MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 184074 bp
Accession: NZ_CP068244 Location: 390867..574940 Organism: Enterococcus faecium strain fac90 Replicon: chromosome
Accession: NZ_CP068244 Location: 390867..574940 Organism: Enterococcus faecium strain fac90 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JG556_RS01845 () | 386120..387037 | - | 918 | WP_002286294.1 | ribokinase | - |
| JG556_RS01850 () | 387146..388159 | - | 1014 | WP_002298484.1 | substrate-binding domain-containing protein | - |
| JG556_RS01855 () | 388240..388839 | - | 600 | WP_010718029.1 | cysteine hydrolase | - |
| JG556_RS01860 () | 389024..389725 | + | 702 | WP_002296067.1 | ABC transporter ATP-binding protein | - |
| JG556_RS01865 () | 389735..392446 | + | 2712 | WP_002301347.1 | ABC transporter permease | - |
| JG556_RS01870 () | 392967..394595 | + | 1629 | WP_002286285.1 | alpha,alpha-phosphotrehalase | - |
| JG556_RS01875 () | 394655..395836 | - | 1182 | WP_002317496.1 | AI-2E family transporter | - |
| JG556_RS01880 () | 396088..397611 | + | 1524 | WP_010718030.1 | hypothetical protein | VF |
| JG556_RS01885 () | 397680..398408 | - | 729 | WP_002286278.1 | LytTR family DNA-binding domain-containing protein | - |
| JG556_RS01890 () | 398421..399701 | - | 1281 | WP_002298495.1 | sensor histidine kinase | - |
| JG556_RS01895 () | 399842..400444 | - | 603 | WP_002296063.1 | accessory gene regulator B family protein | - |
| JG556_RS01900 () | 400574..401752 | - | 1179 | WP_000997695.1 | IS256 family transposase ISEf1 | Transposase |
| JG556_RS01905 () | 402035..402241 | + | 207 | WP_002286271.1 | hypothetical protein | - |
| JG556_RS01910 () | 402553..403272 | + | 720 | WP_002321450.1 | deoxynucleoside kinase | - |
| JG556_RS01915 () | 403353..404036 | - | 684 | WP_002286265.1 | DUF1275 domain-containing protein | - |
| JG556_RS01920 () | 404268..406454 | + | 2187 | WP_002286261.1 | ATP-dependent helicase | - |
| JG556_RS01925 () | 406805..407215 | + | 411 | WP_002286258.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| JG556_RS01930 () | 407229..407585 | + | 357 | WP_002286247.1 | arsenate reductase | - |
| JG556_RS01950 () | 413341..413811 | - | 471 | WP_002301238.1 | glutathione peroxidase | - |
| JG556_RS01955 () | 413970..414428 | - | 459 | WP_002289439.1 | hypothetical protein | VF |
| JG556_RS01960 () | 414599..415744 | - | 1146 | WP_002301236.1 | cystathionine gamma-synthase | - |
| JG556_RS01965 () | 415757..416674 | - | 918 | WP_002289436.1 | cysteine synthase family protein | - |
| JG556_RS01970 () | 417102..417665 | + | 564 | WP_002289434.1 | elongation factor P | - |
| JG556_RS01975 () | 417766..417936 | + | 171 | WP_002301233.1 | hypothetical protein | - |
| JG556_RS01980 () | 418151..419410 | + | 1260 | WP_002286883.1 | diaminopimelate decarboxylase | - |
| JG556_RS01985 () | 419397..420197 | + | 801 | WP_002294349.1 | diaminopimelate epimerase | - |
| JG556_RS01990 () | 420200..421081 | + | 882 | WP_002301231.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| JG556_RS01995 () | 421078..421794 | + | 717 | WP_002286877.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| JG556_RS02000 () | 421800..422495 | + | 696 | WP_002301230.1 | hypothetical protein | VF |
| JG556_RS02005 () | 422511..423512 | + | 1002 | WP_010718326.1 | aspartate-semialdehyde dehydrogenase | - |
| JG556_RS02010 () | 423509..424870 | + | 1362 | WP_010718325.1 | aspartate kinase | - |
| JG556_RS02015 () | 424830..425981 | + | 1152 | WP_002301227.1 | amidohydrolase | - |
