MGE detailed information
MGE type: Genomic_island MGE length: 20932 bp
Accession: NZ_CP068279 Location: 4417097..4438028 Organism: Escherichia coli strain CY708 Replicon: chromosome
Accession: NZ_CP068279 Location: 4417097..4438028 Organism: Escherichia coli strain CY708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJW05_RS21435 (4412929) | 4412929..4414260 | - | 1332 | WP_000107723.1 | threonine/serine transporter TdcC | - |
| JJW05_RS21440 (4414282) | 4414282..4415271 | - | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| JJW05_RS21445 (4415370) | 4415370..4416308 | - | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| JJW05_RS21450 (4416623) | 4416623..4416841 | + | 219 | WP_001301311.1 | transcriptional activator TdcR | - |
| JJW05_RS21455 (4417097) | 4417097..4417636 | + | 540 | WP_000675733.1 | protein YhaB | - |
| JJW05_RS21460 (4417658) | 4417658..4418845 | + | 1188 | WP_000484600.1 | YhaC family protein | - |
| JJW05_RS21470 (4419868) | 4419868..4421013 | - | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| JJW05_RS21475 (4421110) | 4421110..4422000 | - | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| JJW05_RS21480 (4422030) | 4422030..4422800 | - | 771 | WP_001058209.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| JJW05_RS21485 (4422816) | 4422816..4424150 | - | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| JJW05_RS21490 (4424525) | 4424525..4426096 | + | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| JJW05_RS21495 (4426245) | 4426245..4426580 | + | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| JJW05_RS21500 (4426580) | 4426580..4427044 | + | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| JJW05_RS21505 (4427099) | 4427099..4427908 | - | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| JJW05_RS21510 (4428157) | 4428157..4429437 | + | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| JJW05_RS21515 (4429460) | 4429460..4429933 | + | 474 | WP_001336162.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| JJW05_RS21520 (4429944) | 4429944..4430315 | + | 372 | Protein_4205 | PTS sugar transporter subunit IIC | - |
| JJW05_RS21525 (4430311) | 4430311..4430868 | + | 558 | Protein_4206 | amidohydrolase family protein | - |
| JJW05_RS21530 (4431219) | 4431219..4432373 | + | 1155 | WP_001114869.1 | AgaS family sugar isomerase | - |
| JJW05_RS21535 (4432386) | 4432386..4433246 | + | 861 | WP_000022766.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| JJW05_RS21540 (4433413) | 4433413..4433889 | + | 477 | WP_000203711.1 | PTS galactosamine transporter subunit IIB | - |
| JJW05_RS21545 (4433928) | 4433928..4434731 | + | 804 | WP_000544489.1 | PTS galactosamine transporter subunit IIC | - |
| JJW05_RS21550 (4434721) | 4434721..4435512 | + | 792 | WP_000534347.1 | PTS galactosamine transporter subunit IID | - |
| JJW05_RS21555 (4435513) | 4435513..4436268 | + | 756 | WP_001311150.1 | galactosamine-6-phosphate isomerase | - |
| JJW05_RS21560 (4436669) | 4436669..4437253 | + | 585 | WP_001045432.1 | fimbrial protein | - |
| JJW05_RS21565 (4437333) | 4437333..4438028 | + | 696 | WP_000044775.1 | hypothetical protein | VF |
| JJW05_RS21570 (4438057) | 4438057..4440573 | + | 2517 | WP_001355538.1 | fimbria/pilus outer membrane usher protein | - |
| JJW05_RS21575 (4440584) | 4440584..4441675 | + | 1092 | WP_000816992.1 | fimbrial protein | - |
| JJW05_RS21580 (4441718) | 4441718..4442578 | - | 861 | WP_000809262.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|