MGE detailed information
MGE type: Prophage MGE length: 74676 bp
Accession: NZ_CP067399 Location: 2305596..2380271 Organism: Escherichia coli strain XJW9B263 Replicon: chromosome
Accession: NZ_CP067399 Location: 2305596..2380271 Organism: Escherichia coli strain XJW9B263 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJF91_RS11310 (2301845) | 2301845..2304271 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| JJF91_RS11315 (2304470) | 2304470..2304775 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| JJF91_RS11320 (2304883) | 2304883..2305593 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| JJF91_RS11325 (2305596) | 2305596..2306156 | - | 561 | WP_044069240.1 | spermidine N1-acetyltransferase | - |
| JJF91_RS11330 (2306191) | 2306191..2306532 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| JJF91_RS11335 (2306667) | 2306667..2306993 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| JJF91_RS11340 (2307199) | 2307199..2308393 | + | 1195 | Protein_2226 | starvation-sensing protein RspA | - |
| JJF91_RS11345 (2308405) | 2308405..2309424 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| JJF91_RS11350 (2309612) | 2309612..2310892 | - | 1281 | WP_000876958.1 | hypothetical protein ; Integrase | Integrase |
| JJF91_RS11355 (2310927) | 2310927..2311052 | - | 126 | Protein_2229 | excisionase family protein | - |
| JJF91_RS11360 (2311107) | 2311107..2311784 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| JJF91_RS11365 (2311784) | 2311784..2312131 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JJF91_RS11370 (2312151) | 2312151..2313722 | + | 1572 | WP_029392005.1 | IS66 family transposase ISCro1 | Transposase |
| JJF91_RS11375 (2313754) | 2313754..2313885 | - | 132 | Protein_2233 | excisionase family protein | - |
| JJF91_RS11380 (2313958) | 2313958..2316429 | - | 2472 | Protein_2234 | 3'-5' exoribonuclease | - |
| JJF91_RS11385 (2316522) | 2316522..2316713 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| JJF91_RS11390 (2316710) | 2316710..2316898 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| JJF91_RS11395 (2317466) | 2317466..2317684 | - | 219 | WP_001171942.1 | protein YdfC | - |
| JJF91_RS24955 (2317714) | 2317714..2317842 | - | 129 | WP_000344964.1 | protein YdfB | - |
| JJF91_RS11400 (2317844) | 2317844..2317999 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| JJF91_RS11405 (2318166) | 2318166..2318573 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| JJF91_RS11410 (2318657) | 2318657..2318887 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| JJF91_RS11415 (2318871) | 2318871..2319392 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| JJF91_RS11420 (2319373) | 2319373..2320338 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| JJF91_RS11425 (2320379) | 2320379..2320801 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| JJF91_RS11430 (2320798) | 2320798..2321287 | + | 490 | Protein_2245 | class I SAM-dependent methyltransferase | - |
| JJF91_RS11435 (2321670) | 2321670..2323209 | - | 1540 | Protein_2246 | IS66 family transposase ISEc22 | Transposase |
| JJF91_RS11440 (2323258) | 2323258..2323605 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| JJF91_RS11445 (2323602) | 2323602..2324006 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| JJF91_RS11450 (2324228) | 2324228..2324649 | + | 422 | Protein_2249 | hypothetical protein | - |
| JJF91_RS11455 (2325305) | 2325305..2326327 | + | 1023 | Protein_2250 | ISNCY family transposase ISCARN112 | Transposase |
| JJF91_RS24725 (2326448) | 2326448..2326597 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| JJF91_RS11460 (2327034) | 2327034..2327366 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| JJF91_RS11465 (2327569) | 2327569..2327874 | - | 306 | WP_001326990.1 | protein YdfV | - |
| JJF91_RS11470 (2327899) | 2327899..2328138 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JJF91_RS11475 (2328138) | 2328138..2328425 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JJF91_RS11480 (2328497) | 2328497..2328652 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JJF91_RS11485 (2328869) | 2328869..2329120 | + | 252 | WP_000980994.1 | protein Rem | - |
| JJF91_RS11490 (2329187) | 2329187..2329465 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| JJF91_RS11495 (2329467) | 2329467..2330516 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| JJF91_RS11500 (2330530) | 2330530..2331000 | + | 471 | Protein_2260 | antitermination protein | - |
| JJF91_RS11505 (2331055) | 2331055..2331752 | + | 698 | WP_106423973.1 | IS1 family transposase | - |
| JJF91_RS11510 (2331766) | 2331766..2331870 | - | 105 | Protein_2262 | putative zinc-binding protein YnfU | - |
| JJF91_RS11515 (2332090) | 2332090..2332305 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| JJF91_RS11520 (2332310) | 2332310..2332621 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| JJF91_RS11525 (2332618) | 2332618..2333151 | + | 534 | WP_001092971.1 | lysozyme | - |
| JJF91_RS11530 (2333148) | 2333148..2333645 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| JJF91_RS11535 (2334008) | 2334008..2334220 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| JJF91_RS11540 (2334231) | 2334231..2334419 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| JJF91_RS11545 (2334422) | 2334422..2334487 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| JJF91_RS11550 (2334492) | 2334492..2334722 | + | 231 | WP_000720962.1 | protein YnfN | - |