| JG556_RS02020 () | 425956..427125 | + | 1170 | WP_002321347.1 | pyridoxal phosphate-dependent aminotransferase | - |
| JG556_RS02025 () | 427301..428680 | + | 1380 | WP_202074390.1 | FAD-dependent oxidoreductase | - |
| JG556_RS02030 () | 429084..429881 | + | 798 | Protein_402 | IS3 family transposase ISEfa10 | Transposase |
| JG556_RS02035 () | 430070..430738 | + | 669 | WP_002300355.1 | DUF421 domain-containing protein | - |
| JG556_RS02040 () | 430934..431320 | - | 387 | WP_002293692.1 | hypothetical protein | - |
| JG556_RS02045 () | 431292..432674 | - | 1383 | WP_002286860.1 | Y-family DNA polymerase | - |
| JG556_RS02050 () | 432830..434017 | - | 1188 | WP_002286858.1 | galactokinase | - |
| JG556_RS02055 () | 434024..435055 | - | 1032 | WP_002300353.1 | galactose mutarotase | - |
| JG556_RS02060 () | 435071..436525 | - | 1455 | WP_002300351.1 | glycoside-pentoside-hexuronide (GPH):cation symporter | - |
| JG556_RS02065 () | 436700..437605 | + | 906 | WP_002286852.1 | AraC family transcriptional regulator | - |
| JG556_RS02070 () | 437696..438373 | + | 678 | WP_002300349.1 | NAD(P)H-dependent oxidoreductase | - |
| JG556_RS02075 () | 438370..438540 | + | 171 | WP_002286849.1 | hypothetical protein | - |
| JG556_RS02080 () | 438654..439550 | + | 897 | WP_002300348.1 | LysM peptidoglycan-binding domain-containing protein | - |
| JG556_RS02085 () | 439605..440975 | - | 1371 | WP_043902870.1 | amino acid permease | - |
| JG556_RS02090 () | 441213..441959 | + | 747 | WP_002293686.1 | hypothetical protein | VF |
| JG556_RS02095 () | 441956..442795 | + | 840 | WP_002286845.1 | hypothetical protein | VF |
| JG556_RS02100 () | 442796..443746 | + | 951 | WP_002300346.1 | hypothetical protein | VF |
| JG556_RS02105 () | 443886..444638 | + | 753 | WP_002300345.1 | hypothetical protein | - |
| JG556_RS02110 () | 444657..445808 | + | 1152 | WP_002293684.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| JG556_RS02115 () | 446192..446800 | + | 609 | WP_002286836.1 | LysM domain-containing protein | - |
| JG556_RS02120 () | 446968..448605 | + | 1638 | WP_202074391.1 | phosphoenolpyruvate carboxykinase (ATP) | - |
| JG556_RS02125 () | 448677..449789 | - | 1113 | WP_002286834.1 | FAD-binding oxidoreductase | - |
| JG556_RS02130 () | 449864..451237 | - | 1374 | WP_002293681.1 | MFS transporter | - |
| JG556_RS02135 () | 451458..451652 | + | 195 | WP_002300337.1 | hypothetical protein | - |
| JG556_RS02140 () | 451667..452074 | + | 408 | WP_002323732.1 | GyrI-like domain-containing protein | - |
| JG556_RS02145 () | 452172..452627 | + | 456 | WP_002286829.1 | arginine repressor | - |
| JG556_RS02150 () | 452645..454147 | + | 1503 | WP_010718320.1 | hypothetical protein | VF |
| JG556_RS02155 () | 454242..454448 | + | 207 | WP_002293677.1 | hypothetical protein | - |
| JG556_RS02160 () | 454534..454935 | + | 402 | WP_010718319.1 | organic hydroperoxide resistance protein | - |
| JG556_RS02165 () | 455093..456421 | + | 1329 | WP_010718318.1 | FAD-dependent oxidoreductase | - |
| JG556_RS02170 () | 456443..457069 | + | 627 | WP_002286816.1 | cysteine hydrolase | - |
| JG556_RS02175 () | 457252..457833 | + | 582 | WP_002331663.1 | TetR/AcrR family transcriptional regulator | - |
| JG556_RS02180 () | 458198..458773 | + | 576 | WP_010718317.1 | SOS response-associated peptidase family protein | - |
| JG556_RS02185 () | 458978..459316 | - | 339 | WP_002286804.1 | hypothetical protein | - |
| JG556_RS02190 () | 459604..459834 | + | 231 | WP_002323011.1 | hypothetical protein | Antitoxin Detail |
