MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP068283 Location: 3325941..3346872 Organism: Escherichia coli strain CY598 Replicon: chromosome
Accession: NZ_CP068283 Location: 3325941..3346872 Organism: Escherichia coli strain CY598 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI738_RS16340 (3321773) | 3321773..3323104 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| JI738_RS16345 (3323126) | 3323126..3324115 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| JI738_RS16350 (3324214) | 3324214..3325152 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| JI738_RS16355 (3325467) | 3325467..3325685 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| JI738_RS16360 (3325941) | 3325941..3326480 | + | 540 | WP_000675733.1 | protein YhaB | - |
| JI738_RS16365 (3326502) | 3326502..3327689 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| JI738_RS16375 (3328712) | 3328712..3329857 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| JI738_RS16380 (3329954) | 3329954..3330844 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| JI738_RS16385 (3330874) | 3330874..3331644 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| JI738_RS16390 (3331660) | 3331660..3332994 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| JI738_RS16395 (3333369) | 3333369..3334940 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| JI738_RS16400 (3335089) | 3335089..3335424 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| JI738_RS16405 (3335424) | 3335424..3335888 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| JI738_RS16410 (3335943) | 3335943..3336752 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| JI738_RS16415 (3337001) | 3337001..3338281 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| JI738_RS16420 (3338304) | 3338304..3338777 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| JI738_RS16425 (3338788) | 3338788..3339159 | + | 372 | Protein_3218 | PTS sugar transporter subunit IIC | - |
| JI738_RS16430 (3339155) | 3339155..3339712 | + | 558 | Protein_3219 | amidohydrolase family protein | - |
| JI738_RS16435 (3340063) | 3340063..3341217 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| JI738_RS16440 (3341230) | 3341230..3342090 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| JI738_RS16445 (3342257) | 3342257..3342733 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| JI738_RS16450 (3342772) | 3342772..3343575 | + | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| JI738_RS16455 (3343565) | 3343565..3344356 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| JI738_RS16460 (3344357) | 3344357..3345112 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| JI738_RS16465 (3345513) | 3345513..3346097 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| JI738_RS16470 (3346177) | 3346177..3346872 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| JI738_RS16475 (3346901) | 3346901..3349417 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| JI738_RS16480 (3349428) | 3349428..3350519 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| JI738_RS16485 (3350562) | 3350562..3351422 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|