| JJF91_RS11555 (2334894) | 2334894..2335067 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| JJF91_RS11560 (2335219) | 2335219..2335629 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| JJF91_RS11565 (2335687) | 2335687..2335920 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| JJF91_RS11570 (2336309) | 2336309..2336854 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| JJF91_RS11575 (2336829) | 2336829..2338754 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| JJF91_RS11580 (2338751) | 2338751..2338957 | + | 207 | WP_000198149.1 | gpW family protein | - |
| JJF91_RS11585 (2338954) | 2338954..2340555 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| JJF91_RS11590 (2340536) | 2340536..2341855 | + | 1320 | WP_000123218.1 | S49 family peptidase | - |
| JJF91_RS11595 (2341865) | 2341865..2342197 | + | 333 | WP_001295978.1 | head decoration protein | - |
| JJF91_RS11600 (2342254) | 2342254..2343279 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| JJF91_RS11605 (2343321) | 2343321..2343719 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| JJF91_RS11610 (2343731) | 2343731..2344084 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| JJF91_RS11615 (2344096) | 2344096..2344674 | + | 579 | WP_000975070.1 | phage tail protein | - |
| JJF91_RS11620 (2344671) | 2344671..2345066 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| JJF91_RS11625 (2345074) | 2345074..2345814 | + | 741 | WP_001349920.1 | phage tail protein | - |
| JJF91_RS11630 (2345830) | 2345830..2346252 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| JJF91_RS11635 (2346234) | 2346234..2346668 | + | 435 | WP_000459465.1 | phage tail assembly protein T | - |
| JJF91_RS11640 (2346661) | 2346661..2349222 | + | 2562 | WP_000840342.1 | phage tail tape measure protein | - |
| JJF91_RS11645 (2349219) | 2349219..2349548 | + | 330 | WP_000847379.1 | phage tail protein | - |
| JJF91_RS11650 (2349548) | 2349548..2350246 | + | 699 | WP_001152640.1 | phage minor tail protein L | - |
| JJF91_RS11655 (2350252) | 2350252..2350995 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| JJF91_RS11660 (2350992) | 2350992..2351564 | + | 573 | WP_000847669.1 | tail assembly protein | - |
| JJF91_RS11665 (2351625) | 2351625..2355122 | + | 3498 | WP_000515714.1 | host specificity protein J | - |
| JJF91_RS11670 (2355192) | 2355192..2355791 | + | 600 | WP_001230375.1 | hypothetical protein | VF |
| JJF91_RS11675 (2355856) | 2355856..2357523 | + | 1668 | Protein_2295 | prophage tail fiber N-terminal domain-containing protein | - |
| JJF91_RS11685 (2359343) | 2359343..2360191 | + | 849 | WP_000127649.1 | phage tail protein | - |
| JJF91_RS11690 (2360191) | 2360191..2360766 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| JJF91_RS11695 (2360864) | 2360864..2361454 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| JJF91_RS11700 (2361771) | 2361771..2362004 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| JJF91_RS11705 (2362073) | 2362073..2362186 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| JJF91_RS11710 (2362707) | 2362707..2364074 | + | 1368 | Protein_2302 | MHS family MFS transporter | - |
| JJF91_RS11715 (2364163) | 2364163..2365623 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| JJF91_RS11720 (2365658) | 2365658..2365861 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| JJF91_RS11725 (2366038) | 2366038..2366724 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| JJF91_RS11730 (2366813) | 2366813..2367559 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| JJF91_RS11735 (2367696) | 2367696..2369741 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| JJF91_RS11740 (2369785) | 2369785..2370303 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| JJF91_RS11745 (2370579) | 2370579..2370971 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| JJF91_RS11750 (2371226) | 2371226..2372116 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| JJF91_RS11755 (2372231) | 2372231..2372335 | - | 105 | WP_211180496.1 | protein MgtT | - |
| JJF91_RS11760 (2372335) | 2372335..2372430 | - | 96 | WP_000901367.1 | protein MgtS | - |
| JJF91_RS11765 (2372557) | 2372557..2373744 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| JJF91_RS11770 (2373939) | 2373939..2374837 | + | 899 | Protein_2314 | O-acetylserine/cysteine exporter | - |
| JJF91_RS11775 (2374868) | 2374868..2375086 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| JJF91_RS11780 (2375118) | 2375118..2375501 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| JJF91_RS11785 (2375521) | 2375521..2375955 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| JJF91_RS11790 (2376167) | 2376167..2376832 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| JJF91_RS11795 (2376857) | 2376857..2378047 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| JJF91_RS11800 (2378197) | 2378197..2379312 | - | 1116 | WP_000258591.1 | putative protein YneK | - |
| JJF91_RS11805 (2379390) | 2379390..2380271 | - | 882 | WP_000366501.1 | hypothetical protein | VF |
| JJF91_RS11810 (2380372) | 2380372..2381760 | + | 1389 | WP_000156615.1 | succinate-semialdehyde dehydrogenase | - |
| JJF91_RS11815 (2381824) | 2381824..2382750 | + | 927 | WP_000257409.1 | glutaminase B | - |
| JJF91_RS11820 (2382750) | 2382750..2383109 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| JJF91_RS11825 (2383182) | 2383182..2384168 | + | 987 | Protein_2325 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|