| JG556_RS02195 () | 459834..460175 | + | 342 | WP_002302307.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| JG556_RS02200 () | 461025..461210 | + | 186 | WP_002304207.1 | hypothetical protein | - |
| JG556_RS02210 () | 462846..462971 | + | 126 | WP_002352139.1 | LPXTG cell wall anchor domain-containing protein | - |
| JG556_RS02215 () | 463045..463938 | + | 894 | WP_002326335.1 | hypothetical protein | VF |
| JG556_RS02220 () | 464122..464796 | + | 675 | WP_002291233.1 | hypothetical protein | VF |
| JG556_RS02225 () | 464814..465839 | + | 1026 | WP_010718316.1 | sensor histidine kinase | - |
| JG556_RS02230 () | 465928..466794 | + | 867 | WP_002286769.1 | glucose transporter GlcU | - |
| JG556_RS02235 () | 466831..468207 | + | 1377 | WP_002286768.1 | amino acid permease | - |
| JG556_RS02240 () | 468308..469504 | - | 1197 | WP_002286766.1 | toxic anion resistance protein | - |
| JG556_RS02245 () | 469628..470290 | - | 663 | WP_010718315.1 | 5-bromo-4-chloroindolyl phosphate hydrolysis family protein | - |
| JG556_RS02250 () | 470518..471081 | + | 564 | WP_002325125.1 | NUDIX hydrolase | - |
| JG556_RS02255 () | 471094..471378 | + | 285 | WP_002286760.1 | cell wall synthase accessory phosphoprotein MacP | - |
| JG556_RS02260 () | 471397..472089 | + | 693 | WP_002291218.1 | 5'-methylthioadenosine/adenosylhomocysteine nucleosidase | - |
| JG556_RS02265 () | 472101..472646 | + | 546 | WP_002291217.1 | hypothetical protein | VF |
| JG556_RS02270 () | 472918..476184 | + | 3267 | WP_010718314.1 | right-handed parallel beta-helix repeat-containing protein | - |
| JG556_RS02275 () | 476967..478874 | - | 1908 | WP_202074392.1 | M13 family peptidase | - |
| JG556_RS02280 () | 479004..479879 | + | 876 | WP_010718313.1 | hypothetical protein | - |
| JG556_RS02285 () | 479959..480933 | + | 975 | WP_002286741.1 | ribose-phosphate diphosphokinase | - |
| JG556_RS02290 () | 481113..482258 | + | 1146 | WP_002295158.1 | cysteine desulfurase | - |
| JG556_RS02295 () | 482395..482739 | + | 345 | WP_002286736.1 | DUF1831 domain-containing protein | - |
| JG556_RS02300 () | 483010..484296 | + | 1287 | WP_010718312.1 | multidrug efflux MFS transporter EfmA | - |
| JG556_RS02305 () | 484434..485033 | - | 600 | WP_002291205.1 | metallophosphoesterase | - |
| JG556_RS02310 () | 485437..486558 | + | 1122 | WP_010718311.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| JG556_RS02315 () | 486804..488225 | + | 1422 | WP_010718310.1 | arginine-ornithine antiporter | - |
| JG556_RS02320 () | 488239..489357 | + | 1119 | WP_010718309.1 | aminotransferase | - |
| JG556_RS02325 () | 489417..490709 | - | 1293 | WP_002325116.1 | multidrug efflux MFS transporter | - |
| JG556_RS02330 () | 490841..491419 | + | 579 | WP_077150393.1 | TetR/AcrR family transcriptional regulator | - |
| JG556_RS02335 () | 491548..491925 | + | 378 | WP_002291196.1 | DUF1033 family protein | - |
| JG556_RS02340 () | 491858..493930 | + | 2073 | WP_033583050.1 | DNA topoisomerase III | - |
| JG556_RS02345 () | 494141..495088 | - | 948 | WP_002289773.1 | hypothetical protein | VF |
| JG556_RS02350 () | 495334..495798 | + | 465 | WP_002291193.1 | methylated-DNA--[protein]-cysteine S-methyltransferase | - |
| JG556_RS02355 () | 495860..496903 | - | 1044 | WP_002291191.1 | putative sulfate exporter family transporter | - |
| JG556_RS02360 () | 497280..498245 | - | 966 | WP_010718307.1 | TDT family transporter | - |
| JG556_RS02365 () | 498479..499324 | + | 846 | WP_002291186.1 | hypothetical protein | VF |
