MGE detailed information
MGE type: Conjugative plasmid MGE length: 187192 bp
Accession: NZ_CP068149 Location: 1..187192 Organism: Serratia liquefaciens strain FDAARGOS_1081 Replicon: plasmid unnamed
Accession: NZ_CP068149 Location: 1..187192 Organism: Serratia liquefaciens strain FDAARGOS_1081 Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I38_RS24845 () | 336..2726 | + | 2391 | WP_201896557.1 | hypothetical protein | VF |
| I6I38_RS24850 () | 2940..3224 | + | 285 | WP_201896558.1 | hypothetical protein | - |
| I6I38_RS24855 () | 5167..6198 | + | 1032 | WP_201896559.1 | IS630 family transposase ISEc33 | Transposase |
| I6I38_RS24860 () | 6828..7859 | + | 1032 | WP_201896559.1 | IS630 family transposase ISEc33 | Transposase |
| I6I38_RS24865 () | 8194..8796 | + | 603 | WP_201896560.1 | Transcriptional regulatory protein RcsB | VF |
| I6I38_RS24870 () | 8924..9805 | + | 882 | WP_201896561.1 | hypothetical protein | VF |
| I6I38_RS24875 () | 10222..10503 | + | 282 | WP_201896562.1 | hypothetical protein | VF |
| I6I38_RS24880 () | 10802..17206 | + | 6405 | WP_201896563.1 | hypothetical protein | VF |
| I6I38_RS24885 () | 17220..19187 | + | 1968 | WP_201896564.1 | hypothetical protein | - |
| I6I38_RS24890 () | 19246..22032 | + | 2787 | WP_201896565.1 | hypothetical protein | - |
| I6I38_RS24895 () | 22149..22844 | + | 696 | WP_201896566.1 | IS6 family transposase ISEas1 | Transposase |
| I6I38_RS24900 () | 23007..23696 | + | 690 | Protein_11 | hypothetical protein | VF |
| I6I38_RS24905 () | 23881..24315 | + | 435 | WP_201896602.1 | hypothetical protein | - |
| I6I38_RS24910 () | 24327..25550 | + | 1224 | Protein_13 | IS91 family transposase ISVa3 | Transposase |
| I6I38_RS24915 () | 26058..27404 | + | 1347 | WP_201896603.1 | ISNCY family transposase ISLad2 | Transposase |
| I6I38_RS24920 () | 27726..28757 | - | 1032 | WP_201896559.1 | IS630 family transposase ISEc33 | Transposase |
| I6I38_RS24925 () | 30019..31050 | - | 1032 | WP_201896567.1 | IS630 family transposase ISEc33 | Transposase |
| I6I38_RS24930 () | 31649..32224 | - | 576 | WP_201896604.1 | Tyrosine recombinase XerC | VF |
| I6I38_RS24940 () | 34167..34370 | - | 204 | WP_201896556.1 | IS91 family transposase ISVa3 | Transposase |
| I6I38_RS24945 () | 35177..37567 | + | 2391 | WP_201896557.1 | hypothetical protein | VF |
| I6I38_RS24950 () | 37781..38065 | + | 285 | WP_201896568.1 | hypothetical protein | - |
| I6I38_RS24955 () | 38473..38742 | + | 270 | Protein_22 | IS3 family transposase ISSpr1 | Transposase |
| I6I38_RS24960 () | 38956..39240 | + | 285 | WP_201896569.1 | hypothetical protein | - |
| I6I38_RS24965 () | 39682..39939 | + | 258 | WP_201896570.1 | hypothetical protein | - |
| I6I38_RS24970 () | 40780..40980 | - | 201 | WP_201896571.1 | hypothetical protein | - |
| I6I38_RS24975 () | 41225..42340 | - | 1116 | WP_201896572.1 | terpene synthase family protein | - |
| I6I38_RS24980 () | 42478..42657 | - | 180 | Protein_27 | short-chain dehydrogenase | - |
| I6I38_RS24985 () | 42657..42983 | - | 327 | WP_201896573.1 | nuclear transport factor 2 family protein | - |
| I6I38_RS24990 () | 43074..43400 | + | 327 | Protein_29 | winged helix-turn-helix transcriptional regulator | - |
| I6I38_RS24995 () | 43653..44681 | - | 1029 | WP_201896574.1 | hypothetical protein | - |
| I6I38_RS25000 () | 45814..46294 | - | 481 | Protein_31 | DUF4158 domain-containing protein | - |
| I6I38_RS25005 () | 46344..46584 | - | 241 | Protein_32 | Hin recombinase | - |
