MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP067426 Location: 5082990..5092341 Organism: Escherichia coli O22:H8 strain 154 Replicon: chromosome
Accession: NZ_CP067426 Location: 5082990..5092341 Organism: Escherichia coli O22:H8 strain 154 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI426_RS25195 (5078619) | 5078619..5079104 | + | 486 | WP_029488445.1 | antirestriction protein | - |
| JI426_RS25200 (5079120) | 5079120..5079596 | + | 477 | WP_001186727.1 | RadC family protein | - |
| JI426_RS25205 (5079665) | 5079665..5079886 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| JI426_RS25210 (5080049) | 5080049..5080417 | + | 369 | WP_001278232.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | - |
| JI426_RS25215 (5080507) | 5080507..5080881 | + | 375 | WP_000854753.1 | TA system toxin CbtA family protein | - |
| JI426_RS25220 (5080878) | 5080878..5081366 | + | 489 | WP_000777541.1 | DUF5983 family protein | - |
| JI426_RS25225 (5081378) | 5081378..5081575 | + | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| JI426_RS25230 (5081672) | 5081672..5082241 | + | 570 | WP_001290247.1 | DUF4942 domain-containing protein | - |
| JI426_RS25235 (5082990) | 5082990..5084528 | + | 1539 | WP_001187170.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JI426_RS25240 (5084894) | 5084894..5086228 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JI426_RS25245 (5086308) | 5086308..5088455 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JI426_RS25250 (5088514) | 5088514..5089971 | + | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| JI426_RS25255 (5090208) | 5090208..5091725 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| JI426_RS25260 (5091844) | 5091844..5092017 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JI426_RS25265 (5092045) | 5092045..5092341 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JI426_RS25270 (5092569) | 5092569..5092841 | - | 273 | WP_000405649.1 | GNAT family N-acetyltransferase | - |
| JI426_RS25275 (5092853) | 5092853..5093083 | - | 231 | WP_000371700.1 | 4Fe-4S mono-cluster protein YjdI | - |
| JI426_RS25280 (5093264) | 5093264..5094895 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| JI426_RS25285 (5094892) | 5094892..5095611 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |