MGE detailed information
MGE type: Prophage MGE length: 118508 bp
Accession: NZ_CP068247 Location: 1260395..1378902 Organism: Staphylococcus sp. T93 Replicon: chromosome
Accession: NZ_CP068247 Location: 1260395..1378902 Organism: Staphylococcus sp. T93 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JG553_RS05990 () | 1256550..1257731 | - | 1182 | WP_001025061.1 | MFS transporter | - |
| JG553_RS05995 () | 1257841..1258794 | + | 954 | WP_000526539.1 | TIGR01212 family radical SAM protein | - |
| JG553_RS06000 () | 1258791..1259354 | + | 564 | WP_000764419.1 | class I SAM-dependent methyltransferase | - |
| JG553_RS06005 () | 1259474..1259875 | - | 402 | WP_000757543.1 | MarR family transcriptional regulator | - |
| JG553_RS06010 () | 1260446..1261107 | - | 662 | Protein_1188 | IS1182 family transposase ISSau3 | Transposase |
| JG553_RS06015 () | 1261454..1262281 | - | 828 | WP_000266096.1 | alpha/beta hydrolase | - |
| JG553_RS06020 () | 1262284..1262403 | - | 120 | WP_001790712.1 | hypothetical protein | - |
| JG553_RS06025 () | 1262515..1263516 | + | 1002 | WP_001196354.1 | proline dehydrogenase | - |
| JG553_RS06030 () | 1263638..1264102 | - | 465 | WP_001008551.1 | 6,7-dimethyl-8-ribityllumazine synthase | - |
| JG553_RS06035 () | 1264115..1265296 | - | 1182 | WP_001159022.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| JG553_RS06040 () | 1265307..1265939 | - | 633 | WP_000493892.1 | riboflavin synthase | - |
| JG553_RS06045 () | 1265946..1266989 | - | 1044 | WP_000077344.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| JG553_RS06050 () | 1267470..1268972 | - | 1503 | WP_001261681.1 | FAD/NAD(P)-binding domain-containing protein | - |
| JG553_RS06055 () | 1269495..1269809 | + | 315 | WP_000221179.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JG553_RS06060 () | 1269809..1271101 | + | 1293 | WP_000989123.1 | arsenite efflux transporter membrane subunit ArsB | - |
| JG553_RS06065 () | 1271119..1271514 | + | 396 | WP_000163235.1 | arsenate reductase (thioredoxin) | - |
| JG553_RS06070 () | 1271809..1272663 | - | 855 | WP_001032833.1 | N-acetylglucosaminidase | - |
| JG553_RS06075 () | 1272939..1273163 | - | 225 | WP_000384171.1 | hypothetical protein | - |
| JG553_RS06080 () | 1273362..1273832 | + | 471 | WP_000671063.1 | RNA polymerase sigma factor SigS | - |
| JG553_RS06085 () | 1273945..1274388 | + | 444 | WP_001153742.1 | competence protein ComK | - |
| JG553_RS06090 () | 1274375..1274818 | - | 444 | WP_001030465.1 | hypothetical protein | - |
| JG553_RS06095 () | 1275114..1275749 | + | 636 | WP_001168904.1 | CPBP family intramembrane metalloprotease SdpA | - |
| JG553_RS06100 () | 1276189..1276902 | - | 714 | WP_001096494.1 | transaldolase | - |
| JG553_RS06105 () | 1277162..1277464 | + | 303 | WP_000091445.1 | hypothetical protein | - |
| JG553_RS06110 () | 1277720..1278085 | + | 366 | WP_001200542.1 | fluoride efflux transporter CrcB | - |
| JG553_RS06115 () | 1278082..1278435 | + | 354 | WP_000623471.1 | CrcB family protein | - |
| JG553_RS06120 () | 1278832..1280456 | + | 1625 | Protein_1210 | IS1182 family transposase ISSau3 | Transposase |
| JG553_RS06125 () | 1280519..1281352 | - | 834 | WP_000453320.1 | aldo/keto reductase | - |
| JG553_RS06130 () | 1281564..1282472 | - | 909 | WP_000366154.1 | NERD domain-containing protein | - |
| JG553_RS06135 () | 1282597..1283790 | - | 1194 | WP_000933822.1 | methionine adenosyltransferase | - |
| JG553_RS06140 () | 1284161..1285753 | + | 1593 | WP_000109906.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| JG553_RS06145 () | 1285889..1286374 | - | 486 | WP_000093392.1 | IS200-IS605 family transposase ISSep3 | Transposase |