| I6I38_RS25010 () | 47065..48471 | + | 1407 | WP_201896605.1 | 8-oxoguanine deaminase | - |
| I6I38_RS25015 () | 48975..49211 | + | 237 | Protein_34 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I38_RS25030 () | 50556..50905 | + | 350 | Protein_35 | transposase zinc-binding domain-containing protein | - |
| I6I38_RS25035 () | 50923..52033 | - | 1111 | Protein_36 | IS3 family transposase IS1400 | Transposase |
| I6I38_RS25040 () | 52113..52869 | + | 757 | Protein_37 | transposase | - |
| I6I38_RS25045 () | 53271..54243 | - | 973 | Protein_38 | hypothetical protein | VF |
| I6I38_RS25050 () | 54243..54629 | - | 387 | WP_201896575.1 | IS3 family transposase IS1203 | Transposase |
| I6I38_RS25055 () | 54629..54982 | - | 354 | WP_201896576.1 | IS3 family transposase ISEc25 | Transposase |
| I6I38_RS25060 () | 55023..55169 | - | 147 | Protein_41 | IS6 family transposase IS15DI | Transposase |
| I6I38_RS25065 () | 55584..55841 | + | 258 | WP_201896577.1 | hypothetical protein | - |
| I6I38_RS25070 () | 55916..56377 | + | 462 | WP_201896578.1 | lysozyme | - |
| I6I38_RS25075 () | 56394..56858 | + | 465 | WP_201896579.1 | lysis protein | - |
| I6I38_RS25080 () | 56996..57160 | - | 165 | Protein_45 | IS1 family transposase IS1N | Transposase |
| I6I38_RS25085 () | 57492..58379 | + | 888 | WP_201896580.1 | hypothetical protein | - |
| I6I38_RS25090 () | 58603..58815 | + | 213 | Protein_47 | IS630 family transposase ISVch6 | Transposase |
| I6I38_RS25095 () | 58844..59173 | + | 330 | Protein_48 | IS630 family transposase ISVch6 | Transposase |
| I6I38_RS25100 () | 59123..59515 | - | 393 | Protein_49 | DUF2913 family protein | - |
| I6I38_RS25105 () | 59544..60251 | - | 708 | Protein_50 | hypothetical protein | VF |
| I6I38_RS25110 () | 60316..61317 | - | 1002 | WP_201896581.1 | IS91 family transposase ISAzo26 | Transposase |
| I6I38_RS25115 () | 61314..62228 | - | 915 | WP_201896582.1 | tyrosine-type recombinase/integrase | - |
| I6I38_RS25120 () | 62209..63483 | - | 1275 | WP_201896583.1 | tyrosine-type recombinase/integrase | - |
| I6I38_RS25125 () | 63656..63868 | - | 213 | Protein_54 | Rpn family recombination-promoting nuclease/putative transposase | - |
| I6I38_RS25130 () | 63966..65945 | - | 1980 | WP_201896584.1 | hypothetical protein | VF |
| I6I38_RS25135 () | 66023..66322 | - | 300 | WP_201896606.1 | hypothetical protein | - |
| I6I38_RS25140 () | 67085..67960 | - | 876 | WP_201896553.1 | hypothetical protein | - |
| I6I38_RS25150 () | 69431..70149 | - | 719 | Protein_59 | IS3 family transposase ISEc25 | Transposase |
| I6I38_RS25155 () | 70508..70798 | + | 291 | WP_201896586.1 | hypothetical protein | - |
| I6I38_RS25160 () | 71127..72461 | + | 1335 | WP_201896587.1 | alpha/beta fold hydrolase | - |
| I6I38_RS25165 () | 72818..73054 | + | 237 | WP_201896607.1 | hypothetical protein | - |
| I6I38_RS25170 () | 73035..74246 | + | 1212 | WP_201896588.1 | IS91 family transposase ISSbo1 | Transposase |
| I6I38_RS25175 () | 74681..75196 | - | 516 | WP_201896589.1 | hypothetical protein | - |
| I6I38_RS25180 () | 75974..76183 | + | 210 | Protein_65 | transposase | - |
| I6I38_RS25185 () | 76214..77740 | - | 1527 | WP_201896590.1 | glycosyltransferase family 39 protein | - |
| I6I38_RS25190 () | 78854..79600 | + | 747 | WP_201896591.1 | tyrosine-type recombinase/integrase | - |
| I6I38_RS25195 () | 80074..80301 | + | 228 | WP_201896592.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| I6I38_RS25200 () | 80301..80651 | + | 351 | WP_201896593.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| I6I38_RS25205 () | 80881..81870 | - | 990 | WP_201896594.1 | replication initiation protein | - |
