MGE detailed information
MGE type: IScluster/Tn MGE length: 20997 bp
Accession: NZ_CP068090 Location: 4230633..4251629 Organism: Shigella boydii strain FDAARGOS_1139 Replicon: chromosome
Accession: NZ_CP068090 Location: 4230633..4251629 Organism: Shigella boydii strain FDAARGOS_1139 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6I96_RS21170 () | 4225701..4226342 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| I6I96_RS21175 () | 4226398..4227576 | - | 1179 | WP_000173497.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| I6I96_RS21180 () | 4227710..4228004 | + | 295 | Protein_4116 | DNA damage-inducible protein YebG | - |
| I6I96_RS21185 () | 4228071..4228427 | + | 357 | WP_001295500.1 | protein YebF | - |
| I6I96_RS21190 () | 4228754..4229413 | + | 660 | WP_000024738.1 | tellurite resistance TerB family protein | - |
| I6I96_RS21195 () | 4229622..4230608 | + | 987 | Protein_4119 | oligopeptidase B | - |
| I6I96_RS21205 () | 4231906..4232913 | + | 1008 | Protein_4121 | prolyl oligopeptidase family serine peptidase | - |
| I6I96_RS21210 () | 4232939..4234152 | + | 1214 | WP_134810244.1 | IS3 family transposase IS629 | Transposase |
| I6I96_RS21215 () | 4234259..4234921 | - | 663 | WP_000944260.1 | exodeoxyribonuclease X | - |
| I6I96_RS21220 () | 4234945..4235601 | - | 657 | WP_000011642.1 | carbon-nitrogen hydrolase family protein | - |
| I6I96_RS21225 () | 4235703..4235933 | - | 231 | WP_000916761.1 | DNA polymerase III subunit theta | - |
| I6I96_RS21230 () | 4236072..4236446 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| I6I96_RS21235 () | 4236450..4237317 | + | 868 | Protein_4127 | copper homeostasis membrane protein CopD | - |
| I6I96_RS21240 () | 4237330..4237671 | + | 342 | WP_000976476.1 | YebY family protein | - |
| - () | 4237699..4237932 | - | 234 | - | - | Antitoxin Detail |
| - () | 4237828..4237931 | + | 104 | - | - | Toxin Detail |
| I6I96_RS21245 () | 4238053..4238580 | - | 528 | Protein_4129 | hypothetical protein ; Integrase | Integrase |
| I6I96_RS21255 () | 4240013..4241114 | + | 1102 | Protein_4131 | IS3 family transposase IS600 | Transposase |
| I6I96_RS21260 () | 4241213..4241662 | - | 450 | Protein_4132 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS21265 () | 4241809..4242936 | + | 1128 | WP_001063816.1 | IS110 family transposase ISSso6 | Transposase |
| I6I96_RS21270 () | 4243229..4244821 | - | 1593 | WP_001072385.1 | IS66 family transposase ISEc43 | Transposase |
| I6I96_RS21275 () | 4244852..4245202 | - | 351 | WP_000624671.1 | IS66 family transposase IS682 | Transposase |
| I6I96_RS21280 () | 4245199..4245618 | - | 420 | WP_000435414.1 | IS66 family transposase IS682 | Transposase |
| I6I96_RS21285 () | 4245704..4245811 | - | 108 | Protein_4137 | cell division inhibition protein DicB | - |
| I6I96_RS21290 () | 4245822..4246241 | - | 420 | WP_078163765.1 | hypothetical protein | - |
| I6I96_RS21295 () | 4247043..4247044 | - | 2 | WP_094096853.1 | IS3 family transposase ISSd1 | Transposase |
| I6I96_RS21300 () | 4247480..4247659 | + | 180 | WP_001039895.1 | hypothetical protein | - |
| I6I96_RS21305 () | 4247660..4249366 | - | 1707 | WP_024259619.1 | E3 ubiquitin-protein ligase ipaH3 | VF |
| I6I96_RS21310 () | 4249696..4249812 | + | 117 | WP_000087865.1 | IS3 family transposase ISSd1 | Transposase |
| I6I96_RS21315 () | 4249846..4250543 | + | 698 | Protein_4143 | IS1 family transposase IS1X2 | Transposase |
| I6I96_RS21320 () | 4250560..4251629 | + | 1070 | Protein_4144 | IS3 family transposase IS600 | Transposase |
| I6I96_RS21325 () | 4252161..4252817 | + | 657 | WP_000812724.1 | protein-serine/threonine phosphatase | - |
| I6I96_RS21330 () | 4252818..4253009 | - | 192 | WP_000457842.1 | YebW family protein | - |
| I6I96_RS21335 () | 4253114..4253350 | - | 237 | WP_001295499.1 | DUF1480 family protein | - |
| I6I96_RS21340 () | 4253468..4254907 | - | 1440 | WP_000057025.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|