| JG553_RS06150 () | 1286749..1287495 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| JG553_RS06155 () | 1287500..1287973 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| JG553_RS06160 () | 1288039..1288296 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| JG553_RS06165 () | 1288293..1289294 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| JG553_RS06170 () | 1289299..1290777 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| JG553_RS06175 () | 1290936..1291391 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| JG553_RS06180 () | 1291694..1292344 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| JG553_RS06185 () | 1292425..1293420 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| JG553_RS06190 () | 1293496..1294122 | + | 627 | WP_000669046.1 | hypothetical protein | - |
| JG553_RS06195 () | 1294163..1294507 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| JG553_RS06200 () | 1294605..1295156 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| JG553_RS06205 () | 1295374..1296015 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| JG553_RS06210 () | 1296129..1296314 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| JG553_RS06215 () | 1296316..1296492 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| JG553_RS06220 () | 1296503..1296886 | - | 384 | WP_000070812.1 | hypothetical protein | - |
| JG553_RS06225 () | 1297490..1297633 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| JG553_RS06230 () | 1297836..1297931 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| JG553_RS06235 () | 1298054..1298155 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| JG553_RS06240 () | 1298133..1298309 | - | 177 | Protein_1234 | transposase | - |
| JG553_RS06245 () | 1298503..1298880 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| JG553_RS06250 () | 1299400..1303512 | - | 4113 | WP_000831218.1 | ATP-binding protein | - |
| JG553_RS06255 () | 1304362..1305561 | - | 1200 | WP_000072624.1 | restriction endonuclease subunit S | - |
| JG553_RS06260 () | 1305554..1307110 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
| JG553_RS06265 () | 1307274..1307408 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| JG553_RS06270 () | 1307473..1308192 | - | 720 | WP_001038688.1 | hypothetical protein | VF |
| JG553_RS06275 () | 1308343..1309059 | - | 717 | WP_001038759.1 | hypothetical protein | VF |
| JG553_RS06280 () | 1309161..1309268 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| JG553_RS06285 () | 1309217..1309936 | - | 720 | WP_001038704.1 | hypothetical protein | VF |
| JG553_RS06290 () | 1310057..1310776 | - | 720 | WP_001038867.1 | hypothetical protein | VF |
| JG553_RS06295 () | 1310834..1311556 | - | 723 | WP_001039447.1 | hypothetical protein | VF |
| JG553_RS06300 () | 1311681..1312388 | - | 708 | WP_001039435.1 | hypothetical protein | VF |
| JG553_RS06305 () | 1313352..1313918 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| JG553_RS06310 () | 1314392..1315090 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| JG553_RS06315 () | 1315087..1315848 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| JG553_RS06320 () | 1315845..1316537 | - | 693 | WP_001096791.1 | hypothetical protein | VF |
| JG553_RS06325 () | 1316560..1317933 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| JG553_RS06330 () | 1317943..1318461 | - | 519 | WP_000504439.1 | flavoprotein | - |
| JG553_RS06335 () | 1318477..1319721 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| JG553_RS06340 () | 1319714..1322707 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| JG553_RS06345 () | 1322772..1322915 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| JG553_RS06350 () | 1323652..1323795 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| JG553_RS06355 () | 1324037..1325020 | - | 984 | WP_000782464.1 | hypothetical protein | VF |
| JG553_RS06360 () | 1325022..1325942 | - | 921 | WP_000878802.1 | hypothetical protein | VF |
| JG553_RS06365 () | 1326756..1327295 | + | 540 | WP_001790220.1 | hypothetical protein | - |
| JG553_RS06370 () | 1327308..1328096 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| JG553_RS06415 () | 1330553..1331107 | - | 555 | WP_000132889.1 | alpha/beta hydrolase | - |
| JG553_RS06420 () | 1331430..1332830 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| JG553_RS06425 () | 1332854..1333777 | - | 924 | WP_000162880.1 | ferrochelatase | - |
