026 | WP_079786990.1 | ExeA family protein | - |
| JI728_RS23795 (JI728_23635) | 58863..59900 | - | 1038 | WP_001121399.1 | IS630 family transposase ISEc33 | Transposase |
| JI728_RS23800 (JI728_23640) | 60508..61401 | + | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| JI728_RS23805 (JI728_23645) | 61575..61739 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| JI728_RS23810 (JI728_23650) | 61913..62680 | + | 768 | WP_001541537.1 | virulence protein SpvA | - |
| JI728_RS23815 (JI728_23655) | 62643..62810 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| JI728_RS23820 (JI728_23660) | 62862..64637 | + | 1776 | WP_001746580.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| JI728_RS23825 (JI728_23665) | 64918..65643 | + | 726 | WP_001746581.1 | MAPK phosphothreonine lyase | VF |
| JI728_RS23830 (JI728_23670) | 65904..66554 | + | 651 | WP_001746582.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| JI728_RS23835 (JI728_23675) | 66681..67109 | - | 429 | WP_039563782.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JI728_RS23840 (JI728_23680) | 67166..67516 | + | 351 | WP_001746584.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| JI728_RS23845 (JI728_23685) | 67583..68128 | - | 546 | WP_223557487.1 | Invasin | VF |
| JI728_RS23850 | 68023..68481 | - | 459 | WP_014411929.1 | LysM peptidoglycan-binding domain-containing protein | - |
| JI728_RS23855 (JI728_23690) | 68863..69348 | - | 486 | WP_000905606.1 | membrane protein | - |
| JI728_RS23860 (JI728_23695) | 69342..69830 | - | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| JI728_RS23865 (JI728_23700) | 70017..70568 | - | 552 | WP_079786988.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| JI728_RS23870 (JI728_23705) | 70577..71359 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| JI728_RS23875 (JI728_23710) | 71394..71915 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| JI728_RS23880 (JI728_23715) | 71912..72202 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| JI728_RS23885 (JI728_23720) | 72204..72509 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| JI728_RS23890 (JI728_23725) | 72511..72729 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| JI728_RS23895 (JI728_23730) | 73474..73704 | + | 231 | WP_001261283.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| JI728_RS23900 (JI728_23735) | 73701..74129 | + | 429 | WP_001746752.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JI728_RS23905 (JI728_23740) | 74699..75547 | - | 849 | WP_000175397.1 | SdiA-regulated domain-containing protein | - |
| JI728_RS23910 (JI728_23745) | 75573..75734 | - | 162 | WP_001816720.1 | hypothetical protein | - |
| JI728_RS23915 (JI728_23750) | 75995..76207 | - | 213 | WP_000063791.1 | P fimbrial regulatory protein KS71A | VF |
| JI728_RS23920 (JI728_23755) | 76280..76864 | - | 585 | WP_024138406.1 | hypothetical protein | - |
| JI728_RS23925 (JI728_23760) | 76989..77702 | - | 714 | WP_000801114.1 | hypothetical protein | VF |
| JI728_RS23930 (JI728_23765) | 77964..78728 | - | 765 | WP_001746754.1 | hypothetical protein | VF |
| JI728_RS23935 (JI728_23770) | 78756..79553 | - | 798 | WP_000704722.1 | hypothetical protein | VF |
| JI728_RS23940 (JI728_23775) | 79789..80061 | - | 273 | WP_001178538.1 | hypothetical protein | - |
| JI728_RS23945 (JI728_23780) | 81520..82179 | + | 660 | WP_001575507.1 | hypothetical protein | - |
| JI728_RS23950 (JI728_23785) | 82407..83138 | + | 732 | WP_001746755.1 | hypothetical protein | - |
| JI728_RS23955 (JI728_23790) | 83305..83502 | + | 198 | WP_001675602.1 | transposase | - |
| JI728_RS23960 (JI728_23795) | 83657..83871 | + | 215 | Protein_105 | IS66 family transposase ISEc8 | Transposase |
| JI728_RS23965 (JI728_23800) | 83863..84267 | + | 405 | Protein_106 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| JI728_RS23970 (JI728_23805) | 85062..85943 | - | 882 | WP_001746973.1 | incFII family plasmid replication initiator RepA | - |
| JI728_RS23975 (JI728_23810) | 85924..86001 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|