| JG556_RS02370 () | 499515..500702 | + | 1188 | WP_002291183.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| JG556_RS02375 () | 500708..501064 | + | 357 | WP_002295166.1 | arsenate reductase family protein | - |
| JG556_RS02380 () | 501066..501404 | + | 339 | WP_002291179.1 | glycine cleavage system protein H | - |
| JG556_RS02385 () | 501799..502833 | + | 1035 | WP_002304234.1 | hypothetical protein | VF |
| JG556_RS02390 () | 502826..503512 | + | 687 | WP_002287674.1 | ABC transporter permease | - |
| JG556_RS02395 () | 503536..504384 | + | 849 | WP_002287678.1 | hypothetical protein | VF |
| JG556_RS02400 () | 504581..505354 | + | 774 | WP_002287679.1 | Fe-S cluster assembly ATPase SufC | - |
| JG556_RS02405 () | 505367..506653 | + | 1287 | WP_002287681.1 | Fe-S cluster assembly protein SufD | - |
| JG556_RS02410 () | 506650..507885 | + | 1236 | WP_010718306.1 | cysteine desulfurase | - |
| JG556_RS02415 () | 507872..508342 | + | 471 | WP_002287684.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| JG556_RS02420 () | 508347..509738 | + | 1392 | WP_002287686.1 | Fe-S cluster assembly protein SufB | - |
| JG556_RS02425 () | 509839..510978 | - | 1140 | Protein_481 | hypothetical protein ; Integrase | Integrase |
| JG556_RS02430 () | 511029..511382 | - | 354 | Protein_482 | transcriptional regulator | - |
| JG556_RS02440 () | 513319..513633 | + | 315 | WP_002327679.1 | hypothetical protein | - |
| JG556_RS02445 () | 513686..514444 | - | 759 | WP_033603054.1 | hypothetical protein | - |
| JG556_RS02450 () | 514565..514810 | + | 246 | WP_002313380.1 | helix-turn-helix domain-containing protein | - |
| JG556_RS02455 () | 514886..515164 | + | 279 | WP_002314576.1 | hypothetical protein | - |
| JG556_RS02460 () | 515584..516746 | + | 1163 | WP_202074393.1 | IS3 family transposase IS1485 | Transposase |
| JG556_RS02465 () | 517177..517602 | + | 426 | WP_002316489.1 | hypothetical protein | - |
| JG556_RS02470 () | 518212..519708 | - | 1497 | WP_202074394.1 | helix-turn-helix domain-containing protein | - |
| JG556_RS02475 () | 520063..523515 | + | 3453 | WP_010718304.1 | hypothetical protein | VF |
| JG556_RS02480 () | 523518..524939 | + | 1422 | WP_002327400.1 | hypothetical protein | VF |
| JG556_RS02485 () | 524936..526813 | + | 1878 | WP_002306734.1 | hypothetical protein | VF |
| JG556_RS02490 () | 526905..527735 | + | 831 | WP_010718303.1 | hypothetical protein | VF |
| JG556_RS02500 () | 530053..530343 | - | 291 | WP_010718298.1 | hypothetical protein | - |
| JG556_RS02505 () | 530424..530927 | - | 504 | Protein_497 | peptidase | - |
| JG556_RS02510 () | 530890..531126 | + | 237 | WP_071243184.1 | helix-turn-helix domain-containing protein | - |
| JG556_RS02515 () | 531363..533477 | + | 2115 | WP_010718296.1 | hypothetical protein | VF |
| JG556_RS02520 () | 533658..533972 | - | 315 | Protein_500 | transposase | - |
| JG556_RS02525 () | 534045..534281 | + | 237 | WP_202074395.1 | hypothetical protein | - |
| JG556_RS02530 () | 534500..534691 | + | 192 | WP_002314345.1 | hypothetical protein | - |
| JG556_RS02535 () | 535209..536558 | + | 1350 | WP_063285975.1 | primase C-terminal domain-containing protein | - |
| JG556_RS02540 () | 536602..536796 | + | 195 | WP_002311030.1 | hypothetical protein | - |
| JG556_RS02545 () | 536810..536950 | + | 141 | WP_002316998.1 | hypothetical protein | - |
| JG556_RS02550 () | 536928..538769 | + | 1842 | WP_202074480.1 | type IA DNA topoisomerase | - |
| JG556_RS02555 () | 539326..539514 | + | 189 | WP_038809792.1 | hypothetical protein | - |