| I6I38_RS25210 () | 83065..84231 | + | 1167 | WP_201896595.1 | hypothetical protein | VF |
| I6I38_RS25215 () | 84231..85199 | + | 969 | WP_201896596.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| I6I38_RS25220 () | 85703..86113 | + | 411 | WP_201896608.1 | IS66 family transposase ISEcl6 | Transposase |
| I6I38_RS25225 () | 86068..86919 | + | 852 | Protein_74 | IS66 family transposase ISKox1 | Transposase |
| I6I38_RS25230 () | 87062..88285 | - | 1224 | WP_201896597.1 | IS91 family transposase ISVa3 | Transposase |
| I6I38_RS25235 () | 88297..88755 | - | 459 | WP_201896609.1 | hypothetical protein | - |
| I6I38_RS25240 () | 89258..89506 | + | 249 | WP_127146982.1 | helix-turn-helix domain-containing protein | - |
| I6I38_RS25245 () | 89623..90051 | - | 429 | WP_201896598.1 | plasmid protein | - |
| I6I38_RS25250 () | 90135..90407 | - | 273 | WP_127146980.1 | ribbon-helix-helix domain-containing protein | - |
| I6I38_RS25255 () | 90466..91110 | - | 645 | WP_127147017.1 | Iron-sulfur cluster carrier protein | VF |
| I6I38_RS25260 () | 91472..92242 | + | 771 | WP_201896599.1 | N-6 DNA methylase | - |
| I6I38_RS25265 () | 92704..93198 | + | 495 | WP_201896600.1 | hypothetical protein | - |
| I6I38_RS25270 () | 93245..93586 | + | 342 | WP_201896601.1 | DUF3085 domain-containing protein | - |
| I6I38_RS25275 () | 93842..94816 | + | 975 | WP_201896501.1 | StbA family protein | - |
| I6I38_RS25280 () | 94819..95223 | + | 405 | WP_201896502.1 | plasmid partitioning/stability family protein | - |
| I6I38_RS25285 () | 95307..95864 | + | 558 | WP_201896503.1 | helix-turn-helix transcriptional regulator | - |
| I6I38_RS25290 () | 96290..96697 | + | 408 | WP_201896504.1 | hypothetical protein | - |
| I6I38_RS25295 () | 97326..97832 | + | 507 | WP_201896505.1 | antirestriction protein | - |
| I6I38_RS25300 () | 98514..100556 | + | 2043 | WP_201896506.1 | ParB/RepB/Spo0J family partition protein | - |
| I6I38_RS25305 () | 100598..101062 | + | 465 | WP_201896507.1 | conjugation system SOS inhibitor PsiB | - |
| I6I38_RS25310 () | 101059..101787 | + | 729 | WP_128865572.1 | plasmid SOS inhibition protein A | - |
| I6I38_RS25315 () | 101903..102214 | + | 312 | WP_017891116.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| I6I38_RS25320 () | 102253..102654 | + | 402 | WP_170868577.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| I6I38_RS25325 () | 103218..103670 | + | 453 | WP_128865574.1 | hypothetical protein | - |
| I6I38_RS25330 () | 103731..103880 | + | 150 | WP_165366321.1 | hypothetical protein | - |
| I6I38_RS25335 () | 104327..105145 | + | 819 | WP_201896508.1 | DUF945 domain-containing protein | - |
| I6I38_RS25340 () | 105193..105495 | + | 303 | WP_128865576.1 | hypothetical protein | - |
| I6I38_RS25345 () | 105627..105989 | - | 363 | WP_142106025.1 | mobilization protein MobC | - |
| I6I38_RS25350 () | 106237..106542 | + | 306 | WP_017891124.1 | hypothetical protein | - |
| I6I38_RS25355 () | 106553..108508 | + | 1956 | WP_128865578.1 | hypothetical protein | Relaxase |
| I6I38_RS25360 () | 108567..108890 | - | 324 | WP_201896509.1 | hypothetical protein | - |
| I6I38_RS25365 () | 108900..109436 | - | 537 | WP_201896510.1 | Cardiolipin synthase | VF |
| I6I38_RS25370 () | 109447..111504 | - | 2058 | WP_201896610.1 | hypothetical protein | VF |
