MGE detailed information
MGE type: Prophage MGE length: 44403 bp
Accession: NZ_CP068279 Location: 2763048..2807450 Organism: Escherichia coli strain CY708 Replicon: chromosome
Accession: NZ_CP068279 Location: 2763048..2807450 Organism: Escherichia coli strain CY708 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJW05_RS13350 (2759151) | 2759151..2760137 | - | 987 | Protein_2608 | GGDEF domain-containing protein | - |
| JJW05_RS13355 (2760210) | 2760210..2760569 | - | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| JJW05_RS13360 (2760569) | 2760569..2761495 | - | 927 | WP_000257409.1 | glutaminase B | - |
| JJW05_RS13365 (2761559) | 2761559..2762947 | - | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| JJW05_RS13370 (2763048) | 2763048..2763929 | + | 882 | WP_000366501.1 | hypothetical protein | VF |
| JJW05_RS13375 (2764007) | 2764007..2765122 | + | 1116 | WP_000258599.1 | putative protein YneK | - |
| JJW05_RS13380 (2765272) | 2765272..2766462 | + | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| JJW05_RS13385 (2766487) | 2766487..2767152 | - | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| JJW05_RS13390 (2767364) | 2767364..2767798 | + | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| JJW05_RS13395 (2767818) | 2767818..2768201 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| JJW05_RS13400 (2768233) | 2768233..2768451 | + | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| JJW05_RS13405 (2768482) | 2768482..2769381 | - | 900 | WP_000087187.1 | O-acetylserine/cysteine exporter | - |
| JJW05_RS13410 (2769576) | 2769576..2770763 | + | 1188 | WP_001054204.1 | efflux MFS transporter YdeE | - |
| JJW05_RS13415 (2770890) | 2770890..2770985 | + | 96 | WP_000901367.1 | protein MgtS | - |
| JJW05_RS13420 (2770985) | 2770985..2771089 | + | 105 | WP_211180496.1 | protein MgtT | - |
| JJW05_RS13425 (2771204) | 2771204..2772094 | - | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| JJW05_RS13430 (2772349) | 2772349..2772741 | - | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| JJW05_RS13435 (2773017) | 2773017..2773535 | + | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| JJW05_RS13440 (2773579) | 2773579..2775624 | - | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| JJW05_RS13445 (2775761) | 2775761..2776507 | + | 747 | WP_000636571.1 | hypothetical protein | VF |
| JJW05_RS13450 (2776596) | 2776596..2777282 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| JJW05_RS13455 (2777459) | 2777459..2777662 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JJW05_RS13460 (2777697) | 2777697..2779157 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| JJW05_RS13465 (2779246) | 2779246..2780613 | - | 1368 | Protein_2631 | MHS family MFS transporter | - |
| JJW05_RS13470 (2781134) | 2781134..2781247 | + | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| JJW05_RS13475 (2781316) | 2781316..2781549 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JJW05_RS13480 (2781866) | 2781866..2782456 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JJW05_RS13485 (2782554) | 2782554..2783129 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| JJW05_RS13490 (2783129) | 2783129..2784091 | - | 963 | WP_001027733.1 | phage tail protein | - |
| JJW05_RS13495 (2784042) | 2784042..2784611 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| JJW05_RS13500 (2785000) | 2785000..2785233 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JJW05_RS13505 (2785291) | 2785291..2785701 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JJW05_RS13510 (2785853) | 2785853..2786026 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JJW05_RS13515 (2786198) | 2786198..2786353 | - | 156 | WP_001309517.1 | protein YnfN | - |
| JJW05_RS13520 (2786432) | 2786432..2786497 | - | 66 | WP_120795388.1 | small protein YnfR | - |
| JJW05_RS13525 (2786500) | 2786500..2786688 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| JJW05_RS13530 (2786699) | 2786699..2786911 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JJW05_RS13535 (2787274) | 2787274..2787771 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JJW05_RS13540 (2787768) | 2787768..2788301 | - | 534 | WP_001092971.1 | lysozyme | - |
| JJW05_RS13545 (2788298) | 2788298..2788609 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| JJW05_RS13550 (2788614) | 2788614..2788829 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JJW05_RS13555 (2789049) | 2789049..2789219 | + | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| JJW05_RS13560 (2789583) | 2789583..2789798 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JJW05_RS13565 (2790099) | 2790099..2790311 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JJW05_RS13570 (2790366) | 2790366..2790455 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| JJW05_RS13575 (2790733) | 2790733..2791485 | - | 753 | WP_001047135.1 | antitermination protein | - |
| JJW05_RS13580 (2791499) | 2791499..2792548 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| JJW05_RS13585 (2792550) | 2792550..2792828 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| JJW05_RS13590 (2792895) | 2792895..2793146 | - | 252 | WP_000980994.1 | protein Rem | - |
| JJW05_RS13595 (2793363) | 2793363..2793518 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JJW05_RS13600 (2793590) | 2793590..2793877 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JJW05_RS13605 (2793877) | 2793877..2794116 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JJW05_RS13610 (2794141) | 2794141..2794446 | + | 306 | WP_001326990.1 | protein YdfV | - |
| JJW05_RS13615 (2794649) | 2794649..2794981 | + | 333 | WP_001301033.1 | FlxA-like family protein | - |
| JJW05_RS13620 (2795418) | 2795418..2795567 | - | 150 | WP_011443592.1 | protein YdfW | - |
| JJW05_RS13625 (2795602) | 2795602..2795880 | - | 279 | Protein_2663 | hypothetical protein | - |
| JJW05_RS13630 (2795864) | 2795864..2796094 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| JJW05_RS13635 (2796178) | 2796178..2796585 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| JJW05_RS13640 (2796752) | 2796752..2796907 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| JJW05_RS22980 (2796909) | 2796909..2797037 | + | 129 | WP_000344964.1 | protein YdfB | - |
| JJW05_RS13645 (2797067) | 2797067..2797285 | + | 219 | WP_001171942.1 | protein YdfC | - |
| JJW05_RS13650 (2797853) | 2797853..2798041 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JJW05_RS13655 (2798038) | 2798038..2798229 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JJW05_RS13660 (2798322) | 2798322..2799089 | + | 768 | Protein_2671 | exonuclease | - |
| JJW05_RS13665 (2799086) | 2799086..2799592 | + | 507 | Protein_2672 | IS3 family transposase IS2 | Transposase |
| JJW05_RS13675 (2800920) | 2800920..2801117 | + | 198 | Protein_2674 | IS3 family transposase IS2 | Transposase |
| JJW05_RS13680 (2801131) | 2801131..2802288 | + | 1158 | Protein_2675 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JJW05_RS13685 (2802476) | 2802476..2803495 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JJW05_RS13690 (2803507) | 2803507..2804721 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JJW05_RS13695 (2804927) | 2804927..2805253 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| JJW05_RS13700 (2805388) | 2805388..2805729 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JJW05_RS13705 (2805764) | 2805764..2806324 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JJW05_RS13710 (2806327) | 2806327..2807037 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JJW05_RS13715 (2807145) | 2807145..2807450 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JJW05_RS13720 (2807649) | 2807649..2810075 | + | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|