MGE detailed information
MGE type: Prophage MGE length: 125084 bp
Accession: NZ_CP067426 Location: 2638690..2763773 Organism: Escherichia coli O22:H8 strain 154 Replicon: chromosome
Accession: NZ_CP067426 Location: 2638690..2763773 Organism: Escherichia coli O22:H8 strain 154 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JI426_RS13050 (2634486) | 2634486..2635181 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| JI426_RS13055 (2635134) | 2635134..2636426 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| JI426_RS13060 (2636585) | 2636585..2637199 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| JI426_RS13065 (2637242) | 2637242..2638096 | - | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| JI426_RS13070 (2638098) | 2638098..2638649 | - | 552 | WP_000069315.1 | dimethylsulfoxide reductase subunit B | - |
| JI426_RS13075 (2638690) | 2638690..2639853 | - | 1164 | WP_000051896.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JI426_RS13080 (2639973) | 2639973..2640080 | - | 108 | Protein_2569 | helix-turn-helix domain-containing protein | - |
| JI426_RS13085 (2640115) | 2640115..2640366 | - | 252 | WP_000497814.1 | DUF4222 domain-containing protein | - |
| JI426_RS13090 (2640414) | 2640414..2641094 | - | 681 | WP_040077670.1 | YqaJ viral recombinase family protein | - |
| JI426_RS13095 (2641091) | 2641091..2641876 | - | 786 | WP_000100822.1 | phage recombination protein Bet | - |
| JI426_RS13100 (2641882) | 2641882..2642178 | - | 297 | WP_000995034.1 | host-nuclease inhibitor Gam family protein | - |
| JI426_RS13105 (2642175) | 2642175..2644223 | - | 2049 | WP_050866382.1 | exodeoxyribonuclease VIII | - |
| JI426_RS13110 (2644332) | 2644332..2644718 | - | 387 | WP_047199899.1 | hypothetical protein | - |
| JI426_RS13115 (2644804) | 2644804..2645025 | - | 222 | WP_050876083.1 | cell division protein FtsZ | - |
| JI426_RS13120 (2645357) | 2645357..2645713 | - | 357 | WP_001005965.1 | hypothetical protein | - |
| JI426_RS13125 (2645745) | 2645745..2646458 | - | 714 | WP_033817297.1 | hypothetical protein | - |
| JI426_RS13130 (2646462) | 2646462..2646734 | - | 273 | WP_033817296.1 | hypothetical protein | - |
| JI426_RS13135 (2646712) | 2646712..2646886 | - | 175 | Protein_2580 | hypothetical protein | - |
| JI426_RS13140 (2647129) | 2647129..2647899 | - | 771 | WP_000239215.1 | helix-turn-helix transcriptional regulator | - |
| JI426_RS13145 (2647984) | 2647984..2648211 | + | 228 | WP_001068241.1 | hypothetical protein | - |
| JI426_RS13150 (2648355) | 2648355..2648651 | + | 297 | WP_000084293.1 | CII family transcriptional regulator | - |
| JI426_RS13155 (2648666) | 2648666..2648884 | + | 219 | WP_000438870.1 | hypothetical protein | - |
| JI426_RS13160 (2648905) | 2648905..2649981 | + | 1077 | WP_050876084.1 | DNA-binding protein | - |
| JI426_RS13165 (2649988) | 2649988..2650728 | + | 741 | WP_000790394.1 | ATP-binding protein | - |
| JI426_RS13170 (2650754) | 2650754..2651524 | + | 771 | WP_050876085.1 | DUF1627 domain-containing protein | - |
| JI426_RS13175 (2651539) | 2651539..2651970 | + | 432 | WP_077170686.1 | DUF977 family protein | - |
| JI426_RS13180 (2652003) | 2652003..2652677 | - | 675 | WP_050876087.1 | DUF4145 domain-containing protein | - |
| JI426_RS13185 (2652676) | 2652676..2652921 | + | 246 | WP_050876088.1 | hypothetical protein | - |
| JI426_RS13190 (2652969) | 2652969..2653274 | - | 306 | WP_072096802.1 | HigA family addiction module antitoxin | - |