| I6I38_RS25375 () | 111662..112675 | - | 1014 | WP_201896511.1 | hypothetical protein | - |
| I6I38_RS25380 () | 112689..113948 | - | 1260 | WP_201896512.1 | conjugal transfer protein TrbA | - |
| I6I38_RS25385 () | 114142..114720 | - | 579 | WP_128865581.1 | hypothetical protein | - |
| I6I38_RS25390 () | 114717..116861 | - | 2145 | WP_201896513.1 | hypothetical protein | VF |
| I6I38_RS25395 () | 116926..117489 | - | 564 | WP_128865583.1 | conjugal transfer protein TraX | - |
| I6I38_RS25400 () | 117482..118708 | - | 1227 | WP_201896514.1 | conjugal transfer protein TraW | - |
| I6I38_RS25405 () | 118849..121923 | - | 3075 | WP_201896515.1 | ATP-binding protein | - |
| I6I38_RS25410 () | 121926..122531 | - | 606 | WP_201896516.1 | hypothetical protein | - |
| I6I38_RS25415 () | 122616..123017 | - | 402 | WP_127147005.1 | hypothetical protein | - |
| I6I38_RS25420 () | 123033..123563 | - | 531 | WP_010895872.1 | conjugal transfer protein TraQ | - |
| I6I38_RS25425 () | 123572..124315 | - | 744 | WP_201896517.1 | hypothetical protein | - |
| I6I38_RS25430 () | 124315..125547 | - | 1233 | WP_127147003.1 | conjugal transfer protein TraO | - |
| I6I38_RS25435 () | 125552..126559 | - | 1008 | WP_127147002.1 | hypothetical protein | VF |
| I6I38_RS25440 () | 126562..127236 | - | 675 | WP_127147001.1 | hypothetical protein | VF |
| I6I38_RS25445 () | 127329..127820 | - | 492 | WP_127147000.1 | hypothetical protein | - |
| I6I38_RS25450 () | 127830..131063 | - | 3234 | WP_201896518.1 | hypothetical protein | - |
| I6I38_RS25455 () | 131060..131197 | - | 138 | WP_201896519.1 | hypothetical protein | - |
| I6I38_RS25460 () | 131206..131472 | - | 267 | WP_201896520.1 | IcmT/TraK family protein | - |
| I6I38_RS25465 () | 131472..132629 | - | 1158 | WP_201896521.1 | hypothetical protein | VF |
| I6I38_RS25470 () | 132660..133448 | - | 789 | WP_201896522.1 | hypothetical protein | VF |
| I6I38_RS25475 () | 133445..133909 | - | 465 | WP_201896523.1 | DotD/TraH family lipoprotein | - |
| I6I38_RS25480 () | 134097..134603 | + | 507 | WP_201896524.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| I6I38_RS25485 () | 134925..136061 | - | 1137 | Protein_126 | hypothetical protein | VF |
| I6I38_RS25490 () | 136058..136726 | - | 669 | WP_201896525.1 | prepilin peptidase | - |
| I6I38_RS25495 () | 136726..137211 | - | 486 | WP_048795524.1 | hypothetical protein | VF |
| I6I38_RS25500 () | 137266..137856 | - | 591 | WP_201896526.1 | hypothetical protein | VF |
| I6I38_RS25505 () | 137892..139007 | - | 1116 | WP_201896527.1 | hypothetical protein | VF |
| I6I38_RS25510 () | 139004..140494 | - | 1491 | WP_201896528.1 | hypothetical protein | VF |
| I6I38_RS25515 () | 140500..141084 | - | 585 | WP_127146991.1 | hypothetical protein | VF |
| I6I38_RS25520 () | 141071..142375 | - | 1305 | WP_201896529.1 | type 4b pilus protein PilO2 | - |
| I6I38_RS25525 () | 142379..144013 | - | 1635 | WP_127146989.1 | hypothetical protein | VF |
| I6I38_RS25530 () | 144037..144462 | - | 426 | WP_127146988.1 | hypothetical protein | VF |
| I6I38_RS25535 () | 144462..145493 | - | 1032 | WP_201896530.1 | hypothetical protein | VF |
| I6I38_RS25540 () | 145836..146318 | - | 483 | WP_127146986.1 | antitermination protein NusG | - |
| I6I38_RS25545 () | 147478..148410 | + | 933 | WP_201896611.1 | Replication protein | - |
| I6I38_RS25550 () | 149202..149636 | - | 435 | Protein_139 | IS110 family transposase IS1663 | Transposase |
| I6I38_RS25555 () | 149782..151005 | - | 1224 | Protein_140 | IS91 family transposase ISVa3 | Transposase |
| I6I38_RS25560 () | 151017..151475 | - | 459 | WP_201896609.1 | hypothetical protein | - |
| I6I38_RS25565 () | 151654..152628 | - | 975 | WP_201896531.1 | hypothetical protein | - |
| I6I38_RS25570 () | 152752..153315 | - | 564 | WP_201896532.1 | transposase | - |
| I6I38_RS25575 () | 153353..153967 | - | 615 | WP_201896533.1 | DUF2913 family protein | - |
| I6I38_RS25580 () | 153996..154928 | - | 933 | WP_201896534.1 | hypothetical protein | VF |
| I6I38_RS25585 () | 155000..155884 | - | 885 | WP_201896535.1 | restriction endonuclease | - |
| I6I38_RS25590 () | 156349..157092 | + | 744 | WP_201896612.1 | tyrosine-type recombinase/integrase | - |
| I6I38_RS25595 () | 157267..157890 | + | 624 | WP_201896613.1 | AAA family ATPase | - |
| I6I38_RS25600 () | 157893..158132 | + | 240 | WP_201896536.1 | hypothetical protein | - |
| I6I38_RS25605 () | 158325..158615 | - | 291 | WP_201896537.1 | transcriptional regulator | - |
| I6I38_RS25610 () | 158824..159081 | - | 258 | Protein_151 | aminotransferase | - |
| I6I38_RS25615 () | 159223..160446 | - | 1224 | WP_201896538.1 | IS91 family transposase ISVa3 | Transposase |
| I6I38_RS25620 () | 160530..160643 | - | 114 | Protein_153 | IS256 family transposase IS285 | Transposase |
| I6I38_RS25625 () | 160686..162254 | - | 1569 | WP_201896539.1 | IS66 family transposase ISAba24 | Transposase |
| I6I38_RS25630 () | 162297..162650 | - | 354 | WP_201896540.1 | IS66 family transposase ISPa30 | Transposase |
| I6I38_RS25635 () | 163085..163633 | + | 549 | WP_201896541.1 | IS66 family transposase ISAba24 | Transposase |
| I6I38_RS25645 () | 164768..170152 | - | 5385 | WP_201896543.1 | hypothetical protein | - |
| I6I38_RS25650 () | 170209..171444 | - | 1236 | WP_201896544.1 | hypothetical protein | - |
| I6I38_RS25655 () | 171763..172158 | - | 396 | WP_201896545.1 | lysis protein | - |
| I6I38_RS25660 () | 172256..172702 | - | 447 | WP_201896546.1 | lysozyme | - |
| I6I38_RS25665 () | 172768..173028 | - | 261 | WP_201896547.1 | hypothetical protein | - |
| I6I38_RS25670 () | 173479..173894 | - | 416 | Protein_163 | IS256 family transposase ISEc39 | Transposase |
| I6I38_RS25675 () | 173966..174382 | + | 417 | Protein_164 | ATP-binding protein | - |
| I6I38_RS25680 () | 174512..174685 | - | 174 | WP_201896548.1 | hypothetical protein | - |
| I6I38_RS25685 () | 174743..175348 | - | 606 | WP_201896549.1 | DUF2913 family protein | - |
| I6I38_RS25690 () | 175385..175618 | - | 234 | WP_201896550.1 | hypothetical protein | - |
| I6I38_RS25695 () | 175632..175991 | - | 360 | WP_201896551.1 | transcriptional regulator | - |
| I6I38_RS25700 () | 175988..176302 | - | 315 | WP_201896552.1 | type II toxin-antitoxin system HigB family toxin | - |
| I6I38_RS25705 () | 176699..177139 | - | 441 | Protein_170 | IS91 family transposase ISVa3 | Transposase |
| I6I38_RS25710 () | 178118..178993 | + | 876 | WP_201896553.1 | hypothetical protein | - |
| I6I38_RS25715 () | 179444..180555 | + | 1112 | WP_201896554.1 | IS3 family transposase IS1400 | Transposase |
| I6I38_RS25720 () | 181430..182506 | + | 1077 | Protein_173 | IS3 family transposase | - |
| I6I38_RS25725 () | 182520..183401 | - | 882 | Protein_174 | IS630 family transposase ISEc33 | Transposase |
| I6I38_RS25730 () | 184000..184575 | - | 576 | WP_201896604.1 | Tyrosine recombinase XerC | VF |
| I6I38_RS25740 () | 186518..186721 | - | 204 | WP_201896556.1 | IS91 family transposase ISVa3 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|