MGE detailed information
MGE type: Prophage MGE length: 49475 bp
Accession: NZ_CP068035 Location: 593124..642598 Organism: Escherichia coli strain U90 Replicon: chromosome
Accession: NZ_CP068035 Location: 593124..642598 Organism: Escherichia coli strain U90 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JKF55_RS02745 () | 588825..592604 | + | 3780 | WP_000060921.1 | autotransporter assembly complex protein TamB | - |
| JKF55_RS02750 () | 592607..592948 | + | 342 | WP_001219160.1 | gamma-glutamylcyclotransferase | - |
| JKF55_RS02755 () | 593124..593366 | + | 243 | WP_000288983.1 | hypothetical protein | - |
| JKF55_RS02760 () | 593359..593592 | + | 234 | WP_071533696.1 | membrane protein insertion efficiency factor YidD | - |
| JKF55_RS02765 () | 593722..593862 | - | 141 | WP_000078920.1 | Hok/Gef family protein | - |
| JKF55_RS02770 () | 594054..594314 | - | 261 | WP_000488105.1 | ogr/Delta-like zinc finger family protein | - |
| JKF55_RS02775 () | 594357..595457 | - | 1101 | WP_000132818.1 | phage late control D family protein | - |
| JKF55_RS02780 () | 595615..596799 | + | 1185 | WP_000005390.1 | phage tail sheath family protein | - |
| JKF55_RS02785 () | 596799..597311 | + | 513 | WP_000290450.1 | phage major tail tube protein | - |
| JKF55_RS02790 () | 597366..597731 | + | 366 | WP_000665318.1 | tail protein | - |
| JKF55_RS02795 () | 597740..597895 | + | 156 | WP_000333495.1 | GpE family phage tail protein | - |
| JKF55_RS02800 () | 597882..600689 | + | 2808 | WP_169006876.1 | phage tail tape measure protein | - |
| JKF55_RS02805 () | 600702..601190 | + | 489 | WP_000979945.1 | phage tail protein | - |
| JKF55_RS02810 () | 601219..601818 | - | 600 | WP_000905061.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| JKF55_RS02815 () | 602597..603130 | + | 534 | WP_001697765.1 | tail fiber assembly protein | - |
| JKF55_RS02820 () | 603159..603686 | - | 528 | WP_001164111.1 | tail fiber assembly protein | - |
| JKF55_RS02825 () | 603690..606116 | - | 2427 | WP_112933619.1 | tail fiber protein | - |
| JKF55_RS02830 () | 606119..606649 | - | 531 | WP_000071739.1 | phage tail protein I | - |
| JKF55_RS02835 () | 606642..607538 | - | 897 | WP_001111925.1 | baseplate J/gp47 family protein | - |
| JKF55_RS02840 () | 607542..607871 | - | 330 | WP_001067548.1 | GPW/gp25 family protein | - |
| JKF55_RS02845 () | 607889..608455 | - | 567 | WP_077248893.1 | phage baseplate assembly protein V | - |
| JKF55_RS02850 () | 608467..609102 | - | 636 | WP_000356347.1 | phage virion morphogenesis protein | - |
| JKF55_RS02855 () | 609095..609562 | - | 468 | WP_000920602.1 | phage tail protein | - |
| JKF55_RS02860 () | 609700..610107 | - | 408 | WP_000780572.1 | DUF2570 domain-containing protein | - |
| JKF55_RS02865 () | 610104..610496 | - | 393 | WP_000072335.1 | M15 family metallopeptidase | - |
| JKF55_RS02870 () | 610493..610816 | - | 324 | WP_063100345.1 | phage holin family protein | - |
| JKF55_RS02875 () | 610819..611019 | - | 201 | WP_000864901.1 | tail protein X | - |
| JKF55_RS02880 () | 611019..611513 | - | 495 | WP_000063103.1 | head completion/stabilization protein | - |
| JKF55_RS02885 () | 611615..612415 | - | 801 | WP_000632347.1 | terminase | - |
| JKF55_RS02890 () | 612461..613513 | - | 1053 | WP_063118841.1 | phage major capsid protein, P2 family | - |
| JKF55_RS02895 () | 613536..614372 | - | 837 | WP_001262673.1 | GPO family capsid scaffolding protein | - |
| JKF55_RS02900 () | 614527..616278 | + | 1752 | WP_168994098.1 | terminase family protein | - |
| JKF55_RS02905 () | 616278..617324 | + | 1047 | WP_063107930.1 | phage portal protein | - |