| JI426_RS13195 (2653364) | 2653364..2653636 | - | 273 | WP_000049984.1 | hypothetical protein | - |
| JI426_RS13200 (2653690) | 2653690..2653947 | - | 258 | WP_001260979.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| JI426_RS13205 (2654275) | 2654275..2654940 | + | 666 | WP_044706398.1 | ORF6N domain-containing protein | - |
| JI426_RS13210 (2654995) | 2654995..2655405 | + | 411 | WP_050876090.1 | recombination protein NinB | - |
| JI426_RS13215 (2655402) | 2655402..2655524 | + | 123 | Protein_2596 | NinE family protein | - |
| JI426_RS13220 (2655617) | 2655617..2655907 | + | 291 | WP_000002253.1 | DUF1364 domain-containing protein | - |
| JI426_RS13225 (2655904) | 2655904..2656266 | + | 363 | WP_001008116.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JI426_RS13230 (2656266) | 2656266..2656460 | + | 195 | WP_050876091.1 | protein ninH | - |
| JI426_RS13235 (2656453) | 2656453..2656887 | + | 435 | WP_001204862.1 | antiterminator Q family protein | - |
| JI426_RS13240 (2657393) | 2657393..2658340 | + | 948 | WP_044191107.1 | hypothetical protein | VF |
| JI426_RS13245 (2658351) | 2658351..2658620 | + | 270 | WP_000722253.1 | hypothetical protein | VF |
| JI426_RS13250 (2659124) | 2659124..2661064 | + | 1941 | WP_135402050.1 | SASA family carbohydrate esterase | - |
| JI426_RS13255 (2661200) | 2661200..2661379 | + | 180 | WP_000142786.1 | DUF1378 family protein | - |
| JI426_RS13260 (2661420) | 2661420..2661665 | + | 246 | WP_001290208.1 | DUF826 domain-containing protein | - |
| JI426_RS13265 (2661743) | 2661743..2661958 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| JI426_RS13270 (2661963) | 2661963..2662496 | + | 534 | WP_040078639.1 | lysozyme | - |
| JI426_RS13275 (2662770) | 2662770..2663339 | + | 570 | WP_047091152.1 | phage antirepressor N-terminal domain-containing protein | - |
| JI426_RS13280 (2663339) | 2663339..2663488 | + | 150 | WP_000455406.1 | hypothetical protein | - |
| JI426_RS13285 (2663496) | 2663496..2663933 | + | 438 | WP_047091151.1 | lysis protein | - |
| JI426_RS13290 (2664136) | 2664136..2664678 | + | 543 | WP_001109015.1 | Rha family transcriptional regulator | - |
| JI426_RS13295 (2664837) | 2664837..2665088 | + | 252 | WP_072096860.1 | Gp49 family protein | - |
| JI426_RS13300 (2665488) | 2665488..2666294 | + | 807 | WP_040078180.1 | hypothetical protein | - |
| JI426_RS13305 (2666275) | 2666275..2667981 | + | 1707 | WP_040078182.1 | terminase | - |
| JI426_RS13310 (2667981) | 2667981..2670125 | + | 2145 | WP_040078184.1 | portal protein | - |
| JI426_RS13315 (2670283) | 2670283..2671290 | + | 1008 | WP_000345015.1 | hypothetical protein | - |
| JI426_RS13320 (2671314) | 2671314..2672528 | + | 1215 | WP_000214467.1 | N4-gp56 family major capsid protein | - |
| JI426_RS13325 (2672583) | 2672583..2672972 | + | 390 | WP_001140444.1 | hypothetical protein | - |
| JI426_RS13330 (2673023) | 2673023..2673484 | + | 462 | WP_001290743.1 | hypothetical protein | - |
| JI426_RS13335 (2673468) | 2673468..2674031 | + | 564 | WP_000829202.1 | hypothetical protein | - |
| JI426_RS13340 (2674031) | 2674031..2674681 | + | 651 | WP_001562654.1 | hypothetical protein | - |
| JI426_RS13345 (2674678) | 2674678..2677041 | + | 2364 | WP_137532953.1 | ISNCY family transposase KIS | Transposase |
| JI426_RS13350 (2677083) | 2677083..2677754 | + | 672 | WP_000547693.1 | DUF4376 domain-containing protein | - |
| JI426_RS13355 (2677833) | 2677833..2679458 | + | 1626 | WP_040077392.1 | hypothetical protein | - |