| JG556_RS02560 () | 540239..540661 | + | 423 | WP_002307506.1 | cupin domain-containing protein | - |
| JG556_RS02565 () | 540745..541398 | + | 654 | WP_025370695.1 | hypothetical protein | VF |
| JG556_RS02570 () | 541395..542159 | + | 765 | WP_002311027.1 | iron export ABC transporter permease subunit FetB | - |
| JG556_RS02575 () | 542669..543831 | + | 1163 | WP_086956687.1 | IS3 family transposase IS1485 | Transposase |
| JG556_RS02580 () | 545800..546465 | - | 666 | WP_002326331.1 | helix-turn-helix domain-containing protein | - |
| JG556_RS02585 () | 546645..548627 | + | 1983 | WP_064485101.1 | DUF1430 domain-containing protein | - |
| JG556_RS02590 () | 548631..549269 | + | 639 | WP_002318710.1 | hypothetical protein | VF |
| JG556_RS02595 () | 549644..550555 | + | 912 | WP_002316482.1 | hypothetical protein | VF |
| JG556_RS02600 () | 550771..551208 | + | 438 | WP_002328523.1 | hypothetical protein | - |
| JG556_RS02605 () | 551303..552187 | + | 885 | WP_002328522.1 | diacylglycerol kinase family lipid kinase | - |
| JG556_RS02610 () | 552408..555578 | + | 3171 | WP_063285981.1 | hypothetical protein | - |
| JG556_RS02615 () | 555598..556626 | + | 1029 | WP_010718292.1 | DUF916 and DUF3324 domain-containing protein | - |
| JG556_RS02620 () | 556623..557381 | + | 759 | WP_002321097.1 | WxL domain-containing protein | - |
| JG556_RS02625 () | 557467..558207 | - | 741 | WP_002306055.1 | LytTR family DNA-binding domain-containing protein | - |
| JG556_RS02630 () | 558268..559521 | + | 1254 | WP_010718291.1 | GHKL domain-containing protein | - |
| JG556_RS02635 () | 559822..560070 | + | 249 | Protein_523 | winged helix-turn-helix transcriptional regulator | - |
| JG556_RS02640 () | 560192..560518 | + | 327 | WP_002291148.1 | nucleotide pyrophosphohydrolase | - |
| JG556_RS02645 () | 560586..561299 | + | 714 | WP_002318718.1 | class A sortase | - |
| JG556_RS02650 () | 561609..562461 | + | 853 | Protein_526 | PRD domain-containing protein | - |
| JG556_RS02655 () | 562582..564447 | + | 1866 | WP_010718289.1 | beta-glucoside-specific PTS transporter subunit IIABC | - |
| JG556_RS02660 () | 564461..565903 | + | 1443 | WP_002313403.1 | glycoside hydrolase family 1 protein | - |
| JG556_RS02665 () | 566011..566712 | + | 702 | WP_002346739.1 | GntR family transcriptional regulator | - |
| JG556_RS02670 () | 566871..567350 | + | 480 | Protein_530 | PTS fructose transporter subunit IIC | - |
| JG556_RS02675 () | 568198..568773 | + | 576 | WP_002293608.1 | TIGR00730 family Rossman fold protein | - |
| JG556_RS02680 () | 568773..569213 | + | 441 | WP_101735353.1 | nucleoside 2-deoxyribosyltransferase | - |
| JG556_RS02685 () | 569229..569930 | + | 702 | WP_002340345.1 | deoxynucleoside kinase | - |
| JG556_RS02690 () | 570417..570842 | - | 426 | WP_002299985.1 | hypothetical protein | - |
| JG556_RS02695 () | 571216..572187 | + | 972 | WP_101735354.1 | LacI family transcriptional regulator | - |
| JG556_RS02700 () | 572219..573616 | + | 1398 | WP_125182871.1 | glycoside hydrolase family 1 protein | - |
| JG556_RS02705 () | 573775..574398 | + | 624 | WP_002293828.1 | hypothetical protein | - |
| JG556_RS02710 () | 574874..576967 | + | 2094 | WP_010718287.1 | LTA synthase family protein | - |
| JG556_RS02715 () | 577127..577993 | + | 867 | WP_002325855.1 | Rgg/GadR/MutR family transcriptional regulator | - |
| JG556_RS02720 () | 578015..578452 | - | 438 | WP_002293327.1 | nucleoside-diphosphate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|