| JG553_RS06430 () | 1333835..1334872 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| JG553_RS06435 () | 1334862..1334972 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| JG553_RS06440 () | 1335135..1335638 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
| JG553_RS06445 () | 1335762..1336985 | - | 1224 | WP_001245769.1 | ABC transporter permease | - |
| JG553_RS06450 () | 1336978..1337718 | - | 741 | WP_000216878.1 | hypothetical protein | VF |
| JG553_RS06455 () | 1337852..1338274 | + | 423 | WP_000004981.1 | HIT family protein | - |
| JG553_RS06460 () | 1338416..1338781 | + | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| JG553_RS06465 () | 1339514..1340071 | + | 558 | WP_000477959.1 | DUF3267 domain-containing protein | - |
| JG553_RS06470 () | 1340276..1341238 | + | 963 | WP_000782121.1 | hypothetical protein | VF |
| JG553_RS06475 () | 1341359..1342300 | - | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| JG553_RS06480 () | 1342297..1345233 | - | 2937 | WP_000584648.1 | AAA family ATPase | - |
| JG553_RS06485 () | 1345223..1346419 | - | 1197 | WP_000238227.1 | exonuclease SbcCD subunit D | - |
| JG553_RS06490 () | 1346710..1346808 | - | 99 | WP_001791795.1 | hypothetical protein | - |
| JG553_RS06495 () | 1347191..1347535 | - | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| JG553_RS06500 () | 1347604..1348728 | - | 1125 | WP_000992527.1 | DUF445 domain-containing protein | - |
| JG553_RS06505 () | 1348907..1349371 | - | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| JG553_RS06510 () | 1349727..1350350 | - | 624 | WP_001045133.1 | hypothetical protein | VF |
| JG553_RS06515 () | 1350372..1351484 | - | 1113 | WP_000437967.1 | GAF domain-containing sensor histidine kinase | - |
| JG553_RS06520 () | 1351647..1352468 | + | 822 | WP_000669376.1 | RluA family pseudouridine synthase | - |
| JG553_RS06525 () | 1352931..1354316 | - | 1386 | WP_000116224.1 | class II fumarate hydratase | - |
| JG553_RS06530 () | 1354512..1354907 | - | 396 | WP_000901021.1 | hypothetical protein | - |
| JG553_RS06535 () | 1355684..1355836 | - | 153 | WP_000031108.1 | hypothetical protein | Toxin Detail |
| JG553_RS06540 () | 1355861..1356460 | - | 600 | WP_001251224.1 | glucosamine-6-phosphate isomerase | Antitoxin Detail |
| JG553_RS06545 () | 1356619..1357089 | - | 471 | WP_000181398.1 | tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL | - |
| JG553_RS06550 () | 1357094..1358221 | - | 1128 | WP_000379978.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| JG553_RS06555 () | 1358372..1359094 | - | 723 | WP_000590809.1 | hypothetical protein | VF |
| JG553_RS06560 () | 1359087..1360544 | - | 1458 | WP_000649907.1 | ABC transporter permease subunit | - |
| JG553_RS06565 () | 1360802..1361863 | - | 1062 | WP_000063582.1 | PTS transporter subunit IIC | - |
| JG553_RS06570 () | 1362356..1363675 | + | 1320 | Protein_1292 | ISL3 family transposase IS1181 | Transposase |
| JG553_RS06730 () | 1372264..1372710 | - | 447 | WP_000110011.1 | peroxide-responsive transcriptional repressor PerR | - |
| JG553_RS06735 () | 1372807..1373757 | - | 951 | WP_000869455.1 | phosphoglycerate dehydrogenase | - |
| JG553_RS06740 () | 1373763..1374218 | - | 456 | WP_000939521.1 | thioredoxin-dependent thiol peroxidase | - |
| JG553_RS06745 () | 1374299..1375588 | + | 1290 | WP_001011598.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| JG553_RS06750 () | 1375881..1376975 | + | 1095 | WP_001236371.1 | aromatic acid exporter family protein | - |
| JG553_RS06755 () | 1377065..1377157 | - | 93 | WP_001791878.1 | hypothetical protein | - |
| JG553_RS06760 () | 1377166..1378902 | - | 1737 | WP_000597238.1 | hypothetical protein | VF |
| JG553_RS06765 () | 1379193..1379735 | - | 543 | WP_000251253.1 | DUF402 domain-containing protein | - |
| JG553_RS06770 () | 1380037..1381074 | - | 1038 | WP_000284752.1 | A/G-specific adenine glycosylase | - |
| JG553_RS06775 () | 1381226..1382203 | + | 978 | WP_000379098.1 | metal-dependent hydrolase | - |
| JG553_RS06780 () | 1382464..1383300 | - | 837 | WP_000886468.1 | membrane protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|