| JI426_RS13360 (2679455) | 2679455..2680723 | + | 1269 | WP_040077394.1 | DUF1983 domain-containing protein | - |
| JI426_RS13365 (2680738) | 2680738..2681016 | + | 279 | WP_000455635.1 | hypothetical protein | - |
| JI426_RS13370 (2681022) | 2681022..2681639 | + | 618 | WP_001373155.1 | hypothetical protein | - |
| JI426_RS13375 (2681763) | 2681763..2682497 | + | 735 | WP_040077398.1 | hypothetical protein | VF |
| JI426_RS13380 (2682728) | 2682728..2682868 | + | 141 | WP_000078907.1 | Hok/Gef family protein | - |
| JI426_RS13385 (2682925) | 2682925..2683326 | + | 402 | WP_000035557.1 | hypothetical protein | - |
| JI426_RS13390 (2683420) | 2683420..2684076 | + | 657 | WP_000509491.1 | hypothetical protein | - |
| JI426_RS13395 (2684079) | 2684079..2684525 | + | 447 | WP_000455652.1 | hypothetical protein | - |
| JI426_RS13400 (2684535) | 2684535..2684786 | + | 252 | WP_001561694.1 | hypothetical protein | - |
| JI426_RS13405 (2684797) | 2684797..2686062 | + | 1266 | WP_032276327.1 | hypothetical protein | - |
| JI426_RS13410 (2686132) | 2686132..2694516 | + | 8385 | WP_135402048.1 | LPD5 domain-containing protein | - |
| JI426_RS13415 (2694948) | 2694948..2695292 | - | 345 | WP_000756597.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| JI426_RS13420 (2695412) | 2695412..2695567 | - | 156 | WP_197733672.1 | Hok/Gef family protein | - |
| JI426_RS13425 (2695858) | 2695858..2696478 | - | 621 | Protein_2638 | DUF551 domain-containing protein | - |
| JI426_RS13430 (2696812) | 2696812..2696990 | - | 179 | Protein_2639 | hypothetical protein | - |
| JI426_RS13435 (2696992) | 2696992..2697699 | - | 708 | WP_001014734.1 | ead/Ea22-like family protein | - |
| JI426_RS13440 (2697696) | 2697696..2697917 | - | 222 | WP_000763353.1 | TraR/DksA family transcriptional regulator | - |
| JI426_RS13445 (2697965) | 2697965..2698608 | - | 644 | Protein_2642 | BRO family protein | - |
| JI426_RS13450 (2698865) | 2698865..2699488 | - | 624 | WP_040078578.1 | antA/AntB antirepressor family protein | - |
| JI426_RS13455 (2699756) | 2699756..2700025 | - | 270 | Protein_2644 | antA/AntB antirepressor family protein | - |
| JI426_RS13460 (2700450) | 2700450..2700554 | - | 105 | Protein_2645 | 4Fe-4S binding protein | - |
| JI426_RS13465 (2700565) | 2700565..2702988 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JI426_RS13470 (2703049) | 2703049..2705475 | - | 2427 | WP_000041534.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JI426_RS13475 (2705674) | 2705674..2705979 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| JI426_RS13480 (2706087) | 2706087..2706797 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JI426_RS13485 (2706800) | 2706800..2707360 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| JI426_RS13490 (2707395) | 2707395..2707736 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| JI426_RS13495 (2707954) | 2707954..2709182 | + | 1229 | WP_102384962.1 | IS3 family transposase IS2 | Transposase |
| JI426_RS13500 (2709207) | 2709207..2709533 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JI426_RS13505 (2709739) | 2709739..2710953 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| JI426_RS13510 (2710965) | 2710965..2711984 | + | 1020 | WP_000836079.1 | Zn-dependent oxidoreductase | - |
| JI426_RS13515 (2712172) | 2712172..2713452 | - | 1281 | WP_021523105.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| JI426_RS13520 (2713487) | 2713487..2713738 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| JI426_RS13525 (2713811) | 2713811..2716282 | - | 2472 | WP_000048363.1 | exonuclease | - |
