MGE detailed information
MGE type: Prophage MGE length: 23764 bp
Accession: NZ_CP067994 Location: 3574735..3598498 Organism: Escherichia coli strain CV601 Replicon: chromosome
Accession: NZ_CP067994 Location: 3574735..3598498 Organism: Escherichia coli strain CV601 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJT18_RS17380 () | 3570578..3573652 | + | 3075 | WP_000177906.1 | beta-galactosidase | - |
| JJT18_RS17385 () | 3573704..3574678 | + | 975 | Protein_3397 | lactose permease | - |
| JJT18_RS17390 () | 3574735..3575432 | + | 698 | Protein_3398 | IS1 family transposase IS1A | Transposase |
| JJT18_RS17395 () | 3575441..3575533 | + | 93 | Protein_3399 | sigma factor-binding protein Crl | - |
| JJT18_RS17400 () | 3575572..3576627 | - | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| JJT18_RS17405 () | 3576915..3578018 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JJT18_RS17410 () | 3578030..3579283 | + | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JJT18_RS17420 () | 3579855..3580196 | - | 342 | WP_000854672.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| JJT18_RS17425 () | 3580217..3580534 | - | 318 | WP_000070395.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| JJT18_RS17430 () | 3580553..3580774 | - | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| JJT18_RS17435 () | 3580783..3581259 | - | 477 | WP_000811693.1 | RadC family protein | - |
| JJT18_RS17440 () | 3581275..3581733 | - | 459 | WP_000211838.1 | antirestriction protein | - |
| JJT18_RS17445 () | 3581831..3582070 | - | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| JJT18_RS17450 () | 3582147..3582614 | - | 468 | WP_001547765.1 | hypothetical protein | - |
| JJT18_RS17455 () | 3582637..3583080 | - | 444 | WP_000824223.1 | hypothetical protein | - |
| JJT18_RS17460 () | 3583080..3583307 | - | 228 | WP_001548158.1 | hypothetical protein | - |
| JJT18_RS17465 () | 3583303..3583494 | - | 192 | Protein_3412 | DeoR family transcriptional regulator | - |
| JJT18_RS17470 () | 3583711..3584532 | - | 822 | WP_000197389.1 | DUF945 domain-containing protein | - |
| JJT18_RS17475 () | 3584624..3585487 | - | 864 | WP_001065553.1 | GTPase family protein | - |
| JJT18_RS17480 () | 3585816..3586709 | - | 894 | WP_000770246.1 | LysR family transcriptional regulator | - |
| JJT18_RS17485 () | 3586805..3587062 | + | 258 | Protein_3416 | IS3 family transposase ISEc52 | Transposase |
| JJT18_RS17490 () | 3587130..3588281 | + | 1152 | WP_001254938.1 | IS30 family transposase IS30D | Transposase |
| JJT18_RS17495 () | 3588291..3588716 | + | 426 | Protein_3418 | IS3 family transposase | - |
| JJT18_RS17500 () | 3589389..3590480 | + | 1092 | Protein_3419 | group II intron reverse transcriptase/maturase | - |
| JJT18_RS17505 () | 3590628..3591644 | - | 1017 | WP_010723085.1 | IS5 family transposase IS5D | Transposase |
| JJT18_RS17510 () | 3591852..3593255 | + | 1404 | WP_001393629.1 | S-methylmethionine permease | - |
| JJT18_RS17515 () | 3593242..3594174 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| JJT18_RS17520 () | 3594283..3595329 | - | 1047 | WP_000192349.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| JJT18_RS17525 () | 3595341..3595688 | - | 348 | Protein_3424 | ABC transporter permease subunit | - |
| JJT18_RS17530 () | 3595705..3596402 | - | 698 | Protein_3425 | IS1 family transposase IS1R | Transposase |
| JJT18_RS17535 () | 3596458..3596631 | + | 174 | Protein_3426 | IS30 family transposase | - |
| JJT18_RS17540 () | 3596641..3596889 | - | 249 | Protein_3427 | IS3 family transposase ISEhe3 | Transposase |
| JJT18_RS17545 () | 3596912..3597262 | - | 351 | WP_001030800.1 | type IV toxin-antitoxin system antitoxin YagB | - |
| JJT18_RS17550 () | 3597356..3598510 | - | 1155 | WP_010723086.1 | IS481 family transposase ISEc19 | Transposase |
| JJT18_RS17555 () | 3598805..3599713 | + | 909 | WP_001136613.1 | 2-keto-3-deoxygluconate aldolase | - |
| JJT18_RS17560 () | 3599728..3601695 | + | 1968 | WP_000151261.1 | xylonate dehydratase YagF | - |
| JJT18_RS17565 () | 3601922..3603304 | + | 1383 | WP_000192863.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|