MGE detailed information
MGE type: IScluster/Tn MGE length: 21547 bp
Accession: NZ_CP068039 Location: 10237..31783 Organism: Escherichia coli strain U90 Replicon: plasmid pU90-4
Accession: NZ_CP068039 Location: 10237..31783 Organism: Escherichia coli strain U90 Replicon: plasmid pU90-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKF55_RS25555 () | 7471..8214 | + | 744 | WP_000205703.1 | conjugal transfer pilus acetylase TraX | - |
| JKF55_RS25560 () | 8269..8829 | + | 561 | WP_000139309.1 | fertility inhibition protein FinO | - |
| JKF55_RS25565 () | 8965..9180 | + | 216 | WP_032166857.1 | hypothetical protein | - |
| JKF55_RS25570 () | 9424..9510 | + | 87 | Protein_5 | endonuclease | - |
| JKF55_RS25575 () | 9691..10002 | - | 312 | WP_000765906.1 | hypothetical protein | - |
| JKF55_RS25580 () | 10237..11808 | - | 1572 | WP_000381443.1 | IS66 family transposase IS679 | Transposase |
| JKF55_RS25585 () | 11828..12175 | - | 348 | WP_000624618.1 | IS66 family transposase ISCro1 | Transposase |
| JKF55_RS25590 () | 12175..12825 | - | 651 | WP_000993956.1 | IS66 family transposase IS679 | Transposase |
| - () | 13010..13071 | - | 62 | NuclAT_0 | - | - |
| - () | 13010..13071 | - | 62 | NuclAT_0 | - | - |
| - () | 13010..13071 | - | 62 | NuclAT_0 | - | - |
| - () | 13010..13071 | - | 62 | NuclAT_0 | - | - |
| JKF55_RS25600 () | 14376..14516 | + | 141 | WP_064717426.1 | type I toxin-antitoxin system Hok family toxin | - |
| JKF55_RS25605 () | 14796..15053 | + | 258 | WP_000083834.1 | replication regulatory protein RepA | - |
| JKF55_RS25610 () | 15287..15361 | + | 75 | WP_032319616.1 | RepA leader peptide Tap | - |
| JKF55_RS25615 () | 15354..16376 | + | 1023 | WP_000840938.1 | replication initiation protein | - |
| JKF55_RS25620 () | 17292..17561 | + | 270 | WP_000079930.1 | hypothetical protein | Antitoxin Detail |
| JKF55_RS25625 () | 17558..17839 | + | 282 | WP_000969996.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JKF55_RS25630 () | 17885..18614 | + | 730 | Protein_17 | 3'-5' exonuclease | - |
| JKF55_RS25635 () | 18684..18929 | - | 246 | Protein_18 | IS3 family transposase IS911 | Transposase |
| JKF55_RS25640 () | 18946..20022 | - | 1077 | WP_039022834.1 | IS110 family transposase ISEc21 | Transposase |
| JKF55_RS25645 () | 20304..21163 | - | 860 | Protein_20 | IS3 family transposase | - |
| JKF55_RS25650 () | 21277..21673 | - | 397 | Protein_21 | ATP-binding protein | - |
| JKF55_RS25655 () | 22021..22395 | - | 375 | WP_015675362.1 | Heat-labile enterotoxin B chain | VF |
| JKF55_RS25660 () | 22392..23168 | - | 777 | WP_042634421.1 | Heat-labile enterotoxin A chain | VF |
| JKF55_RS25665 () | 24035..24747 | + | 713 | Protein_24 | hypothetical protein | - |
| JKF55_RS25670 () | 24959..25930 | + | 972 | WP_001078349.1 | IS481 family transposase ISEc18 | Transposase |
| JKF55_RS25675 () | 26022..26393 | - | 372 | Protein_26 | IS3 family transposase IS2 | Transposase |
| JKF55_RS25680 () | 26450..27131 | - | 682 | Protein_27 | IS3 family transposase ISKpn38 | Transposase |
| JKF55_RS25685 () | 27223..27986 | + | 764 | Protein_28 | IS3 family transposase IS2 | Transposase |
| JKF55_RS25690 () | 28114..28827 | - | 714 | WP_001423761.1 | IS3 family transposase ISKpn38 | Transposase |
| JKF55_RS25695 () | 29131..29829 | - | 699 | WP_107236375.1 | IS21 family transposase IS100kyp | Transposase |
| JKF55_RS25700 () | 29826..30835 | - | 1010 | Protein_31 | IS21 family transposase IS100kyp | Transposase |
| JKF55_RS25705 () | 30888..31987 | + | 1100 | Protein_32 | IS3 family transposase IS3F | Transposase |
| JKF55_RS25710 () | 32334..32828 | - | 495 | WP_000377907.1 | MarR family transcriptional regulator | - |
| JKF55_RS25715 () | 33255..33590 | - | 336 | Protein_34 | toxin-activating lysine-acyltransferase | - |
| JKF55_RS25720 () | 34041..34150 | + | 110 | Protein_35 | IS5/IS1182 family transposase | - |
| JKF55_RS25725 () | 34673..34923 | + | 251 | Protein_36 | type II toxin-antitoxin system ParD family antitoxin | - |
| JKF55_RS25730 () | 35567..36307 | + | 741 | WP_001066942.1 | tyrosine-type recombinase/integrase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|