| JI426_RS13530 (2716376) | 2716376..2716567 | - | 192 | WP_001083276.1 | lysis protein YdfD | - |
| JI426_RS13535 (2716564) | 2716564..2716752 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JI426_RS28490 (2717713) | 2717713..2717814 | - | 102 | Protein_2661 | protein YdfB | - |
| JI426_RS13545 (2717816) | 2717816..2717971 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| JI426_RS13550 (2718140) | 2718140..2718547 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| JI426_RS13555 (2718628) | 2718628..2718855 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| JI426_RS13560 (2718839) | 2718839..2719360 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| JI426_RS13565 (2719341) | 2719341..2720306 | + | 966 | WP_000054487.1 | hypothetical protein | - |
| JI426_RS13570 (2720347) | 2720347..2720745 | + | 399 | WP_001151242.1 | DUF977 family protein | - |
| JI426_RS13575 (2720948) | 2720948..2721613 | + | 666 | WP_033817453.1 | epoxyqueuosine reductase QueH | - |
| JI426_RS13580 (2721822) | 2721822..2722436 | + | 615 | WP_001265627.1 | hypothetical protein | - |
| JI426_RS13585 (2722439) | 2722439..2723461 | + | 1023 | WP_000915483.1 | DUF4868 domain-containing protein | - |
| JI426_RS13595 (2725206) | 2725206..2725595 | + | 390 | WP_016230970.1 | ISNCY family transposase ISRel10 | Transposase |
| JI426_RS13600 (2725614) | 2725614..2726297 | + | 684 | Protein_2673 | ISNCY family transposase ISCARN112 | Transposase |
| JI426_RS13605 (2726370) | 2726370..2726519 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| JI426_RS13610 (2726956) | 2726956..2727288 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| JI426_RS13615 (2727491) | 2727491..2727796 | - | 306 | WP_001326990.1 | protein YdfV | - |
| JI426_RS13620 (2727821) | 2727821..2728060 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JI426_RS13625 (2728060) | 2728060..2728347 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JI426_RS13630 (2728419) | 2728419..2728574 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JI426_RS13635 (2728791) | 2728791..2729042 | + | 252 | WP_000980994.1 | protein Rem | - |
| JI426_RS13640 (2729109) | 2729109..2729387 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| JI426_RS13645 (2729389) | 2729389..2730438 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| JI426_RS13650 (2730452) | 2730452..2731204 | + | 753 | WP_001047135.1 | antitermination protein | - |
| JI426_RS13655 (2731482) | 2731482..2731571 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| JI426_RS13660 (2731626) | 2731626..2731838 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| JI426_RS13665 (2732139) | 2732139..2732354 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| JI426_RS13670 (2732718) | 2732718..2732888 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| JI426_RS13675 (2733108) | 2733108..2733323 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JI426_RS13680 (2733328) | 2733328..2733639 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| JI426_RS13685 (2733636) | 2733636..2734169 | + | 534 | WP_001092971.1 | lysozyme | - |
| JI426_RS13690 (2734166) | 2734166..2734663 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JI426_RS13695 (2735026) | 2735026..2735238 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JI426_RS13700 (2735249) | 2735249..2735437 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JI426_RS13705 (2735509) | 2735509..2735739 | + | 231 | WP_000720962.1 | protein YnfN | - |