| JKF55_RS02910 () | 617815..618339 | - | 525 | WP_048231033.1 | ead/Ea22-like family protein | - |
| JKF55_RS02915 () | 618403..618714 | - | 312 | WP_021563455.1 | plasmid partitioning/stability family protein | - |
| JKF55_RS02920 () | 618719..619678 | - | 960 | WP_000686524.1 | plasmid segregation protein ParM | - |
| JKF55_RS02925 () | 619755..622577 | - | 2823 | WP_064986858.1 | replication endonuclease | - |
| JKF55_RS02930 () | 622584..622949 | - | 366 | WP_064986857.1 | hypothetical protein | - |
| JKF55_RS02935 () | 622946..623563 | - | 618 | WP_074413547.1 | ash family protein | - |
| JKF55_RS02940 () | 623573..624109 | - | 537 | WP_077249062.1 | DNA-binding protein | - |
| JKF55_RS02945 () | 624139..624438 | - | 300 | WP_064986856.1 | ead/Ea22-like family protein | - |
| JKF55_RS02950 () | 624435..624680 | - | 246 | WP_000153674.1 | winged helix-turn-helix domain-containing protein | - |
| JKF55_RS02955 () | 624677..624880 | - | 204 | WP_001560998.1 | hypothetical protein | - |
| JKF55_RS02960 () | 624955..625080 | - | 126 | WP_040091107.1 | hypothetical protein | - |
| JKF55_RS02965 () | 625077..625319 | - | 243 | WP_000357024.1 | DUF4754 family protein | - |
| JKF55_RS02970 () | 625331..625609 | - | 279 | WP_040091109.1 | hypothetical protein | - |
| JKF55_RS02975 () | 625620..625970 | - | 351 | WP_064986855.1 | DUF4761 family protein | - |
| JKF55_RS02980 () | 626008..626433 | - | 426 | WP_001158283.1 | regulatory protein | - |
| JKF55_RS02985 () | 626542..626841 | + | 300 | WP_000108576.1 | helix-turn-helix transcriptional regulator | - |
| JKF55_RS02990 () | 626908..627903 | + | 996 | WP_001519231.1 | Putative sialic acid transporter ; Integrase | Integrase |
| JKF55_RS02995 () | 628195..628446 | + | 252 | WP_001223208.1 | type II toxin-antitoxin system antitoxin ChpS | Antitoxin Detail |
| JKF55_RS03000 () | 628440..628790 | + | 351 | WP_000239579.1 | endoribonuclease toxin ChpB | Toxin Detail |
| JKF55_RS03005 () | 628870..629400 | - | 531 | WP_000055072.1 | inorganic diphosphatase | - |
| JKF55_RS03010 () | 629710..630666 | + | 957 | WP_000265933.1 | galactofuranose ABC transporter substrate-binding protein YtfQ | - |
| JKF55_RS03015 () | 630976..632478 | + | 1503 | WP_000205793.1 | hypothetical protein | VF |
| JKF55_RS03020 () | 632492..633514 | + | 1023 | WP_001339490.1 | ABC transporter permease | - |
| JKF55_RS03025 () | 633501..634496 | + | 996 | WP_000595986.1 | sugar ABC transporter permease YjfF | - |
| JKF55_RS03030 () | 634529..635527 | - | 999 | WP_000853753.1 | class 1 fructose-bisphosphatase | - |
| JKF55_RS03035 () | 635703..637076 | + | 1374 | WP_001219792.1 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase | - |
| JKF55_RS03040 () | 637227..637778 | - | 552 | WP_000166270.1 | ribosome-associated protein | - |
| JKF55_RS03045 () | 637872..639224 | + | 1353 | WP_001162171.1 | metalloprotease PmbA | - |
| JKF55_RS03050 () | 639407..639793 | + | 387 | WP_001232240.1 | cytochrome b562 | - |
| JKF55_RS03055 () | 639838..640302 | - | 465 | WP_001106222.1 | anaerobic ribonucleoside-triphosphate reductase-activating protein | - |
| JKF55_RS03060 () | 640460..642598 | - | 2139 | WP_000187778.1 | anaerobic ribonucleoside-triphosphate reductase | - |
| JKF55_RS03065 () | 642992..644647 | - | 1656 | WP_001339491.1 | alpha,alpha-phosphotrehalase | - |
| JKF55_RS03070 () | 644697..646118 | - | 1422 | WP_001299664.1 | PTS trehalose transporter subunit IIBC | - |
| JKF55_RS03075 () | 646237..647184 | - | 948 | WP_001181324.1 | trehalose operon repressor TreR | - |
| JKF55_RS03080 () | 647369..647422 | + | 54 | WP_001387276.1 | mgtA regulatory leader peptide MgtL | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|