| JI426_RS13710 (2735911) | 2735911..2736085 | + | 175 | Protein_2695 | addiction module toxin, GnsA/GnsB family | - |
| JI426_RS13715 (2736237) | 2736237..2736647 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JI426_RS13720 (2736705) | 2736705..2736938 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JI426_RS13725 (2737327) | 2737327..2737872 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| JI426_RS13730 (2737847) | 2737847..2739772 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| JI426_RS13735 (2739769) | 2739769..2739975 | + | 207 | WP_000198149.1 | gpW family protein | - |
| JI426_RS13740 (2739972) | 2739972..2741573 | + | 1602 | WP_016235295.1 | phage portal protein | - |
| JI426_RS13745 (2741554) | 2741554..2742873 | + | 1320 | WP_001702225.1 | S49 family peptidase | - |
| JI426_RS13750 (2742883) | 2742883..2743215 | + | 333 | WP_001299443.1 | head decoration protein | - |
| JI426_RS13755 (2743271) | 2743271..2744296 | + | 1026 | WP_000063278.1 | major capsid protein | - |
| JI426_RS13760 (2744338) | 2744338..2744736 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| JI426_RS13765 (2744748) | 2744748..2745101 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| JI426_RS13770 (2745113) | 2745113..2745691 | + | 579 | WP_000975081.1 | phage tail protein | - |
| JI426_RS13775 (2745688) | 2745688..2746083 | + | 396 | WP_001554814.1 | phage minor tail U family protein | - |
| JI426_RS13780 (2746091) | 2746091..2746831 | + | 741 | WP_001405605.1 | phage tail protein | - |
| JI426_RS13785 (2746847) | 2746847..2747269 | + | 423 | WP_000479176.1 | phage minor tail protein G | - |
| JI426_RS13790 (2747251) | 2747251..2747685 | + | 435 | WP_000459457.1 | phage tail assembly protein T | - |
| JI426_RS13795 (2747678) | 2747678..2750257 | + | 2580 | WP_000840349.1 | phage tail tape measure protein | - |
| JI426_RS13800 (2750254) | 2750254..2750583 | + | 330 | WP_000847379.1 | phage tail protein | - |
| JI426_RS13805 (2750583) | 2750583..2751281 | + | 699 | WP_001152632.1 | phage minor tail protein L | - |
| JI426_RS13810 (2751287) | 2751287..2752030 | + | 744 | WP_000140728.1 | C40 family peptidase | - |
| JI426_RS13815 (2752027) | 2752027..2752599 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| JI426_RS13820 (2752659) | 2752659..2756072 | + | 3414 | WP_000515480.1 | host specificity protein J | - |
| JI426_RS13825 (2756143) | 2756143..2756742 | + | 600 | WP_001233090.1 | hypothetical protein | VF |
| JI426_RS13830 (2756807) | 2756807..2759890 | + | 3084 | WP_249869005.1 | phage tail protein | - |
| JI426_RS13835 (2759890) | 2759890..2760465 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| JI426_RS13840 (2760563) | 2760563..2761153 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JI426_RS13845 (2761470) | 2761470..2761703 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JI426_RS13850 (2761772) | 2761772..2761885 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| JI426_RS13855 (2762406) | 2762406..2763773 | + | 1368 | Protein_2724 | MHS family MFS transporter | - |
| JI426_RS13860 (2763862) | 2763862..2765322 | + | 1461 | WP_000527797.1 | mannitol dehydrogenase family protein | - |
| JI426_RS13865 (2765358) | 2765358..2765561 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JI426_RS13870 (2765739) | 2765739..2766425 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| JI426_RS13875 (2766514) | 2766514..2767260 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|